RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W MTC1P47018 478 aaKnown RBP9.27□□□□□ -0.93
URM1YIL008W DRS1P32892 752 aaKnown RBP8.94□□□□□ -0.98
URM1YIL008W FAP1P53971 965 aa8.86□□□□□ -0.99
URM1YIL008W PRY3P47033 881 aa8.41□□□□□ -1.06
URM1YIL008W YCK3P39962 524 aa8.15□□□□□ -1.1
URM1YIL008W AAD16Q02895 342 aa8.07□□□□□ -1.12
URM1YIL008W PRI1P10363 409 aa8.05□□□□□ -1.12
URM1YIL008W HAA1Q12753 694 aaKnown RBP7.89□□□□□ -1.15
URM1YIL008W DIP2Q12220 943 aaPredicted RBP7.74□□□□□ -1.17
URM1YIL008W ISW2Q08773 1120 aa7.63□□□□□ -1.19
URM1YIL008W BFR2Q06631 534 aaKnown RBP7.57□□□□□ -1.2
URM1YIL008W AVT3P36062 692 aa7.53□□□□□ -1.2
URM1YIL008W RPG1P38249 964 aaKnown RBP7.53□□□□□ -1.2
URM1YIL008W TSR3Q12094 313 aaKnown RBP7.52□□□□□ -1.21
URM1YIL008W RSE1Q04693 1361 aaKnown RBP7.41□□□□□ -1.22
URM1YIL008W MRPL32P25348 183 aa7.19□□□□□ -1.26
URM1YIL008W YGL015CP33199 130 aa7.16□□□□□ -1.26
URM1YIL008W RPL17AP05740 184 aaKnown RBP7.15□□□□□ -1.26
URM1YIL008W RPL17BP46990 184 aaKnown RBP7.15□□□□□ -1.26
URM1YIL008W REB1P21538 810 aa7.1□□□□□ -1.27
URM1YIL008W BUD31P25337 157 aaPredicted RBP6.97□□□□□ -1.29
URM1YIL008W TFA1P36100 482 aa6.89□□□□□ -1.31
URM1YIL008W SPT21P35209 758 aa6.85□□□□□ -1.31
URM1YIL008W CDC27P38042 758 aa6.78□□□□□ -1.32
URM1YIL008W YKR023WP36119 530 aaKnown RBP6.71□□□□□ -1.34
URM1YIL008W RIM101P33400 625 aa6.7□□□□□ -1.34
URM1YIL008W UBP10P53874 792 aaPredicted RBP6.65□□□□□ -1.34
URM1YIL008W MAP2P38174 421 aaKnown RBP6.63□□□□□ -1.35
URM1YIL008W TFC8Q12308 588 aa6.59□□□□□ -1.35
URM1YIL008W HOP09932 586 aa6.57□□□□□ -1.36
URM1YIL008W DCD1P06773 312 aa6.52□□□□□ -1.37
URM1YIL008W OXP1P28273 1286 aa6.47□□□□□ -1.37
URM1YIL008W SIS1P25294 352 aaKnown RBP6.46□□□□□ -1.38
URM1YIL008W YIL055CP40523 627 aaKnown RBP6.4□□□□□ -1.38
URM1YIL008W TGL3P40308 642 aa6.39□□□□□ -1.39
URM1YIL008W BCH2P36122 765 aa6.38□□□□□ -1.39
URM1YIL008W PTP3P40048 928 aa6.36□□□□□ -1.39
URM1YIL008W UBP9P39967 754 aa6.35□□□□□ -1.39
URM1YIL008W SCY1P53009 804 aa6.34□□□□□ -1.39
URM1YIL008W YAH1Q12184 172 aaKnown RBP6.32□□□□□ -1.4
URM1YIL008W TIF4632P39936 914 aaKnown RBP6.31□□□□□ -1.4
URM1YIL008W RSM7P47150 247 aa6.29□□□□□ -1.4
URM1YIL008W SLX5P32828 619 aaKnown RBP6.27□□□□□ -1.41
URM1YIL008W EPS1P40557 701 aa6.24□□□□□ -1.41
URM1YIL008W SSP1P38871 571 aa6.23□□□□□ -1.41
URM1YIL008W YLR271WQ06152 274 aa6.23□□□□□ -1.41
URM1YIL008W AI2P03876 854 aa6.21□□□□□ -1.42
URM1YIL008W BDF1P35817 686 aa6.21□□□□□ -1.42
URM1YIL008W BBC1P47068 1157 aa6.2□□□□□ -1.42
URM1YIL008W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
URM1YIL008W MST1P07236 462 aa6.1□□□□□ -1.43
URM1YIL008W PSD2P53037 1138 aaKnown RBP6.1□□□□□ -1.43
URM1YIL008W MGA2P40578 1113 aa6.06□□□□□ -1.44
URM1YIL008W CST9Q06032 482 aa6.02□□□□□ -1.45
URM1YIL008W YBL029C-AQ3E756 94 aa6.02□□□□□ -1.45
URM1YIL008W MRM1P25270 412 aa5.99□□□□□ -1.45
URM1YIL008W NSR1P27476 414 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45 RIP-Chip
URM1YIL008W VNX1P42839 908 aa5.96□□□□□ -1.46
URM1YIL008W YOR238WQ08634 303 aa5.94□□□□□ -1.46
URM1YIL008W YAP5P40574 245 aa5.93□□□□□ -1.46
URM1YIL008W RTG3P38165 486 aa5.9□□□□□ -1.46
URM1YIL008W AIR2Q12476 344 aaKnown RBP5.89□□□□□ -1.47
URM1YIL008W VPS29P38759 282 aa5.86□□□□□ -1.47
URM1YIL008W RCR1P38212 213 aa5.84□□□□□ -1.47
URM1YIL008W YMR1P47147 688 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
URM1YIL008W FKH1P40466 484 aa5.83□□□□□ -1.48
URM1YIL008W SPP1Q03012 353 aa5.83□□□□□ -1.48
URM1YIL008W PIB1Q06651 286 aa5.81□□□□□ -1.48
URM1YIL008W DBP1P24784 617 aaKnown RBP5.8□□□□□ -1.48
URM1YIL008W GTT3P39996 337 aa5.79□□□□□ -1.48
URM1YIL008W STS1P38637 319 aa5.78□□□□□ -1.48
URM1YIL008W YFR006WP43590 535 aa5.77□□□□□ -1.49
URM1YIL008W RAM2P29703 316 aa5.76□□□□□ -1.49
URM1YIL008W TIF11P38912 153 aaKnown RBP5.76□□□□□ -1.49
URM1YIL008W WSC3Q12215 556 aa5.75□□□□□ -1.49
URM1YIL008W YJL171CP46992 396 aa5.74□□□□□ -1.49
URM1YIL008W VMA1P17255 1071 aaKnown RBP5.71□□□□□ -1.5
URM1YIL008W MAK11P20484 414 aaKnown RBP5.71□□□□□ -1.5
URM1YIL008W IOC2Q12072 812 aa5.71□□□□□ -1.5
URM1YIL008W SAM3Q08986 587 aa5.67□□□□□ -1.5
URM1YIL008W MSB4Q12317 492 aa5.67□□□□□ -1.5
URM1YIL008W YOL036WQ08206 761 aa5.66□□□□□ -1.5
URM1YIL008W LDB19Q12502 818 aa5.66□□□□□ -1.5
URM1YIL008W BMT6Q12291 365 aa5.65□□□□□ -1.5
URM1YIL008W MIF2P35201 549 aa5.64□□□□□ -1.51
URM1YIL008W SET4P42948 560 aa5.64□□□□□ -1.51
URM1YIL008W COQ8P27697 501 aa5.63□□□□□ -1.51
URM1YIL008W EAP1P36041 632 aaKnown RBP5.63□□□□□ -1.51
URM1YIL008W ULI1P43604 169 aa5.63□□□□□ -1.51
URM1YIL008W EDS1P38073 919 aa5.61□□□□□ -1.51
URM1YIL008W GYP5Q12344 894 aa5.61□□□□□ -1.51
URM1YIL008W ABP1P15891 592 aaKnown RBP5.59□□□□□ -1.51
URM1YIL008W PTC3P34221 468 aaKnown RBP5.59□□□□□ -1.51
URM1YIL008W NOP53Q12080 455 aaKnown RBP5.59□□□□□ -1.51
URM1YIL008W TRP5P00931 707 aaKnown RBP5.58□□□□□ -1.52
URM1YIL008W GRE2Q12068 342 aaKnown RBP5.58□□□□□ -1.52
URM1YIL008W DCW1P36091 449 aa5.56□□□□□ -1.52
URM1YIL008W SET1P38827 1080 aaKnown RBP5.56□□□□□ -1.52
URM1YIL008W HTA1P04911 132 aaKnown RBP5.55□□□□□ -1.52
URM1YIL008W HTA2P04912 132 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms