RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W FKS1P38631 1876 aaKnown RBP16.44■□□□□ 0.22
RTC3YHR087W DBP5P20449 482 aaKnown RBP16.42■□□□□ 0.22
RTC3YHR087W CKI1P20485 582 aa16.42■□□□□ 0.22
RTC3YHR087W TKL1P23254 680 aaKnown RBP16.42■□□□□ 0.22
RTC3YHR087W YEL1P34225 687 aa16.42■□□□□ 0.22
RTC3YHR087W VPS29P38759 282 aa16.42■□□□□ 0.22
RTC3YHR087W YLR297WQ05899 129 aa16.42■□□□□ 0.22
RTC3YHR087W ERP3Q12403 225 aa16.42■□□□□ 0.22
RTC3YHR087W NOP14Q99207 810 aaKnown RBP16.42■□□□□ 0.22
RTC3YHR087W TOM70P07213 617 aaKnown RBP16.41■□□□□ 0.22
RTC3YHR087W SWI6P09959 803 aa16.41■□□□□ 0.22
RTC3YHR087W RGT1P32862 1170 aa16.41■□□□□ 0.22
RTC3YHR087W VPS35P34110 944 aa16.41■□□□□ 0.22
RTC3YHR087W CTR1P49573 406 aa16.41■□□□□ 0.22
RTC3YHR087W YMR084WA2P2R3 262 aa16.4■□□□□ 0.22
RTC3YHR087W NIP100P33420 868 aa16.4■□□□□ 0.22
RTC3YHR087W TVP38P36164 337 aa16.4■□□□□ 0.22
RTC3YHR087W KSP1P38691 1029 aaKnown RBP16.4■□□□□ 0.22
RTC3YHR087W LCB2P40970 561 aa16.4■□□□□ 0.22
RTC3YHR087W YGL039WP53183 348 aaKnown RBP16.4■□□□□ 0.22
RTC3YHR087W NGL3Q03210 505 aa16.4■□□□□ 0.22
RTC3YHR087W AHC1Q12433 566 aa16.4■□□□□ 0.22
RTC3YHR087W SCP160P06105 1222 aaKnown RBP RIP-Chip data16.39■□□□□ 0.21not detected
RTC3YHR087W BCS1P32839 456 aa16.39■□□□□ 0.21
RTC3YHR087W SMC1P32908 1225 aa16.39■□□□□ 0.21
RTC3YHR087W XRS2P33301 854 aa16.39■□□□□ 0.21
RTC3YHR087W LTV1P34078 463 aa16.39■□□□□ 0.21
RTC3YHR087W ATG19P35193 415 aa16.39■□□□□ 0.21
RTC3YHR087W REI1P38344 393 aaPredicted RBP16.39■□□□□ 0.21
RTC3YHR087W HXT8P40886 569 aa16.39■□□□□ 0.21
RTC3YHR087W UBP15P50101 1230 aa16.39■□□□□ 0.21
RTC3YHR087W DON1Q05610 365 aa16.39■□□□□ 0.21
RTC3YHR087W DUS4Q06063 367 aa16.39■□□□□ 0.21
RTC3YHR087W TSR1Q07381 788 aaKnown RBP16.39■□□□□ 0.21
RTC3YHR087W REG2P38232 338 aa16.38■□□□□ 0.21
RTC3YHR087W TAD1P53065 400 aa16.38■□□□□ 0.21
RTC3YHR087W ROD1Q02805 837 aa16.38■□□□□ 0.21
RTC3YHR087W CSR1Q06705 408 aaKnown RBP16.38■□□□□ 0.21
RTC3YHR087W SMC5Q08204 1093 aa16.38■□□□□ 0.21
RTC3YHR087W COT1P32798 439 aa16.37■□□□□ 0.21
RTC3YHR087W BYE1P36106 594 aa16.37■□□□□ 0.21
RTC3YHR087W MSC7P38694 644 aa16.37■□□□□ 0.21
RTC3YHR087W ENV11P53246 860 aa16.37■□□□□ 0.21
RTC3YHR087W ESBP6P53918 673 aa16.37■□□□□ 0.21
RTC3YHR087W SOV1Q04748 898 aa16.37■□□□□ 0.21
RTC3YHR087W ECM29P38737 1868 aa16.37■□□□□ 0.21
RTC3YHR087W CHS2P14180 963 aa16.36■□□□□ 0.21
RTC3YHR087W SVF1Q05515 481 aa16.36■□□□□ 0.21
RTC3YHR087W MLH2Q07980 695 aa16.36■□□□□ 0.21
RTC3YHR087W NAM7P30771 971 aaKnown RBP16.35■□□□□ 0.21
RTC3YHR087W PRP31P49704 494 aaPredicted RBP16.35■□□□□ 0.21
RTC3YHR087W TIM8P57744 87 aa16.35■□□□□ 0.21
RTC3YHR087W CDC53Q12018 815 aaKnown RBP16.35■□□□□ 0.21
RTC3YHR087W DBP7P36120 742 aaKnown RBP16.34■□□□□ 0.21
RTC3YHR087W JNM1P36224 373 aa16.34■□□□□ 0.21
RTC3YHR087W MMM1P41800 426 aa16.34■□□□□ 0.21
RTC3YHR087W MDR1P53258 950 aa16.34■□□□□ 0.21
RTC3YHR087W BTN2P53286 410 aa16.34■□□□□ 0.21
RTC3YHR087W DBP1P24784 617 aaKnown RBP16.33■□□□□ 0.2
RTC3YHR087W CDC48P25694 835 aaKnown RBP16.33■□□□□ 0.2
RTC3YHR087W TFC4P33339 1025 aa16.33■□□□□ 0.2
RTC3YHR087W YEL025CP39991 1188 aa16.33■□□□□ 0.2
RTC3YHR087W VPS53P47061 822 aa16.33■□□□□ 0.2
RTC3YHR087W YGR021WP53212 290 aa16.33■□□□□ 0.2
RTC3YHR087W TAM41P53230 385 aa16.33■□□□□ 0.2
RTC3YHR087W SLD5Q03406 294 aa16.33■□□□□ 0.2
RTC3YHR087W POB3Q04636 552 aaKnown RBP16.33■□□□□ 0.2
RTC3YHR087W OSH2Q12451 1283 aa16.33■□□□□ 0.2
RTC3YHR087W HIP1P06775 603 aa16.32■□□□□ 0.2
RTC3YHR087W YKL023WP36103 277 aaKnown RBP16.32■□□□□ 0.2
RTC3YHR087W SET5P38890 526 aaKnown RBP16.32■□□□□ 0.2
RTC3YHR087W SMF1P38925 575 aa16.32■□□□□ 0.2
RTC3YHR087W RME1P32338 300 aaKnown RBP16.31■□□□□ 0.2
RTC3YHR087W CNS1P33313 385 aa16.31■□□□□ 0.2
RTC3YHR087W CCT4P39078 528 aaKnown RBP16.31■□□□□ 0.2
RTC3YHR087W YMR124WP39523 943 aaKnown RBP16.31■□□□□ 0.2
RTC3YHR087W SYH1Q02875 849 aaKnown RBP16.31■□□□□ 0.2
RTC3YHR087W COQ9Q05779 260 aa16.31■□□□□ 0.2
RTC3YHR087W NOC3Q07896 663 aaPredicted RBP16.31■□□□□ 0.2
RTC3YHR087W TRP2P00899 507 aaKnown RBP16.3■□□□□ 0.2
RTC3YHR087W RPO26P20435 155 aa16.3■□□□□ 0.2
RTC3YHR087W KIP1P28742 1111 aa16.3■□□□□ 0.2
RTC3YHR087W YLR001CQ07895 862 aa16.3■□□□□ 0.2
RTC3YHR087W SIL1Q08199 421 aa16.3■□□□□ 0.2
RTC3YHR087W YDR034W-BQ6Q5X2 51 aa16.3■□□□□ 0.2
RTC3YHR087W SNF1P06782 633 aaKnown RBP16.29■□□□□ 0.2
RTC3YHR087W MUD1P32605 298 aaKnown RBP16.29■□□□□ 0.2
RTC3YHR087W RAD54P32863 898 aa16.29■□□□□ 0.2
RTC3YHR087W ERC1P38767 581 aa16.29■□□□□ 0.2
RTC3YHR087W SGM1P47166 707 aa16.29■□□□□ 0.2
RTC3YHR087W SHE10P53075 577 aa16.29■□□□□ 0.2
RTC3YHR087W RTT102P53330 157 aa16.29■□□□□ 0.2
RTC3YHR087W UBP3Q01477 912 aaKnown RBP RIP-Chip data16.29■□□□□ 0.2not detected
RTC3YHR087W RRB1Q04225 511 aaKnown RBP16.29■□□□□ 0.2
RTC3YHR087W DED1P06634 604 aaKnown RBP16.28■□□□□ 0.2
RTC3YHR087W VTC3Q02725 835 aa16.28■□□□□ 0.2
RTC3YHR087W YMR321CQ04898 105 aa16.28■□□□□ 0.2
RTC3YHR087W ATG23Q06671 453 aa16.28■□□□□ 0.2
RTC3YHR087W IES4Q08561 116 aa16.28■□□□□ 0.2
RTC3YHR087W NCR1Q12200 1170 aa16.28■□□□□ 0.2
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms