RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W SPN1Q06505 410 aaPredicted RBP2□□□□□ -2.09
RTP1YMR185W AVO1Q08236 1176 aa2□□□□□ -2.09
RTP1YMR185W ALG6Q12001 544 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W APL4Q12028 832 aa2□□□□□ -2.09
RTP1YMR185W OSH2Q12451 1283 aa2□□□□□ -2.09
RTP1YMR185W RMP1Q12530 201 aa2□□□□□ -2.09
RTP1YMR185W MYO1P08964 1928 aa2□□□□□ -2.09
RTP1YMR185W SEC18P18759 758 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W ADP1P25371 1049 aa2□□□□□ -2.09
RTP1YMR185W MCM4P30665 933 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W ATG14P38270 344 aa2□□□□□ -2.09
RTP1YMR185W YSW1P38280 609 aa2□□□□□ -2.09
RTP1YMR185W CAJ1P39101 391 aa2□□□□□ -2.09
RTP1YMR185W EFM4P40516 257 aa2□□□□□ -2.09
RTP1YMR185W MSH4P40965 878 aaPredicted RBP2□□□□□ -2.09
RTP1YMR185W HUL4P40985 892 aa2□□□□□ -2.09
RTP1YMR185W ENV11P53246 860 aa2□□□□□ -2.09
RTP1YMR185W RMD1Q03441 430 aa2□□□□□ -2.09
RTP1YMR185W POB3Q04636 552 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W GFD1Q04839 188 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W OMS1Q06668 471 aa2□□□□□ -2.09
RTP1YMR185W NOB1Q08444 459 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W DCS2Q12123 353 aa2□□□□□ -2.09
RTP1YMR185W HKR1P41809 1802 aa1.99□□□□□ -2.09
RTP1YMR185W POM152P39685 1337 aa1.99□□□□□ -2.09
RTP1YMR185W RPS4AP0CX35 261 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W RPS4BP0CX36 261 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W RNA1P11745 407 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W CKI1P20485 582 aa1.99□□□□□ -2.09
RTP1YMR185W CDC10P25342 322 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W PCH2P38126 564 aa1.99□□□□□ -2.09
RTP1YMR185W SEA4P38164 1038 aa1.99□□□□□ -2.09
RTP1YMR185W RGD1P38339 666 aa1.99□□□□□ -2.09
RTP1YMR185W YHL008CP38750 627 aa1.99□□□□□ -2.09
RTP1YMR185W VID28P40547 921 aa1.99□□□□□ -2.09
RTP1YMR185W DAK2P43550 591 aa1.99□□□□□ -2.09
RTP1YMR185W ERG5P54781 538 aa1.99□□□□□ -2.09
RTP1YMR185W CWC15Q03772 175 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W GYL1Q04322 720 aa1.99□□□□□ -2.09
RTP1YMR185W RBA50Q04418 439 aa1.99□□□□□ -2.09
RTP1YMR185W VAC14Q06708 880 aa1.99□□□□□ -2.09
RTP1YMR185W TMA16Q08687 178 aa1.99□□□□□ -2.09
RTP1YMR185W CYB2P00175 591 aa1.99□□□□□ -2.09
RTP1YMR185W HXK1P04806 485 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W PFK2P16862 959 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
RTP1YMR185W CDC15P27636 974 aa1.99□□□□□ -2.09
RTP1YMR185W URA1P28272 314 aaPredicted RBP1.99□□□□□ -2.09
RTP1YMR185W PRO1P32264 428 aa1.99□□□□□ -2.09
RTP1YMR185W HIR1P32479 840 aa1.99□□□□□ -2.09
RTP1YMR185W GCG1P32656 232 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W STO1P34160 861 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W REI1P38344 393 aaPredicted RBP1.99□□□□□ -2.09
RTP1YMR185W CTM1P38818 585 aa1.99□□□□□ -2.09
RTP1YMR185W IOC3P43596 787 aa1.99□□□□□ -2.09
RTP1YMR185W RPS0BP46654 252 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W FOL2P51601 243 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W NCS2P53923 493 aaPredicted RBP1.99□□□□□ -2.09
RTP1YMR185W ADE16P54113 591 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W HCR1Q05775 265 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W EST2Q06163 884 aa1.99□□□□□ -2.09
RTP1YMR185W ATG23Q06671 453 aa1.99□□□□□ -2.09
RTP1YMR185W YOR059CQ08448 450 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W CEX1Q12453 761 aa1.99□□□□□ -2.09
RTP1YMR185W SEC39Q12745 709 aa1.99□□□□□ -2.09
RTP1YMR185W PGA3Q12746 312 aaKnown RBP1.99□□□□□ -2.09
RTP1YMR185W RPB2P08518 1224 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W SRB4P32569 687 aa1.98□□□□□ -2.09
RTP1YMR185W SAP190P36123 1033 aa1.98□□□□□ -2.09
RTP1YMR185W SIC1P38634 284 aa1.98□□□□□ -2.09
RTP1YMR185W NOC2P39744 710 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W NIT1P40447 199 aa1.98□□□□□ -2.09
RTP1YMR185W YJR079WP47126 109 aa1.98□□□□□ -2.09
RTP1YMR185W ELA1P53861 379 aaPredicted RBP1.98□□□□□ -2.09
RTP1YMR185W UBP16Q02863 499 aa1.98□□□□□ -2.09
RTP1YMR185W NGL3Q03210 505 aa1.98□□□□□ -2.09
RTP1YMR185W ABP140Q08641 628 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W GET3Q12154 354 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W SNU66Q12420 587 aaPredicted RBP1.98□□□□□ -2.09
RTP1YMR185W TUS1Q06412 1307 aa1.98□□□□□ -2.09
RTP1YMR185W RAD3P06839 778 aa1.98□□□□□ -2.09
RTP1YMR185W ALG1P16661 449 aa1.98□□□□□ -2.09
RTP1YMR185W SWI4P25302 1093 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W GRX1P25373 110 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W RER2P35196 286 aa1.98□□□□□ -2.09
RTP1YMR185W SWH1P35845 1188 aa1.98□□□□□ -2.09
RTP1YMR185W RPN10P38886 268 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W SPT8P38915 602 aa1.98□□□□□ -2.09
RTP1YMR185W BOL3P39724 118 aa1.98□□□□□ -2.09
RTP1YMR185W MAD1P40957 749 aa1.98□□□□□ -2.09
RTP1YMR185W THI6P41835 540 aa1.98□□□□□ -2.09
RTP1YMR185W FYV8P46949 817 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W ENP2P48234 707 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W PRP3Q03338 469 aaPredicted RBP1.98□□□□□ -2.09
RTP1YMR185W UTP5Q04177 643 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W RRB1Q04225 511 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W RPN7Q06103 429 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W PPM2Q08282 695 aa1.98□□□□□ -2.09
RTP1YMR185W PLP2Q12017 286 aa1.98□□□□□ -2.09
RTP1YMR185W RIO1Q12196 484 aaKnown RBP1.98□□□□□ -2.09
RTP1YMR185W RUD3Q12234 484 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 163.5 ms