RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	YLR224W	Q05947	369 aa		3.42	□□□□□ -1.86
URM1	YIL008W	CDA1	Q06702	301 aa		3.42	□□□□□ -1.86
URM1	YIL008W	ADE8	P04161	214 aa		3.41	□□□□□ -1.86
URM1	YIL008W	RPP2A	P05319	106 aa	Known RBP	3.41	□□□□□ -1.86
URM1	YIL008W	HIS5	P07172	385 aa		3.41	□□□□□ -1.86
URM1	YIL008W	GRX1	P25373	110 aa	Known RBP	3.41	□□□□□ -1.86
URM1	YIL008W	PPH3	P32345	308 aa		3.41	□□□□□ -1.86
URM1	YIL008W	AAR2	P32357	355 aa	Predicted RBP	3.41	□□□□□ -1.86
URM1	YIL008W	SRP101	P32916	621 aa		3.41	□□□□□ -1.86
URM1	YIL008W	YBR184W	P38299	523 aa		3.41	□□□□□ -1.86
URM1	YIL008W	PSP2	P50109	593 aa	Known RBP	3.41	□□□□□ -1.86
URM1	YIL008W	MCM6	P53091	1017 aa	Known RBP	3.41	□□□□□ -1.86
URM1	YIL008W	SFB2	P53953	876 aa		3.41	□□□□□ -1.86
URM1	YIL008W	TMA10	Q06177	86 aa		3.41	□□□□□ -1.86
URM1	YIL008W	SSF2	Q12153	453 aa	Predicted RBP	3.41	□□□□□ -1.86
URM1	YIL008W	YKR078W	P36158	585 aa	Known RBP	3.4	□□□□□ -1.87
URM1	YIL008W	TSL1	P38427	1098 aa	Known RBP	3.4	□□□□□ -1.87
URM1	YIL008W	CCC2	P38995	1004 aa		3.4	□□□□□ -1.87
URM1	YIL008W	PLB1	P39105	664 aa		3.4	□□□□□ -1.87
URM1	YIL008W	SIT1	P39980	628 aa		3.4	□□□□□ -1.87
URM1	YIL008W	YER158C	P40095	573 aa		3.4	□□□□□ -1.87
URM1	YIL008W	CHA4	P43634	648 aa		3.4	□□□□□ -1.87
URM1	YIL008W	TPO2	P53283	614 aa		3.4	□□□□□ -1.87
URM1	YIL008W	SPE1	P08432	466 aa		3.39	□□□□□ -1.87
URM1	YIL008W	PRP9	P19736	530 aa	Known RBP	3.39	□□□□□ -1.87
URM1	YIL008W	NPP1	P25353	742 aa		3.39	□□□□□ -1.87
URM1	YIL008W	CDC48	P25694	835 aa	Known RBP	3.39	□□□□□ -1.87
URM1	YIL008W	SCT1	P32784	759 aa		3.39	□□□□□ -1.87
URM1	YIL008W	ATG19	P35193	415 aa		3.39	□□□□□ -1.87
URM1	YIL008W	YRO2	P38079	344 aa		3.39	□□□□□ -1.87
URM1	YIL008W	PFD1	P46988	109 aa		3.39	□□□□□ -1.87
URM1	YIL008W	NAN1	Q02931	896 aa	Known RBP	3.39	□□□□□ -1.87
URM1	YIL008W	GSF2	Q04697	403 aa	Known RBP	3.39	□□□□□ -1.87
URM1	YIL008W	YPR196W	Q06595	470 aa		3.39	□□□□□ -1.87
URM1	YIL008W	SPO75	Q07798	868 aa		3.39	□□□□□ -1.87
URM1	YIL008W	FMP25	Q08023	583 aa		3.39	□□□□□ -1.87
URM1	YIL008W	HCM1	P25364	564 aa		3.38	□□□□□ -1.87
URM1	YIL008W	DCG1	P32460	244 aa		3.38	□□□□□ -1.87
URM1	YIL008W	HBS1	P32769	611 aa	Known RBP	3.38	□□□□□ -1.87
URM1	YIL008W	AFR1	P33304	620 aa		3.38	□□□□□ -1.87
URM1	YIL008W	YBR238C	P38330	731 aa	Known RBP	3.38	□□□□□ -1.87
URM1	YIL008W	URM1	P40554	99 aa	Predicted RBP	3.38	□□□□□ -1.87
URM1	YIL008W	YKE2	P52553	114 aa		3.38	□□□□□ -1.87
URM1	YIL008W	UTP8	P53276	713 aa	Known RBP	3.38	□□□□□ -1.87
URM1	YIL008W	TUB2	P02557	457 aa	Known RBP	3.37	□□□□□ -1.87
URM1	YIL008W	RPL8B	P29453	256 aa	Known RBP	3.37	□□□□□ -1.87
URM1	YIL008W	CDC11	P32458	415 aa		3.37	□□□□□ -1.87
URM1	YIL008W	ALR2	P43553	858 aa		3.37	□□□□□ -1.87
URM1	YIL008W	IOC3	P43596	787 aa		3.37	□□□□□ -1.87
URM1	YIL008W	RAI1	P53063	387 aa	Known RBP	3.37	□□□□□ -1.87
URM1	YIL008W	LCD1	Q04377	747 aa		3.37	□□□□□ -1.87
URM1	YIL008W	PMA1	P05030	918 aa	Known RBP	3.36	□□□□□ -1.87
URM1	YIL008W	NOT3	P06102	836 aa	Known RBP	3.36	□□□□□ -1.87
URM1	YIL008W	TRM2	P33753	639 aa		3.36	□□□□□ -1.87
URM1	YIL008W	CCM1	P48237	864 aa	Predicted RBP	3.36	□□□□□ -1.87
URM1	YIL008W	EXG2	P52911	562 aa		3.36	□□□□□ -1.87
URM1	YIL008W	NCS6	P53088	359 aa		3.36	□□□□□ -1.87
URM1	YIL008W	ERP6	P53198	216 aa		3.36	□□□□□ -1.87
URM1	YIL008W	BUL2	Q03758	920 aa	Known RBP	3.36	□□□□□ -1.87
URM1	YIL008W	EAF1	Q06337	982 aa		3.36	□□□□□ -1.87
URM1	YIL008W	NTO1	Q12311	748 aa		3.36	□□□□□ -1.87
URM1	YIL008W	KCS1	Q12494	1050 aa		3.36	□□□□□ -1.87
URM1	YIL008W	RAD4	P14736	754 aa		3.35	□□□□□ -1.87
URM1	YIL008W	ARE1	P25628	610 aa		3.35	□□□□□ -1.87
URM1	YIL008W	REC104	P33323	182 aa		3.35	□□□□□ -1.87
URM1	YIL008W	TOK1	P40310	691 aa		3.35	□□□□□ -1.87
URM1	YIL008W	PHO23	P50947	330 aa		3.35	□□□□□ -1.87
URM1	YIL008W	VPS30	Q02948	557 aa		3.35	□□□□□ -1.87
URM1	YIL008W	UBX5	Q06682	500 aa		3.35	□□□□□ -1.87
URM1	YIL008W	WHI4	Q07655	649 aa	Known RBP	3.35	□□□□□ -1.87
URM1	YIL008W	UPC2	Q12151	913 aa		3.35	□□□□□ -1.87
URM1	YIL008W	YPR071W	Q12346	211 aa		3.35	□□□□□ -1.87
URM1	YIL008W	NPC2	Q12408	173 aa		3.35	□□□□□ -1.87
URM1	YIL008W	OSH2	Q12451	1283 aa		3.35	□□□□□ -1.87
URM1	YIL008W	HSP60	P19882	572 aa	Known RBP	3.34	□□□□□ -1.87
URM1	YIL008W	PMI40	P29952	429 aa	Known RBP	3.34	□□□□□ -1.87
URM1	YIL008W	STE13	P33894	931 aa		3.34	□□□□□ -1.87
URM1	YIL008W	ERT1	P38140	529 aa		3.34	□□□□□ -1.87
URM1	YIL008W	YBR284W	P38150	797 aa		3.34	□□□□□ -1.87
URM1	YIL008W	YJL049W	P47048	450 aa		3.34	□□□□□ -1.87
URM1	YIL008W	URN1	Q06525	465 aa	Known RBP	3.34	□□□□□ -1.87
URM1	YIL008W	GUP2	Q08929	609 aa		3.34	□□□□□ -1.87
URM1	YIL008W	PUS9	Q12069	462 aa		3.34	□□□□□ -1.87
URM1	YIL008W	HBN1	Q96VH4	193 aa		3.34	□□□□□ -1.87
URM1	YIL008W	PFK1	P16861	987 aa	Known RBP	3.33	□□□□□ -1.88
URM1	YIL008W	RFA1	P22336	621 aa	Known RBP	3.33	□□□□□ -1.88
URM1	YIL008W	SED4	P25365	1065 aa		3.33	□□□□□ -1.88
URM1	YIL008W	DEF1	P35732	738 aa	Known RBP	3.33	□□□□□ -1.88
URM1	YIL008W	PET10	P36139	283 aa		3.33	□□□□□ -1.88
URM1	YIL008W	TIM54	P47045	478 aa		3.33	□□□□□ -1.88
URM1	YIL008W	MSE1	P48525	536 aa		3.33	□□□□□ -1.88
URM1	YIL008W	YGR125W	P53273	1036 aa		3.33	□□□□□ -1.88
URM1	YIL008W	SSL1	Q04673	461 aa	Predicted RBP	3.33	□□□□□ -1.88
URM1	YIL008W	ENB1	Q08299	606 aa		3.33	□□□□□ -1.88
URM1	YIL008W	PNS1	Q12412	539 aa		3.33	□□□□□ -1.88
URM1	YIL008W	CIT1	P00890	479 aa		3.32	□□□□□ -1.88
URM1	YIL008W	FBP1	P09201	348 aa		3.32	□□□□□ -1.88
URM1	YIL008W	MSD1	P15179	658 aa	Known RBP	3.32	□□□□□ -1.88
URM1	YIL008W	KAR4	P25583	335 aa		3.32	□□□□□ -1.88
URM1	YIL008W	RPD3	P32561	433 aa		3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 91 ms