RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	STO1	P34160	861 aa	Known RBP	4.66	□□□□□ -1.66
HCM1	YCR065W	APL2	P36000	726 aa	Predicted RBP	4.66	□□□□□ -1.66
HCM1	YCR065W	VBA5	P36172	582 aa		4.66	□□□□□ -1.66
HCM1	YCR065W	BAP2	P38084	609 aa		4.66	□□□□□ -1.66
HCM1	YCR065W	RRP8	P38961	392 aa	Known RBP	4.66	□□□□□ -1.66
HCM1	YCR065W	MBP1	P39678	833 aa		4.66	□□□□□ -1.66
HCM1	YCR065W	GTS1	P40956	396 aa		4.66	□□□□□ -1.66
HCM1	YCR065W	INP52	P50942	1183 aa		4.66	□□□□□ -1.66
HCM1	YCR065W	TDA5	Q06417	326 aa	Known RBP	4.66	□□□□□ -1.66
HCM1	YCR065W	YPL191C	Q08930	360 aa		4.66	□□□□□ -1.66
HCM1	YCR065W	TOM70	P07213	617 aa	Known RBP	4.65	□□□□□ -1.66
HCM1	YCR065W	RPL11A	P0C0W9	174 aa	Known RBP	4.65	□□□□□ -1.66
HCM1	YCR065W	ACE2	P21192	770 aa		4.65	□□□□□ -1.66
HCM1	YCR065W	APN1	P22936	367 aa		4.65	□□□□□ -1.66
HCM1	YCR065W	URA1	P28272	314 aa	Predicted RBP	4.65	□□□□□ -1.66
HCM1	YCR065W	PEX6	P33760	1030 aa		4.65	□□□□□ -1.66
HCM1	YCR065W	OMA1	P36163	345 aa		4.65	□□□□□ -1.66
HCM1	YCR065W	RPN3	P40016	523 aa	Known RBP	4.65	□□□□□ -1.66
HCM1	YCR065W	VID30	P53076	958 aa		4.65	□□□□□ -1.66
HCM1	YCR065W	GGA1	Q06336	557 aa		4.65	□□□□□ -1.66
HCM1	YCR065W	RPL11B	Q3E757	174 aa	Predicted RBP	4.65	□□□□□ -1.66
HCM1	YCR065W	GRX1	P25373	110 aa	Known RBP	4.64	□□□□□ -1.67
HCM1	YCR065W	SBA1	P28707	216 aa	Known RBP	4.64	□□□□□ -1.67
HCM1	YCR065W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
HCM1	YCR065W	SAP190	P36123	1033 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	MAM1	P40065	302 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	RSC1	P53236	928 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	BRE4	Q07660	1125 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	ISA1	Q07821	250 aa	Predicted RBP	4.64	□□□□□ -1.67
HCM1	YCR065W	ATP4	P05626	244 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	PET123	P17558	318 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	IME2	P32581	645 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
HCM1	YCR065W	ECM32	P32644	1121 aa	Known RBP	4.64	□□□□□ -1.67
HCM1	YCR065W	LIP5	P32875	414 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	MDL2	P33311	773 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	RPC37	P36121	282 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	PNT1	P38969	423 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	TNA1	P53322	534 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	RNH1	Q04740	348 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	SPP382	Q06411	708 aa	Predicted RBP	4.64	□□□□□ -1.67
HCM1	YCR065W	BDF2	Q07442	638 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	CLP1	Q08685	445 aa	Predicted RBP	4.64	□□□□□ -1.67
HCM1	YCR065W	PCL8	Q08966	492 aa		4.64	□□□□□ -1.67
HCM1	YCR065W	CDC53	Q12018	815 aa	Known RBP	4.64	□□□□□ -1.67
HCM1	YCR065W	LPX1	Q12405	387 aa	Known RBP	4.64	□□□□□ -1.67
HCM1	YCR065W	COQ4	O13525	335 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	ADP1	P25371	1049 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	SRO9	P25567	434 aa	Known RBP	4.63	□□□□□ -1.67
HCM1	YCR065W	YKL100C	P34248	587 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	RRF1	P38771	230 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	CRP1	P38845	465 aa	Known RBP	4.63	□□□□□ -1.67
HCM1	YCR065W	YMR124W	P39523	943 aa	Known RBP	4.63	□□□□□ -1.67
HCM1	YCR065W	DAS1	P47005	663 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	ATP22	P50273	684 aa	Predicted RBP	4.63	□□□□□ -1.67
HCM1	YCR065W	BTN2	P53286	410 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	YNL247W	P53852	767 aa	Known RBP	4.63	□□□□□ -1.67
HCM1	YCR065W	YLH47	Q06493	454 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	ARV1	Q06541	321 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	RSC58	Q07979	502 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	NSI1	Q12457	570 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	YOR131C	Q12486	218 aa		4.63	□□□□□ -1.67
HCM1	YCR065W	PIF1	P07271	859 aa		4.62	□□□□□ -1.67
HCM1	YCR065W	RED1	P14291	827 aa		4.62	□□□□□ -1.67
HCM1	YCR065W	DEP1	P31385	405 aa		4.62	□□□□□ -1.67
HCM1	YCR065W	AIM26	P32858	118 aa		4.62	□□□□□ -1.67
HCM1	YCR065W	HSP78	P33416	811 aa		4.62	□□□□□ -1.67
HCM1	YCR065W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
HCM1	YCR065W	MEF2	P39677	819 aa		4.62	□□□□□ -1.67
HCM1	YCR065W	NDE1	P40215	560 aa		4.62	□□□□□ -1.67
HCM1	YCR065W	RSC8	P43609	557 aa	Known RBP	4.62	□□□□□ -1.67
HCM1	YCR065W	SHE9	Q04172	456 aa		4.62	□□□□□ -1.67
HCM1	YCR065W	SLA2	P33338	968 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
HCM1	YCR065W	MAC1	P35192	417 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	YKL222C	P35995	705 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	UGA2	P38067	497 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	CCZ1	P38273	704 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	YBR184W	P38299	523 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	VPS41	P38959	992 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	RTT105	P40063	208 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	IRR1	P40541	1150 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	PFD1	P46988	109 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	RAD17	P48581	401 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	TMA7	Q3E764	64 aa	Known RBP	4.61	□□□□□ -1.67
HCM1	YCR065W	ATG19	P35193	415 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	YKL050C	P35736	922 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	ETP1	P38748	585 aa	Known RBP	4.61	□□□□□ -1.67
HCM1	YCR065W	PIK1	P39104	1066 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
HCM1	YCR065W	GYP7	P48365	746 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	ERO1	Q03103	563 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	SPC19	Q03954	165 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	RRB1	Q04225	511 aa	Known RBP	4.61	□□□□□ -1.67
HCM1	YCR065W	TAP42	Q04372	366 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	SMD2	Q06217	110 aa	Known RBP	4.61	□□□□□ -1.67
HCM1	YCR065W	TSR2	Q06672	205 aa	Known RBP	4.61	□□□□□ -1.67
HCM1	YCR065W	MDM38	Q08179	573 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	ACM1	Q08981	209 aa		4.61	□□□□□ -1.67
HCM1	YCR065W	NYV1	Q12255	253 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms