RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	GPD1	Q00055	391 aa	Known RBP	1.81	□□□□□ -2.12
YCS4	YLR272C	SDH1	Q00711	640 aa		1.81	□□□□□ -2.12
YCS4	YLR272C	HEH2	Q03281	663 aa		1.81	□□□□□ -2.12
YCS4	YLR272C	NHX1	Q04121	633 aa		1.81	□□□□□ -2.12
YCS4	YLR272C	BLS1	Q06071	122 aa		1.81	□□□□□ -2.12
YCS4	YLR272C	PLC1	P32383	869 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	MAF1	P41910	395 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	ZAP1	P47043	880 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	MSB3	P48566	633 aa	Predicted RBP	1.8	□□□□□ -2.12
YCS4	YLR272C	DAM1	P53267	343 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	HOL1	P53389	586 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	PPM2	Q08282	695 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	YPL066W	Q12194	479 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	PTP2	P29461	750 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	KTR2	P33550	425 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	EXO5	P38289	585 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	YNL195C	P40168	261 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	YIR007W	P40566	764 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	TAF1	P46677	1066 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	SSY5	P47002	699 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	VPS53	P47061	822 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	SLD3	P53135	668 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	CTR9	P89105	1077 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	GTR1	Q00582	310 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	GNT1	Q12096	491 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	PGI1	P12709	554 aa	Known RBP	1.8	□□□□□ -2.12
YCS4	YLR272C	IMG2	P25642	146 aa	Predicted RBP	1.8	□□□□□ -2.12
YCS4	YLR272C	TRK2	P28584	889 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	TPD3	P31383	635 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	SSH4	P32343	579 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	BEM3	P32873	1128 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	RPT3	P33298	428 aa	Known RBP	1.8	□□□□□ -2.12
YCS4	YLR272C	ABZ1	P37254	787 aa	Predicted RBP	1.8	□□□□□ -2.12
YCS4	YLR272C	RGD1	P38339	666 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	PEX8	P53248	589 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	RCM1	P53972	490 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	LCD1	Q04377	747 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	XYL2	Q07993	356 aa		1.8	□□□□□ -2.12
YCS4	YLR272C	CWC2	Q12046	339 aa	Predicted RBP	1.8	□□□□□ -2.12
YCS4	YLR272C	SPS1	P08458	490 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	DIT1	P21623	536 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	RSC6	P25632	483 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	CDC60	P26637	1090 aa	Known RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	RPS7A	P26786	190 aa	Known RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	CHS3	P29465	1165 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	YHR020W	P38708	688 aa	Known RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	LYS14	P40971	790 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	CCM1	P48237	864 aa	Predicted RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	MEC3	Q02574	474 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	MTQ2	Q03920	221 aa	Predicted RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	GYL1	Q04322	720 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	RSA3	Q05942	220 aa	Known RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	HSL7	P38274	827 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	MTG2	P38860	518 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	TMA108	P40462	946 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	RLP7	P40693	322 aa	Known RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	ERR3	P42222	437 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	YMR206W	Q03695	313 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	ARP9	Q05123	467 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	COG4	Q06096	861 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	TPK1	P06244	397 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	GLN4	P13188	809 aa	Known RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	BUD6	P41697	788 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	SMK1	P41808	388 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	DUS1	P53759	423 aa	Known RBP	1.79	□□□□□ -2.12
YCS4	YLR272C	UGO1	Q03327	502 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	OMS1	Q06668	471 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	YOR389W	Q08912	624 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	COX17	Q12287	69 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	SWM1	Q12379	170 aa		1.79	□□□□□ -2.12
YCS4	YLR272C	RPL11A	P0C0W9	174 aa	Known RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	CHS2	P14180	963 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	DPB3	P27344	201 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	MRPL36	P36531	177 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	APT2	P36973	181 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	CBR1	P38626	284 aa	Known RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	CKB2	P38930	258 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	OAF1	P39720	1047 aa	Predicted RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	SCS2	P40075	244 aa	Known RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	NDE1	P40215	560 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	UBP7	P40453	1071 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	YGR130C	P53278	816 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	SSL1	Q04673	461 aa	Predicted RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	YTM1	Q12024	460 aa	Predicted RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	RPL11B	Q3E757	174 aa	Predicted RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	YLR302C	O13544	120 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	VMA4	P22203	233 aa	Known RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	CLB4	P24871	460 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	PGS1	P25578	521 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	SLA1	P32790	1244 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	PXA2	P34230	853 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	KHA1	P40309	873 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	MNT3	P40549	630 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	NOG2	P53742	486 aa	Known RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	MDM1	Q01846	1127 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	ATG33	Q06485	197 aa		1.78	□□□□□ -2.12
YCS4	YLR272C	RPS21B	Q3E754	87 aa	Known RBP	1.78	□□□□□ -2.12
YCS4	YLR272C	DBP2	P24783	546 aa	Known RBP	1.78	□□□□□ -2.13
YCS4	YLR272C	TEF4	P36008	412 aa	Known RBP	1.78	□□□□□ -2.13
YCS4	YLR272C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	1.78	□□□□□ -2.13	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms