RNA–Protein interactions for RNA: YNL075W

IMP4, Transcript of Component of the SSU processome, yeast

Gene IMP4, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IMP4	YNL075W	PHO88	P38264	188 aa	Predicted RBP	4	□□□□□ -1.77
IMP4	YNL075W	RFC1	P38630	861 aa	Known RBP	4	□□□□□ -1.77
IMP4	YNL075W	KSP1	P38691	1029 aa	Known RBP	4	□□□□□ -1.77
IMP4	YNL075W	SHU2	P38957	223 aa		4	□□□□□ -1.77
IMP4	YNL075W	YAR028W	P39548	234 aa		4	□□□□□ -1.77
IMP4	YNL075W	ACF4	P47129	309 aa		4	□□□□□ -1.77
IMP4	YNL075W	BRE5	P53741	515 aa	Known RBP	4	□□□□□ -1.77
IMP4	YNL075W	YVH1	Q02256	364 aa	Known RBP	4	□□□□□ -1.77
IMP4	YNL075W	DUS4	Q06063	367 aa		4	□□□□□ -1.77
IMP4	YNL075W	YLR257W	Q06146	321 aa	Known RBP	4	□□□□□ -1.77
IMP4	YNL075W	TAD3	Q9URQ3	322 aa		4	□□□□□ -1.77
IMP4	YNL075W	RAD18	P10862	487 aa		3.99	□□□□□ -1.77
IMP4	YNL075W	SAM2	P19358	384 aa	Known RBP	3.99	□□□□□ -1.77
IMP4	YNL075W	CTS1	P29029	562 aa		3.99	□□□□□ -1.77
IMP4	YNL075W	SRP40	P32583	406 aa	Predicted RBP	3.99	□□□□□ -1.77
IMP4	YNL075W	BCS1	P32839	456 aa		3.99	□□□□□ -1.77
IMP4	YNL075W	MYO3	P36006	1272 aa		3.99	□□□□□ -1.77
IMP4	YNL075W	SHM2	P37291	469 aa	Known RBP	3.99	□□□□□ -1.77
IMP4	YNL075W	NEM1	P38757	446 aa		3.99	□□□□□ -1.77
IMP4	YNL075W	STM1	P39015	273 aa	Known RBP	3.99	□□□□□ -1.77
IMP4	YNL075W	AFG3	P39925	761 aa		3.99	□□□□□ -1.77
IMP4	YNL075W	RPS15	Q01855	142 aa	Known RBP	3.99	□□□□□ -1.77
IMP4	YNL075W	RMD1	Q03441	430 aa		3.99	□□□□□ -1.77
IMP4	YNL075W	ECM16	Q04217	1267 aa	Known RBP	3.99	□□□□□ -1.77
IMP4	YNL075W	SSF2	Q12153	453 aa	Predicted RBP	3.99	□□□□□ -1.77
IMP4	YNL075W	CHO2	P05374	869 aa	Known RBP	3.98	□□□□□ -1.77
IMP4	YNL075W	PRO3	P32263	286 aa	Known RBP	3.98	□□□□□ -1.77
IMP4	YNL075W	TIM23	P32897	222 aa		3.98	□□□□□ -1.77
IMP4	YNL075W	TGL1	P34163	548 aa		3.98	□□□□□ -1.77
IMP4	YNL075W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
IMP4	YNL075W	NMD3	P38861	518 aa	Known RBP	3.98	□□□□□ -1.77
IMP4	YNL075W	MON1	P53129	644 aa		3.98	□□□□□ -1.77
IMP4	YNL075W	FOL1	P53848	824 aa		3.98	□□□□□ -1.77
IMP4	YNL075W	BUL2	Q03758	920 aa	Known RBP	3.98	□□□□□ -1.77
IMP4	YNL075W	SPH1	Q06160	661 aa		3.98	□□□□□ -1.77
IMP4	YNL075W	CLF1	Q12309	687 aa	Predicted RBP	3.98	□□□□□ -1.77
IMP4	YNL075W	PNS1	Q12412	539 aa		3.98	□□□□□ -1.77
IMP4	YNL075W	NUC1	P08466	329 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	HEM1	P09950	548 aa	Predicted RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	SAM1	P10659	382 aa	Known RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	RIT1	P23796	513 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	SRO9	P25567	434 aa	Known RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	ANP1	P32629	500 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	SEC8	P32855	1065 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	SLD2	P34252	453 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	HSE1	P38753	452 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	VPS45	P38932	577 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	NOC2	P39744	710 aa	Known RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	VPS53	P47061	822 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	RPT6	Q01939	405 aa	Known RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	VPS30	Q02948	557 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	TMA64	Q04600	565 aa	Known RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	RSA3	Q05942	220 aa	Known RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	NKP2	Q06162	153 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	GUD1	Q07729	489 aa		3.97	□□□□□ -1.77
IMP4	YNL075W	HRK1	Q08732	759 aa	Known RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	MSC6	Q08818	692 aa	Known RBP	3.97	□□□□□ -1.77
IMP4	YNL075W	RAD50	P12753	1312 aa		3.96	□□□□□ -1.77
IMP4	YNL075W	POX1	P13711	748 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	ACE2	P21192	770 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	TKL1	P23254	680 aa	Known RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	YUR1	P26725	428 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	SEC20	P28791	383 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	RPL8B	P29453	256 aa	Known RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	MCM4	P30665	933 aa	Known RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	AIM26	P32858	118 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	TFC4	P33339	1025 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	MCR1	P36060	302 aa	Known RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	DBP7	P36120	742 aa	Known RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	CRG1	P38892	291 aa	RIP-Chip data	3.96	□□□□□ -1.78	not detected
IMP4	YNL075W	SKP2	P42843	763 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	ENV11	P53246	860 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	LSB1	P53281	241 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	RPL34A	P87262	121 aa	Predicted RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	SLD5	Q03406	294 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	MYO5	Q04439	1219 aa	Known RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	DUS3	Q06053	668 aa	Known RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	SPN1	Q06505	410 aa	Predicted RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	ISA1	Q07821	250 aa	Predicted RBP	3.96	□□□□□ -1.78
IMP4	YNL075W	RIM20	Q12033	661 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	ERP3	Q12403	225 aa		3.96	□□□□□ -1.78
IMP4	YNL075W	TY1B-A	O13527	1196 aa	Known RBP	3.95	□□□□□ -1.78
IMP4	YNL075W	TPM1	P17536	199 aa	Known RBP	3.95	□□□□□ -1.78
IMP4	YNL075W	MAK31	P23059	88 aa		3.95	□□□□□ -1.78
IMP4	YNL075W	SHP1	P34223	423 aa		3.95	□□□□□ -1.78
IMP4	YNL075W	RER2	P35196	286 aa		3.95	□□□□□ -1.78
IMP4	YNL075W	AAP1	P37898	856 aa	Known RBP	3.95	□□□□□ -1.78
IMP4	YNL075W	GRS1	P38088	690 aa	Known RBP	3.95	□□□□□ -1.78
IMP4	YNL075W	ALG2	P43636	503 aa		3.95	□□□□□ -1.78
IMP4	YNL075W	NOG1	Q02892	647 aa	Known RBP	3.95	□□□□□ -1.78
IMP4	YNL075W	YDR132C	Q03900	495 aa		3.95	□□□□□ -1.78
IMP4	YNL075W	UTP5	Q04177	643 aa	Known RBP	3.95	□□□□□ -1.78
IMP4	YNL075W	AHC1	Q12433	566 aa		3.95	□□□□□ -1.78
IMP4	YNL075W	TRM11	Q12463	433 aa		3.95	□□□□□ -1.78
IMP4	YNL075W	RTP1	Q12751	981 aa		3.95	□□□□□ -1.78
IMP4	YNL075W	VAS1	P07806	1104 aa	Known RBP	3.94	□□□□□ -1.78
IMP4	YNL075W	SNA3	P14359	133 aa		3.94	□□□□□ -1.78
IMP4	YNL075W	CDC3	P32457	520 aa	Known RBP	3.94	□□□□□ -1.78
IMP4	YNL075W	REG2	P38232	338 aa		3.94	□□□□□ -1.78
IMP4	YNL075W	TAT2	P38967	592 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms