RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W IWR1Q07532 353 aaPredicted RBP8.31□□□□□ -1.08
NDE2YDL085W POL3P15436 1097 aa8.3□□□□□ -1.08
NDE2YDL085W PKC1P24583 1151 aa8.3□□□□□ -1.08
NDE2YDL085W YDJ1P25491 409 aaKnown RBP8.3□□□□□ -1.08
NDE2YDL085W YBL055CP34220 418 aaPredicted RBP8.3□□□□□ -1.08
NDE2YDL085W SHP1P34223 423 aa8.3□□□□□ -1.08
NDE2YDL085W CSG2P35206 410 aa8.3□□□□□ -1.08
NDE2YDL085W HEK2P38199 381 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
NDE2YDL085W SCD6P45978 349 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
NDE2YDL085W BRO1P48582 844 aa8.3□□□□□ -1.08
NDE2YDL085W YGL039WP53183 348 aaKnown RBP8.3□□□□□ -1.08
NDE2YDL085W PRP3Q03338 469 aaPredicted RBP8.3□□□□□ -1.08
NDE2YDL085W SPC24Q04477 213 aa8.3□□□□□ -1.08
NDE2YDL085W RGA2Q06407 1009 aa8.3□□□□□ -1.08
NDE2YDL085W CMS1Q07897 291 aaKnown RBP8.3□□□□□ -1.08
NDE2YDL085W NOB1Q08444 459 aaKnown RBP8.3□□□□□ -1.08
NDE2YDL085W IES4Q08561 116 aa8.3□□□□□ -1.08
NDE2YDL085W PDR1P12383 1068 aa8.29□□□□□ -1.08
NDE2YDL085W NIP1P32497 812 aaKnown RBP8.29□□□□□ -1.08
NDE2YDL085W NCL1P38205 684 aaKnown RBP8.29□□□□□ -1.08
NDE2YDL085W VPS29P38759 282 aa8.29□□□□□ -1.08
NDE2YDL085W END3P39013 349 aa8.29□□□□□ -1.08
NDE2YDL085W CPR7P47103 393 aa8.29□□□□□ -1.08
NDE2YDL085W YMR1P47147 688 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
NDE2YDL085W DRN1P53255 507 aaKnown RBP8.29□□□□□ -1.08
NDE2YDL085W TBF1Q02457 562 aa8.29□□□□□ -1.08
NDE2YDL085W VPS16Q03308 798 aa8.29□□□□□ -1.08
NDE2YDL085W VPS72Q03388 795 aa8.29□□□□□ -1.08
NDE2YDL085W FAR8Q05040 523 aa8.29□□□□□ -1.08
NDE2YDL085W COQ9Q05779 260 aa8.29□□□□□ -1.08
NDE2YDL085W CFT2Q12102 859 aaPredicted RBP8.29□□□□□ -1.08
NDE2YDL085W ERP3Q12403 225 aa8.29□□□□□ -1.08
NDE2YDL085W GIS3Q12418 502 aa8.29□□□□□ -1.08
NDE2YDL085W TY4A-HQ6Q5P6 413 aa8.29□□□□□ -1.08
NDE2YDL085W ADE3P07245 946 aaKnown RBP8.29□□□□□ -1.08
NDE2YDL085W SRV2P17555 526 aaKnown RBP8.29□□□□□ -1.08
NDE2YDL085W RME1P32338 300 aaKnown RBP8.29□□□□□ -1.08
NDE2YDL085W DPH2P32461 534 aa8.29□□□□□ -1.08
NDE2YDL085W ERC1P38767 581 aa8.29□□□□□ -1.08
NDE2YDL085W EAF5P39995 279 aa8.29□□□□□ -1.08
NDE2YDL085W AVT1P47082 602 aa8.29□□□□□ -1.08
NDE2YDL085W SUB1P54000 292 aaKnown RBP8.29□□□□□ -1.08
NDE2YDL085W GTR1Q00582 310 aa8.29□□□□□ -1.08
NDE2YDL085W TAF9Q05027 157 aa8.29□□□□□ -1.08
NDE2YDL085W HFI1Q12060 488 aa8.29□□□□□ -1.08
NDE2YDL085W DED1P06634 604 aaKnown RBP8.28□□□□□ -1.08
NDE2YDL085W PEP5P12868 1029 aa8.28□□□□□ -1.08
NDE2YDL085W COX11P19516 300 aaKnown RBP8.28□□□□□ -1.08
NDE2YDL085W DAL2P25335 343 aa8.28□□□□□ -1.08
NDE2YDL085W RRN6P32786 894 aa8.28□□□□□ -1.08
NDE2YDL085W MRX3P38172 270 aa8.28□□□□□ -1.08
NDE2YDL085W TMA22P47089 198 aaPredicted RBP8.28□□□□□ -1.08
NDE2YDL085W CUL3P53202 744 aa8.28□□□□□ -1.08
NDE2YDL085W SHR3Q02774 210 aa8.28□□□□□ -1.08
NDE2YDL085W PEX29Q03370 554 aa8.28□□□□□ -1.08
NDE2YDL085W KAR3P17119 729 aa8.27□□□□□ -1.09
NDE2YDL085W PRP4P20053 465 aaKnown RBP8.27□□□□□ -1.09
NDE2YDL085W VMA4P22203 233 aaKnown RBP8.27□□□□□ -1.09
NDE2YDL085W GCD6P32501 712 aaKnown RBP8.27□□□□□ -1.09
NDE2YDL085W YBR062CP38239 180 aa8.27□□□□□ -1.09
NDE2YDL085W DYS1P38791 387 aa8.27□□□□□ -1.09
NDE2YDL085W AIM21P40563 679 aa8.27□□□□□ -1.09
NDE2YDL085W TDA10P42938 290 aa8.27□□□□□ -1.09
NDE2YDL085W PHO86P46956 311 aa8.27□□□□□ -1.09
NDE2YDL085W ASN1P49089 572 aaKnown RBP8.27□□□□□ -1.09
NDE2YDL085W SLD5Q03406 294 aa8.27□□□□□ -1.09
NDE2YDL085W MSH6Q03834 1242 aa8.27□□□□□ -1.09
NDE2YDL085W YDR222WQ04925 415 aa8.27□□□□□ -1.09
NDE2YDL085W ECM7Q06200 448 aa8.27□□□□□ -1.09
NDE2YDL085W MAG2Q06436 670 aaKnown RBP8.27□□□□□ -1.09
NDE2YDL085W YLL058WQ12198 575 aa8.27□□□□□ -1.09
NDE2YDL085W AI5_BETAQ9ZZX0 354 aa8.27□□□□□ -1.09
NDE2YDL085W YER152CP10356 443 aa8.26□□□□□ -1.09
NDE2YDL085W SFL1P20134 766 aa8.26□□□□□ -1.09
NDE2YDL085W MRPL25P23369 157 aa8.26□□□□□ -1.09
NDE2YDL085W EFT1P32324 842 aaKnown RBP8.26□□□□□ -1.09
NDE2YDL085W CBF2P32504 956 aa8.26□□□□□ -1.09
NDE2YDL085W ABD1P32783 436 aaPredicted RBP8.26□□□□□ -1.09
NDE2YDL085W CCL1P37366 393 aa8.26□□□□□ -1.09
NDE2YDL085W SIC1P38634 284 aa8.26□□□□□ -1.09
NDE2YDL085W ATG36P46983 293 aa8.26□□□□□ -1.09
NDE2YDL085W DAS1P47005 663 aa8.26□□□□□ -1.09
NDE2YDL085W JJJ3P47138 172 aa8.26□□□□□ -1.09
NDE2YDL085W HOP2P53187 214 aa8.26□□□□□ -1.09
NDE2YDL085W YNL146WP53906 100 aa8.26□□□□□ -1.09
NDE2YDL085W CEF1Q03654 590 aaPredicted RBP8.26□□□□□ -1.09
NDE2YDL085W PPM1Q04081 328 aa8.26□□□□□ -1.09
NDE2YDL085W GPI13Q07830 1017 aa8.26□□□□□ -1.09
NDE2YDL085W TUB3P09734 445 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W TIM23P32897 222 aa8.25□□□□□ -1.09
NDE2YDL085W SKG6P32900 734 aaPredicted RBP8.25□□□□□ -1.09
NDE2YDL085W VHC1P38329 1120 aa8.25□□□□□ -1.09
NDE2YDL085W YMR134WP40207 237 aa8.25□□□□□ -1.09
NDE2YDL085W SBE2P42223 864 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W INP52P50942 1183 aa8.25□□□□□ -1.09
NDE2YDL085W YPL109CQ02981 657 aa8.25□□□□□ -1.09
NDE2YDL085W SXM1Q04175 944 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W IVY1Q04934 453 aa8.25□□□□□ -1.09
NDE2YDL085W LCB5Q06147 687 aaKnown RBP8.25□□□□□ -1.09
NDE2YDL085W YLR177WQ06251 628 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms