RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W MET7Q08645 548 aa10.99□□□□□ -0.65
SHH4YLR164W APL4Q12028 832 aa10.99□□□□□ -0.65
SHH4YLR164W MAS2P11914 482 aa10.98□□□□□ -0.65
SHH4YLR164W DBP5P20449 482 aaKnown RBP10.98□□□□□ -0.65
SHH4YLR164W DBP1P24784 617 aaKnown RBP10.98□□□□□ -0.65
SHH4YLR164W HFM1P51979 1187 aa10.98□□□□□ -0.65
SHH4YLR164W TAM41P53230 385 aa10.98□□□□□ -0.65
SHH4YLR164W CAF130P53280 1122 aaPredicted RBP10.98□□□□□ -0.65
SHH4YLR164W VPS75P53853 264 aa10.98□□□□□ -0.65
SHH4YLR164W YPR148CQ06523 435 aa10.98□□□□□ -0.65
SHH4YLR164W NOC3Q07896 663 aaPredicted RBP10.98□□□□□ -0.65
SHH4YLR164W YLL058WQ12198 575 aa10.98□□□□□ -0.65
SHH4YLR164W ECM29P38737 1868 aa10.98□□□□□ -0.65
SHH4YLR164W PCK1P10963 549 aa10.97□□□□□ -0.65
SHH4YLR164W SPO11P23179 398 aa10.97□□□□□ -0.65
SHH4YLR164W IRE1P32361 1115 aa10.97□□□□□ -0.65
SHH4YLR164W YSC83P32792 385 aa10.97□□□□□ -0.65
SHH4YLR164W AFG3P39925 761 aa10.97□□□□□ -0.65
SHH4YLR164W LCB2P40970 561 aa10.97□□□□□ -0.65
SHH4YLR164W SPO75Q07798 868 aa10.97□□□□□ -0.65
SHH4YLR164W FAL1Q12099 399 aaKnown RBP10.97□□□□□ -0.65
SHH4YLR164W NAM7P30771 971 aaKnown RBP10.96□□□□□ -0.65
SHH4YLR164W MNR2P35724 969 aa10.96□□□□□ -0.65
SHH4YLR164W MNN4P36044 1178 aa10.96□□□□□ -0.65
SHH4YLR164W LEO1P38439 464 aa10.96□□□□□ -0.65
SHH4YLR164W NCS6P53088 359 aa10.96□□□□□ -0.65
SHH4YLR164W MED1Q12321 566 aa10.96□□□□□ -0.65
SHH4YLR164W MAK16P10962 306 aaPredicted RBP10.95□□□□□ -0.66
SHH4YLR164W CYC8P14922 966 aa10.95□□□□□ -0.66
SHH4YLR164W ATG19P35193 415 aa10.95□□□□□ -0.66
SHH4YLR164W SKP2P42843 763 aa10.95□□□□□ -0.66
SHH4YLR164W CCM1P48237 864 aaPredicted RBP10.95□□□□□ -0.66
SHH4YLR164W COG4Q06096 861 aa10.95□□□□□ -0.66
SHH4YLR164W CUR1Q06469 252 aa10.95□□□□□ -0.66
SHH4YLR164W ICL2Q12031 575 aa10.95□□□□□ -0.66
SHH4YLR164W PHO8P11491 566 aa10.94□□□□□ -0.66
SHH4YLR164W MRF1P30775 413 aaPredicted RBP10.94□□□□□ -0.66
SHH4YLR164W EFT1P32324 842 aaKnown RBP10.94□□□□□ -0.66
SHH4YLR164W COT1P32798 439 aa10.94□□□□□ -0.66
SHH4YLR164W SAP190P36123 1033 aa10.94□□□□□ -0.66
SHH4YLR164W UBP13P38187 747 aa10.94□□□□□ -0.66
SHH4YLR164W EAF5P39995 279 aa10.94□□□□□ -0.66
SHH4YLR164W PSF2P40359 213 aa10.94□□□□□ -0.66
SHH4YLR164W RRD1P40454 393 aaKnown RBP10.94□□□□□ -0.66
SHH4YLR164W PSP2P50109 593 aaKnown RBP10.94□□□□□ -0.66
SHH4YLR164W RTT102P53330 157 aa10.94□□□□□ -0.66
SHH4YLR164W SMC5Q08204 1093 aa10.94□□□□□ -0.66
SHH4YLR164W IES4Q08561 116 aa10.94□□□□□ -0.66
SHH4YLR164W SUT2Q12286 268 aa10.94□□□□□ -0.66
SHH4YLR164W TUP1P16649 713 aa10.93□□□□□ -0.66
SHH4YLR164W RPC53P25441 422 aa10.93□□□□□ -0.66
SHH4YLR164W PCH2P38126 564 aa10.93□□□□□ -0.66
SHH4YLR164W ENV11P53246 860 aa10.93□□□□□ -0.66
SHH4YLR164W CDC53Q12018 815 aaKnown RBP10.93□□□□□ -0.66
SHH4YLR164W MFT1P33441 392 aaKnown RBP10.92□□□□□ -0.66
SHH4YLR164W VFA1P40080 203 aa10.92□□□□□ -0.66
SHH4YLR164W ACF4P47129 309 aa10.92□□□□□ -0.66
SHH4YLR164W TAD1P53065 400 aa10.92□□□□□ -0.66
SHH4YLR164W VID30P53076 958 aa10.92□□□□□ -0.66
SHH4YLR164W YNL146WP53906 100 aa10.92□□□□□ -0.66
SHH4YLR164W UME1Q03010 460 aa10.92□□□□□ -0.66
SHH4YLR164W ATG9Q12142 997 aa10.92□□□□□ -0.66
SHH4YLR164W ATG11Q12527 1178 aa10.92□□□□□ -0.66
SHH4YLR164W SSB1P11484 613 aaKnown RBP10.91□□□□□ -0.66
SHH4YLR164W RME1P32338 300 aaKnown RBP10.91□□□□□ -0.66
SHH4YLR164W SMY2P32909 740 aaKnown RBP10.91□□□□□ -0.66
SHH4YLR164W YKL023WP36103 277 aaKnown RBP10.91□□□□□ -0.66
SHH4YLR164W SSB2P40150 613 aaKnown RBP10.91□□□□□ -0.66
SHH4YLR164W FYV8P46949 817 aaKnown RBP10.91□□□□□ -0.66
SHH4YLR164W MDR1P53258 950 aa10.91□□□□□ -0.66
SHH4YLR164W TPO2P53283 614 aa10.91□□□□□ -0.66
SHH4YLR164W DAK1P54838 584 aaKnown RBP10.91□□□□□ -0.66
SHH4YLR164W ULP1Q02724 621 aa10.91□□□□□ -0.66
SHH4YLR164W SPO12P17123 173 aa10.9□□□□□ -0.66
SHH4YLR164W UBC1P21734 215 aaKnown RBP10.9□□□□□ -0.66
SHH4YLR164W SSD1P24276 1250 aaKnown RBP RIP-Chip data10.9□□□□□ -0.66not detected
SHH4YLR164W RRP43P25359 394 aaPredicted RBP10.9□□□□□ -0.66
SHH4YLR164W APL1P27351 700 aa10.9□□□□□ -0.66
SHH4YLR164W TIM23P32897 222 aa10.9□□□□□ -0.66
SHH4YLR164W YJR107WP47145 328 aa10.9□□□□□ -0.66
SHH4YLR164W ORC5P50874 479 aa10.9□□□□□ -0.66
SHH4YLR164W TIM8P57744 87 aa10.9□□□□□ -0.66
SHH4YLR164W VTC3Q02725 835 aa10.9□□□□□ -0.66
SHH4YLR164W YDR090CQ03193 310 aa10.9□□□□□ -0.66
SHH4YLR164W MLH2Q07980 695 aa10.9□□□□□ -0.66
SHH4YLR164W HMI1Q12039 706 aa10.9□□□□□ -0.66
SHH4YLR164W RRP6Q12149 733 aaKnown RBP10.9□□□□□ -0.66
SHH4YLR164W YOR131CQ12486 218 aa10.9□□□□□ -0.66
SHH4YLR164W PPR1P07272 904 aaPredicted RBP10.89□□□□□ -0.67
SHH4YLR164W CHS2P14180 963 aa10.89□□□□□ -0.67
SHH4YLR164W AVT3P36062 692 aa10.89□□□□□ -0.67
SHH4YLR164W EFM2P38347 419 aa10.89□□□□□ -0.67
SHH4YLR164W OSW7P43611 510 aa10.89□□□□□ -0.67
SHH4YLR164W CTR9P89105 1077 aa10.89□□□□□ -0.67
SHH4YLR164W MSC2Q03455 724 aa10.89□□□□□ -0.67
SHH4YLR164W SLX4Q12098 748 aa10.89□□□□□ -0.67
SHH4YLR164W CDC11P32458 415 aa10.88□□□□□ -0.67
SHH4YLR164W MUD1P32605 298 aaKnown RBP10.88□□□□□ -0.67
SHH4YLR164W XRS2P33301 854 aa10.88□□□□□ -0.67
SHH4YLR164W ATG3P40344 310 aa10.88□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms