RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeastyeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCM1YCR065W MTC1P47018 478 aaKnown RBP11.33□□□□□ -0.6
HCM1YCR065W DRS1P32892 752 aaKnown RBP11.24□□□□□ -0.61
HCM1YCR065W FAP1P53971 965 aa11.21□□□□□ -0.61
HCM1YCR065W PRY3P47033 881 aa10.61□□□□□ -0.71
HCM1YCR065W YCK3P39962 524 aa10.09□□□□□ -0.79
HCM1YCR065W AAD16Q02895 342 aa10.04□□□□□ -0.8
HCM1YCR065W PRI1P10363 409 aa10□□□□□ -0.81
HCM1YCR065W HAA1Q12753 694 aaKnown RBP9.83□□□□□ -0.84
HCM1YCR065W BFR2Q06631 534 aaKnown RBP9.65□□□□□ -0.86
HCM1YCR065W DIP2Q12220 943 aaPredicted RBP9.6□□□□□ -0.87
HCM1YCR065W AVT3P36062 692 aa9.46□□□□□ -0.89
HCM1YCR065W ISW2Q08773 1120 aa9.42□□□□□ -0.9
HCM1YCR065W TSR3Q12094 313 aaKnown RBP9.42□□□□□ -0.9
HCM1YCR065W RPG1P38249 964 aaKnown RBP9.41□□□□□ -0.9
HCM1YCR065W RSE1Q04693 1361 aaKnown RBP9.07□□□□□ -0.96
HCM1YCR065W MRPL32P25348 183 aa8.98□□□□□ -0.97
HCM1YCR065W TFA1P36100 482 aa8.97□□□□□ -0.97
HCM1YCR065W YGL015CP33199 130 aa8.89□□□□□ -0.99
HCM1YCR065W RPL17AP05740 184 aaKnown RBP8.78□□□□□ -1
HCM1YCR065W RPL17BP46990 184 aaKnown RBP8.78□□□□□ -1
HCM1YCR065W BUD31P25337 157 aaPredicted RBP8.66□□□□□ -1.02
HCM1YCR065W REB1P21538 810 aa8.65□□□□□ -1.02
HCM1YCR065W SPT21P35209 758 aa8.47□□□□□ -1.05
HCM1YCR065W CDC27P38042 758 aa8.44□□□□□ -1.06
HCM1YCR065W RIM101P33400 625 aa8.29□□□□□ -1.08
HCM1YCR065W MAP2P38174 421 aaKnown RBP8.27□□□□□ -1.08
HCM1YCR065W UBP10P53874 792 aaPredicted RBP8.24□□□□□ -1.09
HCM1YCR065W YKR023WP36119 530 aaKnown RBP8.23□□□□□ -1.09
HCM1YCR065W SIS1P25294 352 aaKnown RBP8.11□□□□□ -1.11
HCM1YCR065W HOP09932 586 aa8.07□□□□□ -1.12
HCM1YCR065W OXP1P28273 1286 aa8.07□□□□□ -1.12
HCM1YCR065W DCD1P06773 312 aa8.05□□□□□ -1.12
HCM1YCR065W TFC8Q12308 588 aa8.05□□□□□ -1.12
HCM1YCR065W PTP3P40048 928 aa7.95□□□□□ -1.14
HCM1YCR065W UBP9P39967 754 aa7.92□□□□□ -1.14
HCM1YCR065W YAH1Q12184 172 aaKnown RBP7.92□□□□□ -1.14
HCM1YCR065W SCY1P53009 804 aa7.91□□□□□ -1.14
HCM1YCR065W TGL3P40308 642 aa7.89□□□□□ -1.15
HCM1YCR065W TIF4632P39936 914 aaKnown RBP7.88□□□□□ -1.15
HCM1YCR065W YIL055CP40523 627 aaKnown RBP7.88□□□□□ -1.15
HCM1YCR065W SSP1P38871 571 aa7.86□□□□□ -1.15
HCM1YCR065W SLX5P32828 619 aaKnown RBP7.83□□□□□ -1.16
HCM1YCR065W BCH2P36122 765 aa7.82□□□□□ -1.16
HCM1YCR065W YLR271WQ06152 274 aa7.82□□□□□ -1.16
HCM1YCR065W RSM7P47150 247 aa7.78□□□□□ -1.16
HCM1YCR065W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
HCM1YCR065W AI2P03876 854 aa7.67□□□□□ -1.18
HCM1YCR065W EPS1P40557 701 aa7.66□□□□□ -1.18
HCM1YCR065W BDF1P35817 686 aa7.62□□□□□ -1.19
HCM1YCR065W PSD2P53037 1138 aaKnown RBP7.61□□□□□ -1.19
HCM1YCR065W CST9Q06032 482 aa7.6□□□□□ -1.19
HCM1YCR065W BBC1P47068 1157 aa7.59□□□□□ -1.19
HCM1YCR065W MGA2P40578 1113 aa7.58□□□□□ -1.2
HCM1YCR065W YBL029C-AQ3E756 94 aa7.54□□□□□ -1.2
HCM1YCR065W MST1P07236 462 aa7.46□□□□□ -1.22
HCM1YCR065W MRM1P25270 412 aa7.44□□□□□ -1.22
HCM1YCR065W VNX1P42839 908 aa7.38□□□□□ -1.23
HCM1YCR065W RCR1P38212 213 aa7.37□□□□□ -1.23
HCM1YCR065W DMA1P38823 416 aa7.37□□□□□ -1.23
HCM1YCR065W YOR238WQ08634 303 aa7.35□□□□□ -1.23
HCM1YCR065W RQC2Q12532 1038 aaKnown RBP7.32□□□□□ -1.24
HCM1YCR065W AIR2Q12476 344 aaKnown RBP7.3□□□□□ -1.24
HCM1YCR065W RTG3P38165 486 aa7.29□□□□□ -1.24
HCM1YCR065W SPP1Q03012 353 aa7.29□□□□□ -1.24
HCM1YCR065W RAM2P29703 316 aa7.28□□□□□ -1.24
HCM1YCR065W VPS29P38759 282 aa7.26□□□□□ -1.25
HCM1YCR065W WSC3Q12215 556 aa7.25□□□□□ -1.25
HCM1YCR065W FKH1P40466 484 aa7.24□□□□□ -1.25
HCM1YCR065W NSR1P27476 414 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
HCM1YCR065W YJL171CP46992 396 aa7.2□□□□□ -1.26
HCM1YCR065W STS1P38637 319 aa7.19□□□□□ -1.26
HCM1YCR065W YAP5P40574 245 aa7.17□□□□□ -1.26
HCM1YCR065W YFR006WP43590 535 aa7.17□□□□□ -1.26
HCM1YCR065W YMR1P47147 688 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
HCM1YCR065W PIB1Q06651 286 aa7.17□□□□□ -1.26
HCM1YCR065W DBP1P24784 617 aaKnown RBP7.16□□□□□ -1.26
HCM1YCR065W TIF11P38912 153 aaKnown RBP7.15□□□□□ -1.27
HCM1YCR065W MAK11P20484 414 aaKnown RBP7.14□□□□□ -1.27
HCM1YCR065W LDB19Q12502 818 aa7.07□□□□□ -1.28
HCM1YCR065W SET1P38827 1080 aaKnown RBP7.06□□□□□ -1.28
HCM1YCR065W COQ8P27697 501 aa7.05□□□□□ -1.28
HCM1YCR065W EDS1P38073 919 aa7.05□□□□□ -1.28
HCM1YCR065W BMT6Q12291 365 aa7.04□□□□□ -1.28
HCM1YCR065W MIF2P35201 549 aa7.03□□□□□ -1.28
HCM1YCR065W VMA1P17255 1071 aaKnown RBP7.03□□□□□ -1.28
HCM1YCR065W IOC2Q12072 812 aa7.03□□□□□ -1.28
HCM1YCR065W GTT3P39996 337 aa7.02□□□□□ -1.29
HCM1YCR065W ULI1P43604 169 aa7□□□□□ -1.29
HCM1YCR065W SAS10Q12136 610 aaPredicted RBP6.99□□□□□ -1.29
HCM1YCR065W TAF7Q05021 590 aa6.97□□□□□ -1.29
HCM1YCR065W PTC3P34221 468 aaKnown RBP6.96□□□□□ -1.3
HCM1YCR065W SAM3Q08986 587 aa6.93□□□□□ -1.3
HCM1YCR065W YPR148CQ06523 435 aa6.92□□□□□ -1.3
HCM1YCR065W YOL036WQ08206 761 aa6.91□□□□□ -1.3
HCM1YCR065W SET4P42948 560 aa6.9□□□□□ -1.31
HCM1YCR065W VPS70P47161 811 aa6.89□□□□□ -1.31
HCM1YCR065W NOP53Q12080 455 aaKnown RBP6.89□□□□□ -1.31
HCM1YCR065W IFH1P39520 1085 aa6.87□□□□□ -1.31
HCM1YCR065W GRE2Q12068 342 aaKnown RBP6.87□□□□□ -1.31
HCM1YCR065W GYP5Q12344 894 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms