RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W NAM7P30771 971 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W OAF1P39720 1047 aaPredicted RBP2.42□□□□□ -2.02
VPS8YAL002W GPG1P53130 126 aa2.42□□□□□ -2.02
VPS8YAL002W LRS4Q04087 347 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W NHX1Q04121 633 aa2.42□□□□□ -2.02
VPS8YAL002W YOR352WQ08816 343 aa2.42□□□□□ -2.02
VPS8YAL002W YTM1Q12024 460 aaPredicted RBP2.42□□□□□ -2.02
VPS8YAL002W TRM732Q03496 1420 aa2.42□□□□□ -2.02
VPS8YAL002W ATP4P05626 244 aa2.42□□□□□ -2.02
VPS8YAL002W APA1P16550 321 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W COX11P19516 300 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W YCL002CP25565 263 aa2.42□□□□□ -2.02
VPS8YAL002W NFU1P32860 256 aa2.42□□□□□ -2.02
VPS8YAL002W ENT3P47160 408 aa2.42□□□□□ -2.02
VPS8YAL002W GCV1P48015 400 aa2.42□□□□□ -2.02
VPS8YAL002W RNR4P49723 345 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W RPN7Q06103 429 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W RLP24Q07915 199 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W NUR1Q12066 484 aa2.42□□□□□ -2.02
VPS8YAL002W NHA1Q99271 985 aa2.42□□□□□ -2.02
VPS8YAL002W POL1P13382 1468 aa2.41□□□□□ -2.02
VPS8YAL002W TY3B-GQ99315 1547 aa2.41□□□□□ -2.02
VPS8YAL002W NAR1P23503 491 aaKnown RBP2.41□□□□□ -2.02
VPS8YAL002W KCC4P25389 1037 aa2.41□□□□□ -2.02
VPS8YAL002W SRP101P32916 621 aa2.41□□□□□ -2.02
VPS8YAL002W YIL108WP40483 696 aaKnown RBP2.41□□□□□ -2.02
VPS8YAL002W FOL2P51601 243 aaKnown RBP2.41□□□□□ -2.02
VPS8YAL002W MAL11P53048 616 aa2.41□□□□□ -2.02
VPS8YAL002W YGR021WP53212 290 aa2.41□□□□□ -2.02
VPS8YAL002W YPL277CQ08989 487 aa2.41□□□□□ -2.02
VPS8YAL002W MSH1P25846 959 aa2.41□□□□□ -2.02
VPS8YAL002W SEC65P29478 273 aa2.41□□□□□ -2.02
VPS8YAL002W GLY1P37303 387 aaKnown RBP2.41□□□□□ -2.02
VPS8YAL002W CCZ1P38273 704 aa2.41□□□□□ -2.02
VPS8YAL002W PPE1P38796 400 aa2.41□□□□□ -2.02
VPS8YAL002W PNT1P38969 423 aa2.41□□□□□ -2.02
VPS8YAL002W HOS3Q02959 697 aaKnown RBP2.41□□□□□ -2.02
VPS8YAL002W ATG33Q06485 197 aa2.41□□□□□ -2.02
VPS8YAL002W ENT1Q12518 454 aa2.41□□□□□ -2.02
VPS8YAL002W MDM12Q92328 271 aa2.41□□□□□ -2.02
VPS8YAL002W SSM4P40318 1319 aa2.41□□□□□ -2.02
VPS8YAL002W GDB1Q06625 1536 aa2.41□□□□□ -2.02
VPS8YAL002W DRS2P39524 1355 aa2.41□□□□□ -2.02
VPS8YAL002W MSC7P38694 644 aa2.41□□□□□ -2.02
VPS8YAL002W SET5P38890 526 aaKnown RBP2.41□□□□□ -2.02
VPS8YAL002W DUN1P39009 513 aa2.41□□□□□ -2.02
VPS8YAL002W IES5P40060 125 aa2.41□□□□□ -2.02
VPS8YAL002W ACM1Q08981 209 aa2.41□□□□□ -2.02
VPS8YAL002W SVS1Q12254 260 aa2.41□□□□□ -2.02
VPS8YAL002W ERP4Q12450 207 aa2.41□□□□□ -2.02
VPS8YAL002W NSI1Q12457 570 aa2.41□□□□□ -2.02
VPS8YAL002W PCL2P25693 308 aa2.4□□□□□ -2.02
VPS8YAL002W CDC48P25694 835 aaKnown RBP2.4□□□□□ -2.02
VPS8YAL002W HOG1P32485 435 aa2.4□□□□□ -2.02
VPS8YAL002W EMC3P36039 253 aa2.4□□□□□ -2.02
VPS8YAL002W PIP2P52960 996 aa2.4□□□□□ -2.02
VPS8YAL002W UBX4P54730 416 aa2.4□□□□□ -2.02
VPS8YAL002W RKM2Q03942 479 aa2.4□□□□□ -2.02
VPS8YAL002W TY1A-BLQ12266 440 aa2.4□□□□□ -2.02
VPS8YAL002W NOT3P06102 836 aaKnown RBP2.4□□□□□ -2.03
VPS8YAL002W HSC82P15108 705 aaKnown RBP2.4□□□□□ -2.03
VPS8YAL002W PDC5P16467 563 aaKnown RBP2.4□□□□□ -2.03
VPS8YAL002W SSH4P32343 579 aa2.4□□□□□ -2.03
VPS8YAL002W YHL012WP38709 493 aa2.4□□□□□ -2.03
VPS8YAL002W YIR007WP40566 764 aa2.4□□□□□ -2.03
VPS8YAL002W GTS1P40956 396 aa2.4□□□□□ -2.03
VPS8YAL002W LEM3P42838 414 aa2.4□□□□□ -2.03
VPS8YAL002W SLD3P53135 668 aa2.4□□□□□ -2.03
VPS8YAL002W SNP1Q00916 300 aaPredicted RBP2.4□□□□□ -2.03
VPS8YAL002W SGO1Q08490 590 aa2.4□□□□□ -2.03
VPS8YAL002W GAL1P04385 528 aa2.4□□□□□ -2.03
VPS8YAL002W RPS4AP0CX35 261 aaKnown RBP2.4□□□□□ -2.03
VPS8YAL002W RPS4BP0CX36 261 aaKnown RBP2.4□□□□□ -2.03
VPS8YAL002W RPD3P32561 433 aa2.4□□□□□ -2.03
VPS8YAL002W BLI1P35727 113 aa2.4□□□□□ -2.03
VPS8YAL002W JNM1P36224 373 aa2.4□□□□□ -2.03
VPS8YAL002W SAW1P39735 261 aa2.4□□□□□ -2.03
VPS8YAL002W YGR283CP53336 341 aaPredicted RBP2.4□□□□□ -2.03
VPS8YAL002W SDH1Q00711 640 aa2.4□□□□□ -2.03
VPS8YAL002W RRI2Q12348 645 aa2.4□□□□□ -2.03
VPS8YAL002W YOR1P53049 1477 aa2.39□□□□□ -2.03
VPS8YAL002W CYS3P31373 394 aaKnown RBP2.39□□□□□ -2.03
VPS8YAL002W CDC12P32468 407 aaKnown RBP2.39□□□□□ -2.03
VPS8YAL002W NNK1P36003 928 aa2.39□□□□□ -2.03
VPS8YAL002W HSL7P38274 827 aa2.39□□□□□ -2.03
VPS8YAL002W SLN1P39928 1220 aaPredicted RBP2.39□□□□□ -2.03
VPS8YAL002W HOS4P40480 1083 aa2.39□□□□□ -2.03
VPS8YAL002W RLP7P40693 322 aaKnown RBP2.39□□□□□ -2.03
VPS8YAL002W TAF1P46677 1066 aa2.39□□□□□ -2.03
VPS8YAL002W CWC22P53333 577 aaKnown RBP2.39□□□□□ -2.03
VPS8YAL002W TY1A-MR1Q04215 440 aa2.39□□□□□ -2.03
VPS8YAL002W YLR001CQ07895 862 aa2.39□□□□□ -2.03
VPS8YAL002W STU1P38198 1513 aa2.39□□□□□ -2.03
VPS8YAL002W DNF3Q12674 1656 aa2.39□□□□□ -2.03
VPS8YAL002W TRZ1P36159 838 aaPredicted RBP2.39□□□□□ -2.03
VPS8YAL002W MDR1P53258 950 aa2.39□□□□□ -2.03
VPS8YAL002W PUS7Q08647 676 aaKnown RBP2.39□□□□□ -2.03
VPS8YAL002W ENV7Q12003 364 aa2.39□□□□□ -2.03
VPS8YAL002W COQ2P32378 372 aa2.39□□□□□ -2.03
VPS8YAL002W YSC84P32793 468 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms