RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W GUP2Q08929 609 aa2.65□□□□□ -1.99
CFT2YLR115W YOR093CQ12275 1648 aa2.65□□□□□ -1.99
CFT2YLR115W YCF1P39109 1515 aaKnown RBP2.65□□□□□ -1.99
CFT2YLR115W ADE8P04161 214 aa2.64□□□□□ -1.99
CFT2YLR115W NOT3P06102 836 aaKnown RBP2.64□□□□□ -1.99
CFT2YLR115W PFK1P16861 987 aaKnown RBP2.64□□□□□ -1.99
CFT2YLR115W RPL8BP29453 256 aaKnown RBP2.64□□□□□ -1.99
CFT2YLR115W IOC3P43596 787 aa2.64□□□□□ -1.99
CFT2YLR115W RPD3P32561 433 aa2.64□□□□□ -1.99
CFT2YLR115W YRO2P38079 344 aa2.64□□□□□ -1.99
CFT2YLR115W AIM21P40563 679 aa2.64□□□□□ -1.99
CFT2YLR115W ERG5P54781 538 aa2.64□□□□□ -1.99
CFT2YLR115W LCD1Q04377 747 aa2.64□□□□□ -1.99
CFT2YLR115W PRP9P19736 530 aaKnown RBP2.63□□□□□ -1.99
CFT2YLR115W YHR020WP38708 688 aaKnown RBP2.63□□□□□ -1.99
CFT2YLR115W ALR2P43553 858 aa2.63□□□□□ -1.99
CFT2YLR115W HDA1P53973 706 aa2.63□□□□□ -1.99
CFT2YLR115W CTF4Q01454 927 aa2.63□□□□□ -1.99
CFT2YLR115W UBX5Q06682 500 aa2.63□□□□□ -1.99
CFT2YLR115W HBN1Q96VH4 193 aa2.63□□□□□ -1.99
CFT2YLR115W TOP1P04786 769 aa2.63□□□□□ -1.99
CFT2YLR115W YBR284WP38150 797 aa2.63□□□□□ -1.99
CFT2YLR115W WRS1Q12109 432 aaKnown RBP2.63□□□□□ -1.99
CFT2YLR115W YPR071WQ12346 211 aa2.63□□□□□ -1.99
CFT2YLR115W TOP3P13099 656 aa2.62□□□□□ -1.99
CFT2YLR115W HRR25P29295 494 aaKnown RBP2.62□□□□□ -1.99
CFT2YLR115W REC104P33323 182 aa2.62□□□□□ -1.99
CFT2YLR115W PET10P36139 283 aa2.62□□□□□ -1.99
CFT2YLR115W CCM1P48237 864 aaPredicted RBP2.62□□□□□ -1.99
CFT2YLR115W TUB3P09734 445 aaKnown RBP2.62□□□□□ -1.99
CFT2YLR115W MSD1P15179 658 aaKnown RBP2.62□□□□□ -1.99
CFT2YLR115W ORC1P54784 914 aaPredicted RBP2.62□□□□□ -1.99
CFT2YLR115W EAF1Q06337 982 aa2.62□□□□□ -1.99
CFT2YLR115W YLR040CQ07988 224 aa2.62□□□□□ -1.99
CFT2YLR115W SSK2P53599 1579 aa2.62□□□□□ -1.99
CFT2YLR115W GEA2P39993 1459 aaKnown RBP2.62□□□□□ -1.99
CFT2YLR115W SED4P25365 1065 aa2.61□□□□□ -1.99
CFT2YLR115W SEC21P32074 935 aaKnown RBP2.61□□□□□ -1.99
CFT2YLR115W CTF8P38877 133 aa2.61□□□□□ -1.99
CFT2YLR115W SDP1P40479 209 aa2.61□□□□□ -1.99
CFT2YLR115W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
CFT2YLR115W NAN1Q02931 896 aaKnown RBP2.61□□□□□ -1.99
CFT2YLR115W ENV7Q12003 364 aa2.61□□□□□ -1.99
CFT2YLR115W TRM13Q12383 476 aa2.61□□□□□ -1.99
CFT2YLR115W MMS1Q06211 1407 aa2.61□□□□□ -1.99
CFT2YLR115W TRP4P07285 380 aaPredicted RBP2.61□□□□□ -1.99
CFT2YLR115W RAD4P14736 754 aa2.61□□□□□ -1.99
CFT2YLR115W RAD53P22216 821 aa2.61□□□□□ -1.99
CFT2YLR115W ERP6P53198 216 aa2.61□□□□□ -1.99
CFT2YLR115W YKR011CQ02209 353 aa2.61□□□□□ -1.99
CFT2YLR115W TAF8Q03750 510 aa2.61□□□□□ -1.99
CFT2YLR115W SPO75Q07798 868 aa2.61□□□□□ -1.99
CFT2YLR115W RPO31P04051 1460 aa2.61□□□□□ -1.99
CFT2YLR115W URA1P28272 314 aaPredicted RBP2.6□□□□□ -1.99
CFT2YLR115W EFT1P32324 842 aaKnown RBP2.6□□□□□ -1.99
CFT2YLR115W TYE7P33122 291 aaPredicted RBP2.6□□□□□ -1.99
CFT2YLR115W TPO2P53283 614 aa2.6□□□□□ -1.99
CFT2YLR115W PRP4P20053 465 aaKnown RBP2.6□□□□□ -1.99
CFT2YLR115W CDC11P32458 415 aa2.6□□□□□ -1.99
CFT2YLR115W BET3P36149 193 aa2.6□□□□□ -1.99
CFT2YLR115W YIL108WP40483 696 aaKnown RBP2.6□□□□□ -1.99
CFT2YLR115W CEP3P40969 608 aa2.6□□□□□ -1.99
CFT2YLR115W AIM39Q08223 395 aa2.6□□□□□ -1.99
CFT2YLR115W UBP6P43593 499 aaKnown RBP2.59□□□□□ -1.99
CFT2YLR115W MRPS35P53292 345 aa2.59□□□□□ -1.99
CFT2YLR115W CAD1P24813 409 aaKnown RBP2.59□□□□□ -1.99
CFT2YLR115W ARE1P25628 610 aa2.59□□□□□ -1.99
CFT2YLR115W CTF13P35203 478 aa2.59□□□□□ -1.99
CFT2YLR115W MOH1P38191 138 aa2.59□□□□□ -1.99
CFT2YLR115W GYP8P43570 497 aa2.59□□□□□ -1.99
CFT2YLR115W YOL073CQ08232 322 aa2.59□□□□□ -1.99
CFT2YLR115W FLC1Q08967 793 aa2.59□□□□□ -1.99
CFT2YLR115W HAL9Q12180 1030 aa2.59□□□□□ -1.99
CFT2YLR115W TAD3Q9URQ3 322 aa2.59□□□□□ -1.99
CFT2YLR115W DNF2Q12675 1612 aa2.59□□□□□ -2
CFT2YLR115W CIT1P00890 479 aa2.58□□□□□ -2
CFT2YLR115W HSP60P19882 572 aaKnown RBP2.58□□□□□ -2
CFT2YLR115W RFA1P22336 621 aaKnown RBP2.58□□□□□ -2
CFT2YLR115W SUB1P54000 292 aaKnown RBP2.58□□□□□ -2
CFT2YLR115W PEX19Q07418 342 aa2.58□□□□□ -2
CFT2YLR115W MPH2P0CD99 609 aa2.58□□□□□ -2
CFT2YLR115W ERG4P25340 473 aa2.58□□□□□ -2
CFT2YLR115W HUL5P53119 910 aa2.58□□□□□ -2
CFT2YLR115W YGR125WP53273 1036 aa2.58□□□□□ -2
CFT2YLR115W KTR4P38131 464 aa2.57□□□□□ -2
CFT2YLR115W TY4A-JP47023 414 aa2.57□□□□□ -2
CFT2YLR115W TIM54P47045 478 aa2.57□□□□□ -2
CFT2YLR115W YJL049WP47048 450 aa2.57□□□□□ -2
CFT2YLR115W RTA1P53047 317 aa2.57□□□□□ -2
CFT2YLR115W YGR283CP53336 341 aaPredicted RBP2.57□□□□□ -2
CFT2YLR115W BDF2Q07442 638 aa2.57□□□□□ -2
CFT2YLR115W GPR1Q12361 961 aa2.57□□□□□ -2
CFT2YLR115W OSH2Q12451 1283 aa2.57□□□□□ -2
CFT2YLR115W HSL1P34244 1518 aa2.57□□□□□ -2
CFT2YLR115W CAN1P04817 590 aa2.57□□□□□ -2
CFT2YLR115W YCL002CP25565 263 aa2.57□□□□□ -2
CFT2YLR115W OAR1P35731 278 aa2.57□□□□□ -2
CFT2YLR115W SUL1P38359 859 aa2.57□□□□□ -2
CFT2YLR115W RSP5P39940 809 aaKnown RBP2.57□□□□□ -2
CFT2YLR115W VPS30Q02948 557 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms