RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	TYE7	P33122	291 aa	Predicted RBP	3.01	□□□□□ -1.93
CSN9	YDR179C	CTF13	P35203	478 aa		3.01	□□□□□ -1.93
CSN9	YDR179C	YRO2	P38079	344 aa		3.01	□□□□□ -1.93
CSN9	YDR179C	CTF8	P38877	133 aa		3.01	□□□□□ -1.93
CSN9	YDR179C	ATF1	P40353	525 aa		3.01	□□□□□ -1.93
CSN9	YDR179C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
CSN9	YDR179C	STB4	P50104	949 aa		3.01	□□□□□ -1.93
CSN9	YDR179C	DLT1	Q04216	342 aa		3.01	□□□□□ -1.93
CSN9	YDR179C	LCD1	Q04377	747 aa		3.01	□□□□□ -1.93
CSN9	YDR179C	NGG1	P32494	702 aa		3	□□□□□ -1.93
CSN9	YDR179C	YHL017W	P38745	532 aa		3	□□□□□ -1.93
CSN9	YDR179C	YIL108W	P40483	696 aa	Known RBP	3	□□□□□ -1.93
CSN9	YDR179C	ERG5	P54781	538 aa		3	□□□□□ -1.93
CSN9	YDR179C	SEC21	P32074	935 aa	Known RBP	2.99	□□□□□ -1.93
CSN9	YDR179C	REC104	P33323	182 aa		2.99	□□□□□ -1.93
CSN9	YDR179C	CUE2	P36075	443 aa	Known RBP	2.99	□□□□□ -1.93
CSN9	YDR179C	ELO3	P40319	345 aa		2.99	□□□□□ -1.93
CSN9	YDR179C	YKR011C	Q02209	353 aa		2.99	□□□□□ -1.93
CSN9	YDR179C	SSL1	Q04673	461 aa	Predicted RBP	2.99	□□□□□ -1.93
CSN9	YDR179C	JIP5	Q06214	492 aa	Predicted RBP	2.99	□□□□□ -1.93
CSN9	YDR179C	FRE5	Q08908	694 aa		2.99	□□□□□ -1.93
CSN9	YDR179C	RPS9A	O13516	197 aa	Known RBP	2.98	□□□□□ -1.93
CSN9	YDR179C	CAF20	P12962	161 aa	Known RBP	2.98	□□□□□ -1.93
CSN9	YDR179C	NPP1	P25353	742 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	AFR1	P33304	620 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	MTH1	P35198	433 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	YHR078W	P38799	552 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	CEP3	P40969	608 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	AMA1	P50082	593 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	PUS2	P53167	370 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	SLU7	Q02775	382 aa	Known RBP	2.98	□□□□□ -1.93
CSN9	YDR179C	YMR206W	Q03695	313 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	BDF2	Q07442	638 aa		2.98	□□□□□ -1.93
CSN9	YDR179C	TUB3	P09734	445 aa	Known RBP	2.97	□□□□□ -1.93
CSN9	YDR179C	MPH2	P0CD99	609 aa		2.97	□□□□□ -1.93
CSN9	YDR179C	PRI2	P20457	528 aa		2.97	□□□□□ -1.93
CSN9	YDR179C	URA1	P28272	314 aa	Predicted RBP	2.97	□□□□□ -1.93
CSN9	YDR179C	YKL069W	P36088	180 aa		2.97	□□□□□ -1.93
CSN9	YDR179C	SPC42	P36094	363 aa		2.97	□□□□□ -1.93
CSN9	YDR179C	SDS3	P40505	327 aa		2.97	□□□□□ -1.93
CSN9	YDR179C	NIT3	P49954	291 aa		2.97	□□□□□ -1.93
CSN9	YDR179C	ADY4	Q05955	493 aa		2.97	□□□□□ -1.93
CSN9	YDR179C	TDA5	Q06417	326 aa	Known RBP	2.97	□□□□□ -1.93
CSN9	YDR179C	GFA1	P14742	717 aa	Known RBP	2.96	□□□□□ -1.94
CSN9	YDR179C	RPP1	P38786	293 aa		2.96	□□□□□ -1.94
CSN9	YDR179C	SPF1	P39986	1215 aa	Known RBP	2.96	□□□□□ -1.94
CSN9	YDR179C	TOK1	P40310	691 aa		2.96	□□□□□ -1.94
CSN9	YDR179C	SNU71	P53207	620 aa	Known RBP	2.96	□□□□□ -1.94
CSN9	YDR179C	GND2	P53319	492 aa		2.96	□□□□□ -1.94
CSN9	YDR179C	RIA1	P53893	1110 aa		2.96	□□□□□ -1.94
CSN9	YDR179C	MUK1	Q02866	612 aa		2.96	□□□□□ -1.94
CSN9	YDR179C	PKH1	Q03407	766 aa		2.96	□□□□□ -1.94
CSN9	YDR179C	BUL2	Q03758	920 aa	Known RBP	2.96	□□□□□ -1.94
CSN9	YDR179C	SPO75	Q07798	868 aa		2.96	□□□□□ -1.94
CSN9	YDR179C	NDJ1	Q12366	352 aa		2.96	□□□□□ -1.94
CSN9	YDR179C	CDC43	P18898	376 aa		2.95	□□□□□ -1.94
CSN9	YDR179C	ILV6	P25605	309 aa	Known RBP	2.95	□□□□□ -1.94
CSN9	YDR179C	RPD3	P32561	433 aa		2.95	□□□□□ -1.94
CSN9	YDR179C	VAC8	P39968	578 aa		2.95	□□□□□ -1.94
CSN9	YDR179C	ERP6	P53198	216 aa		2.95	□□□□□ -1.94
CSN9	YDR179C	UTP8	P53276	713 aa	Known RBP	2.95	□□□□□ -1.94
CSN9	YDR179C	NOG2	P53742	486 aa	Known RBP	2.95	□□□□□ -1.94
CSN9	YDR179C	ASI2	P53895	289 aa		2.95	□□□□□ -1.94
CSN9	YDR179C	HDA1	P53973	706 aa		2.95	□□□□□ -1.94
CSN9	YDR179C	HCA4	P20448	770 aa	Known RBP	2.94	□□□□□ -1.94
CSN9	YDR179C	HBS1	P32769	611 aa	Known RBP	2.94	□□□□□ -1.94
CSN9	YDR179C	PPS1	P38148	807 aa		2.94	□□□□□ -1.94
CSN9	YDR179C	PZF1	P39933	429 aa		2.94	□□□□□ -1.94
CSN9	YDR179C	FKH2	P41813	862 aa		2.94	□□□□□ -1.94
CSN9	YDR179C	CRR1	Q05790	422 aa		2.94	□□□□□ -1.94
CSN9	YDR179C	STE5	P32917	917 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	PET10	P36139	283 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	YBR184W	P38299	523 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	VHR1	P40522	640 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	YIR042C	P40586	236 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	ALR2	P43553	858 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	HSV2	P50079	448 aa	Predicted RBP	2.93	□□□□□ -1.94
CSN9	YDR179C	MUP1	P50276	574 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	ALD6	P54115	500 aa	Known RBP	2.93	□□□□□ -1.94
CSN9	YDR179C	FMP25	Q08023	583 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	MRH1	Q12117	320 aa	Predicted RBP	2.93	□□□□□ -1.94
CSN9	YDR179C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	not detected
CSN9	YDR179C	TRM13	Q12383	476 aa		2.93	□□□□□ -1.94
CSN9	YDR179C	CYS3	P31373	394 aa	Known RBP	2.92	□□□□□ -1.94
CSN9	YDR179C	PFD1	P46988	109 aa		2.92	□□□□□ -1.94
CSN9	YDR179C	YJL163C	P46996	555 aa		2.92	□□□□□ -1.94
CSN9	YDR179C	DAM1	P53267	343 aa		2.92	□□□□□ -1.94
CSN9	YDR179C	DUS1	P53759	423 aa	Known RBP	2.92	□□□□□ -1.94
CSN9	YDR179C	LGE1	Q02796	332 aa	Known RBP	2.92	□□□□□ -1.94
CSN9	YDR179C	NAN1	Q02931	896 aa	Known RBP	2.92	□□□□□ -1.94
CSN9	YDR179C	EAF1	Q06337	982 aa		2.92	□□□□□ -1.94
CSN9	YDR179C	WRS1	Q12109	432 aa	Known RBP	2.92	□□□□□ -1.94
CSN9	YDR179C	YPR071W	Q12346	211 aa		2.92	□□□□□ -1.94
CSN9	YDR179C	OSH2	Q12451	1283 aa		2.92	□□□□□ -1.94
CSN9	YDR179C	ATG11	Q12527	1178 aa		2.92	□□□□□ -1.94
CSN9	YDR179C	LAT1	P12695	482 aa	Known RBP	2.91	□□□□□ -1.94
CSN9	YDR179C	DMC1	P25453	334 aa		2.91	□□□□□ -1.94
CSN9	YDR179C	YIL166C	P40445	542 aa		2.91	□□□□□ -1.94
CSN9	YDR179C	NRG1	Q03125	231 aa		2.91	□□□□□ -1.94
CSN9	YDR179C	RSC3	Q06639	885 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms