RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN1	YOL116W	CCC2	P38995	1004 aa		4.46	□□□□□ -1.7
MSN1	YOL116W	MET12	P46151	657 aa		4.46	□□□□□ -1.7
MSN1	YOL116W	VPS62	P53285	467 aa		4.46	□□□□□ -1.7
MSN1	YOL116W	OSH2	Q12451	1283 aa		4.46	□□□□□ -1.7
MSN1	YOL116W	TSC11	P40061	1430 aa		4.46	□□□□□ -1.7
MSN1	YOL116W	HIS5	P07172	385 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	STE11	P23561	717 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	EMC1	P25574	760 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	CDC48	P25694	835 aa	Known RBP	4.45	□□□□□ -1.7
MSN1	YOL116W	STE5	P32917	917 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	YRO2	P38079	344 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	SIT1	P39980	628 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	YER158C	P40095	573 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	GCV2	P49095	1034 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	MNN10	P50108	393 aa	Known RBP	4.45	□□□□□ -1.7
MSN1	YOL116W	ERP6	P53198	216 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	UTP8	P53276	713 aa	Known RBP	4.45	□□□□□ -1.7
MSN1	YOL116W	EAF1	Q06337	982 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	URN1	Q06525	465 aa	Known RBP	4.45	□□□□□ -1.7
MSN1	YOL116W	HMI1	Q12039	706 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	VTH1	P40438	1549 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	VTH2	P40890	1549 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	NTE1	Q04958	1679 aa		4.45	□□□□□ -1.7
MSN1	YOL116W	CDC6	P09119	513 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	SRP101	P32916	621 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	ALR2	P43553	858 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	IOC3	P43596	787 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	TAF1	P46677	1066 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	CCM1	P48237	864 aa	Predicted RBP	4.44	□□□□□ -1.7
MSN1	YOL116W	VPS30	Q02948	557 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	YLR224W	Q05947	369 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	ADY3	Q07732	790 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	FMP25	Q08023	583 aa		4.44	□□□□□ -1.7
MSN1	YOL116W	ARE1	P25628	610 aa		4.43	□□□□□ -1.7
MSN1	YOL116W	SHM2	P37291	469 aa	Known RBP	4.43	□□□□□ -1.7
MSN1	YOL116W	MCM6	P53091	1017 aa	Known RBP	4.43	□□□□□ -1.7
MSN1	YOL116W	SFB2	P53953	876 aa		4.43	□□□□□ -1.7
MSN1	YOL116W	YAP6	Q03935	383 aa		4.43	□□□□□ -1.7
MSN1	YOL116W	LCD1	Q04377	747 aa		4.43	□□□□□ -1.7
MSN1	YOL116W	CDA1	Q06702	301 aa		4.43	□□□□□ -1.7
MSN1	YOL116W	RPO21	P04050	1733 aa	Known RBP	4.43	□□□□□ -1.7
MSN1	YOL116W	NUP170	P38181	1502 aa		4.42	□□□□□ -1.7
MSN1	YOL116W	SPE1	P08432	466 aa		4.42	□□□□□ -1.7
MSN1	YOL116W	HSP60	P19882	572 aa	Known RBP	4.42	□□□□□ -1.7
MSN1	YOL116W	RPL8B	P29453	256 aa	Known RBP	4.42	□□□□□ -1.7
MSN1	YOL116W	TSL1	P38427	1098 aa	Known RBP	4.42	□□□□□ -1.7
MSN1	YOL116W	CHA4	P43634	648 aa		4.42	□□□□□ -1.7
MSN1	YOL116W	NNF1	P47149	201 aa		4.42	□□□□□ -1.7
MSN1	YOL116W	DNF2	Q12675	1612 aa		4.42	□□□□□ -1.7
MSN1	YOL116W	IRC20	Q06554	1556 aa		4.41	□□□□□ -1.7
MSN1	YOL116W	RAD4	P14736	754 aa		4.41	□□□□□ -1.7
MSN1	YOL116W	REC104	P33323	182 aa		4.41	□□□□□ -1.7
MSN1	YOL116W	LST4	P34239	828 aa		4.41	□□□□□ -1.7
MSN1	YOL116W	YBR238C	P38330	731 aa	Known RBP	4.41	□□□□□ -1.7
MSN1	YOL116W	PLB1	P39105	664 aa		4.41	□□□□□ -1.7
MSN1	YOL116W	HUL4	P40985	892 aa		4.41	□□□□□ -1.7
MSN1	YOL116W	PFD1	P46988	109 aa		4.41	□□□□□ -1.7
MSN1	YOL116W	RAI1	P53063	387 aa	Known RBP	4.41	□□□□□ -1.7
MSN1	YOL116W	GSF2	Q04697	403 aa	Known RBP	4.41	□□□□□ -1.7
MSN1	YOL116W	TMA10	Q06177	86 aa		4.41	□□□□□ -1.7
MSN1	YOL116W	RFA1	P22336	621 aa	Known RBP	4.4	□□□□□ -1.71
MSN1	YOL116W	CTS1	P29029	562 aa		4.4	□□□□□ -1.71
MSN1	YOL116W	HBS1	P32769	611 aa	Known RBP	4.4	□□□□□ -1.71
MSN1	YOL116W	NPP2	P39997	493 aa		4.4	□□□□□ -1.71
MSN1	YOL116W	TIM54	P47045	478 aa		4.4	□□□□□ -1.71
MSN1	YOL116W	YKE2	P52553	114 aa		4.4	□□□□□ -1.71
MSN1	YOL116W	YGR125W	P53273	1036 aa		4.4	□□□□□ -1.71
MSN1	YOL116W	DOP1	Q03921	1698 aa		4.4	□□□□□ -1.71
MSN1	YOL116W	ULS1	Q08562	1619 aa		4.39	□□□□□ -1.71
MSN1	YOL116W	MYO4	P32492	1471 aa		4.39	□□□□□ -1.71
MSN1	YOL116W	NOT3	P06102	836 aa	Known RBP	4.39	□□□□□ -1.71
MSN1	YOL116W	NPP1	P25353	742 aa		4.39	□□□□□ -1.71
MSN1	YOL116W	URM1	P40554	99 aa	Predicted RBP	4.39	□□□□□ -1.71
MSN1	YOL116W	UBX5	Q06682	500 aa		4.39	□□□□□ -1.71
MSN1	YOL116W	YDL124W	Q07551	312 aa	Known RBP	4.39	□□□□□ -1.71
MSN1	YOL116W	YPR071W	Q12346	211 aa		4.39	□□□□□ -1.71
MSN1	YOL116W	STH1	P32597	1359 aa		4.39	□□□□□ -1.71
MSN1	YOL116W	SPO14	P36126	1683 aa		4.38	□□□□□ -1.71
MSN1	YOL116W	SNQ2	P32568	1501 aa	Known RBP	4.38	□□□□□ -1.71
MSN1	YOL116W	CIT1	P00890	479 aa		4.38	□□□□□ -1.71
MSN1	YOL116W	TUB2	P02557	457 aa	Known RBP	4.38	□□□□□ -1.71
MSN1	YOL116W	HCM1	P25364	564 aa		4.38	□□□□□ -1.71
MSN1	YOL116W	TRM2	P33753	639 aa		4.38	□□□□□ -1.71
MSN1	YOL116W	YBR284W	P38150	797 aa		4.38	□□□□□ -1.71
MSN1	YOL116W	GGA2	P38817	585 aa	Known RBP	4.38	□□□□□ -1.71
MSN1	YOL116W	NUP157	P40064	1391 aa	Known RBP	4.38	□□□□□ -1.71
MSN1	YOL116W	YTA7	P40340	1379 aa		4.38	□□□□□ -1.71
MSN1	YOL116W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
MSN1	YOL116W	SED4	P25365	1065 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	AFR1	P33304	620 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	STE13	P33894	931 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	PET10	P36139	283 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	TOK1	P40310	691 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	NIT3	P49954	291 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	GUP2	Q08929	609 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	FLC1	Q08967	793 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	HBN1	Q96VH4	193 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	SNT2	P53127	1403 aa		4.37	□□□□□ -1.71
MSN1	YOL116W	DCG1	P32460	244 aa		4.36	□□□□□ -1.71
MSN1	YOL116W	NCS6	P53088	359 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms