RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W VPS53P47061 822 aa12.01□□□□□ -0.49
TRM5YHR070W HFM1P51979 1187 aa12.01□□□□□ -0.49
TRM5YHR070W CAF130P53280 1122 aaPredicted RBP12.01□□□□□ -0.49
TRM5YHR070W APL4Q12028 832 aa12.01□□□□□ -0.49
TRM5YHR070W CWC2Q12046 339 aaPredicted RBP12.01□□□□□ -0.49
TRM5YHR070W SCP160P06105 1222 aaKnown RBP RIP-Chip data12□□□□□ -0.49not detected
TRM5YHR070W DED1P06634 604 aaKnown RBP12□□□□□ -0.49
TRM5YHR070W YSC83P32792 385 aa12□□□□□ -0.49
TRM5YHR070W ATG19P35193 415 aa12□□□□□ -0.49
TRM5YHR070W MNR2P35724 969 aa12□□□□□ -0.49
TRM5YHR070W ERC1P38767 581 aa12□□□□□ -0.49
TRM5YHR070W CCM1P48237 864 aaPredicted RBP12□□□□□ -0.49
TRM5YHR070W SMC5Q08204 1093 aa12□□□□□ -0.49
TRM5YHR070W MET7Q08645 548 aa12□□□□□ -0.49
TRM5YHR070W PHO8P11491 566 aa11.99□□□□□ -0.49
TRM5YHR070W COQ9Q05779 260 aa11.99□□□□□ -0.49
TRM5YHR070W GPI13Q07830 1017 aa11.99□□□□□ -0.49
TRM5YHR070W NOC3Q07896 663 aaPredicted RBP11.99□□□□□ -0.49
TRM5YHR070W EFM2P38347 419 aa11.98□□□□□ -0.49
TRM5YHR070W AVT1P47082 602 aa11.98□□□□□ -0.49
TRM5YHR070W MDR1P53258 950 aa11.98□□□□□ -0.49
TRM5YHR070W CTR9P89105 1077 aa11.98□□□□□ -0.49
TRM5YHR070W FAL1Q12099 399 aaKnown RBP11.98□□□□□ -0.49
TRM5YHR070W YLL058WQ12198 575 aa11.98□□□□□ -0.49
TRM5YHR070W SRF1Q12516 437 aa11.98□□□□□ -0.49
TRM5YHR070W POX1P13711 748 aa11.97□□□□□ -0.49
TRM5YHR070W APL1P27351 700 aa11.97□□□□□ -0.49
TRM5YHR070W NAM7P30771 971 aaKnown RBP11.97□□□□□ -0.49
TRM5YHR070W SPC110P32380 944 aa11.97□□□□□ -0.49
TRM5YHR070W COT1P32798 439 aa11.97□□□□□ -0.49
TRM5YHR070W MFT1P33441 392 aaKnown RBP11.97□□□□□ -0.49
TRM5YHR070W MNN4P36044 1178 aa11.97□□□□□ -0.49
TRM5YHR070W LEO1P38439 464 aa11.97□□□□□ -0.49
TRM5YHR070W VFA1P40080 203 aa11.97□□□□□ -0.49
TRM5YHR070W LCB2P40970 561 aa11.97□□□□□ -0.49
TRM5YHR070W TAM41P53230 385 aa11.97□□□□□ -0.49
TRM5YHR070W DUS1P53759 423 aaKnown RBP11.97□□□□□ -0.49
TRM5YHR070W ATG9Q12142 997 aa11.97□□□□□ -0.49
TRM5YHR070W SSB1P11484 613 aaKnown RBP11.96□□□□□ -0.49
TRM5YHR070W KIN82P25341 720 aa11.96□□□□□ -0.49
TRM5YHR070W RME1P32338 300 aaKnown RBP11.96□□□□□ -0.49
TRM5YHR070W TIM23P32897 222 aa11.96□□□□□ -0.49
TRM5YHR070W FLR1P38124 548 aa11.96□□□□□ -0.49
TRM5YHR070W SSB2P40150 613 aaKnown RBP11.96□□□□□ -0.49
TRM5YHR070W YLR287CQ05881 355 aa11.96□□□□□ -0.49
TRM5YHR070W YCG1Q06680 1035 aa11.96□□□□□ -0.49
TRM5YHR070W HMI1Q12039 706 aa11.96□□□□□ -0.49
TRM5YHR070W IRE1P32361 1115 aa11.96□□□□□ -0.5
TRM5YHR070W PCH2P38126 564 aa11.96□□□□□ -0.5
TRM5YHR070W RRP6Q12149 733 aaKnown RBP11.96□□□□□ -0.5
TRM5YHR070W RTT102P53330 157 aa11.95□□□□□ -0.5
TRM5YHR070W UME1Q03010 460 aa11.95□□□□□ -0.5
TRM5YHR070W IES4Q08561 116 aa11.95□□□□□ -0.5
TRM5YHR070W EFT1P32324 842 aaKnown RBP11.94□□□□□ -0.5
TRM5YHR070W VPS35P34110 944 aa11.94□□□□□ -0.5
TRM5YHR070W EAF5P39995 279 aa11.94□□□□□ -0.5
TRM5YHR070W STU2P46675 888 aa11.94□□□□□ -0.5
TRM5YHR070W RLP24Q07915 199 aaKnown RBP11.94□□□□□ -0.5
TRM5YHR070W PLP2Q12017 286 aa11.94□□□□□ -0.5
TRM5YHR070W CDC53Q12018 815 aaKnown RBP11.94□□□□□ -0.5
TRM5YHR070W ICL2Q12031 575 aa11.94□□□□□ -0.5
TRM5YHR070W MAS2P11914 482 aa11.93□□□□□ -0.5
TRM5YHR070W KSP1P38691 1029 aaKnown RBP11.93□□□□□ -0.5
TRM5YHR070W FIG4P42837 879 aa11.93□□□□□ -0.5
TRM5YHR070W PSP2P50109 593 aaKnown RBP11.93□□□□□ -0.5
TRM5YHR070W GIR2Q03768 265 aaPredicted RBP11.93□□□□□ -0.5
TRM5YHR070W MLH2Q07980 695 aa11.93□□□□□ -0.5
TRM5YHR070W PPR1P07272 904 aaPredicted RBP11.92□□□□□ -0.5
TRM5YHR070W CHS2P14180 963 aa11.92□□□□□ -0.5
TRM5YHR070W SPO12P17123 173 aa11.92□□□□□ -0.5
TRM5YHR070W UBC1P21734 215 aaKnown RBP11.92□□□□□ -0.5
TRM5YHR070W RRP43P25359 394 aaPredicted RBP11.92□□□□□ -0.5
TRM5YHR070W KTR2P33550 425 aa11.92□□□□□ -0.5
TRM5YHR070W OSW7P43611 510 aa11.92□□□□□ -0.5
TRM5YHR070W ERG5P54781 538 aa11.92□□□□□ -0.5
TRM5YHR070W TIM8P57744 87 aa11.92□□□□□ -0.5
TRM5YHR070W TUP1P16649 713 aa11.91□□□□□ -0.5
TRM5YHR070W SSD1P24276 1250 aaKnown RBP RIP-Chip data11.91□□□□□ -0.5not detected
TRM5YHR070W DBP1P24784 617 aaKnown RBP11.91□□□□□ -0.5
TRM5YHR070W BCS1P32839 456 aa11.91□□□□□ -0.5
TRM5YHR070W ATG3P40344 310 aa11.91□□□□□ -0.5
TRM5YHR070W PRY3P47033 881 aa11.91□□□□□ -0.5
TRM5YHR070W ALF1P53904 254 aa11.91□□□□□ -0.5
TRM5YHR070W YNL146WP53906 100 aa11.91□□□□□ -0.5
TRM5YHR070W VTC3Q02725 835 aa11.91□□□□□ -0.5
TRM5YHR070W DON1Q05610 365 aa11.91□□□□□ -0.5
TRM5YHR070W VPS38Q05919 439 aa11.91□□□□□ -0.5
TRM5YHR070W ESC2Q06340 456 aa11.91□□□□□ -0.5
TRM5YHR070W NEW1Q08972 1196 aaKnown RBP11.91□□□□□ -0.5
TRM5YHR070W SHQ1P40486 507 aaPredicted RBP11.91□□□□□ -0.5
TRM5YHR070W NCS6P53088 359 aa11.91□□□□□ -0.5
TRM5YHR070W BRE5P53741 515 aaKnown RBP11.91□□□□□ -0.5
TRM5YHR070W YLR297WQ05899 129 aa11.91□□□□□ -0.5
TRM5YHR070W SWI6P09959 803 aa11.9□□□□□ -0.5
TRM5YHR070W MUD1P32605 298 aaKnown RBP11.9□□□□□ -0.5
TRM5YHR070W SMY2P32909 740 aaKnown RBP11.9□□□□□ -0.5
TRM5YHR070W YKL023WP36103 277 aaKnown RBP11.9□□□□□ -0.5
TRM5YHR070W CCC2P38995 1004 aa11.9□□□□□ -0.5
TRM5YHR070W YAP5P40574 245 aa11.9□□□□□ -0.5
TRM5YHR070W IES1P43579 692 aa11.9□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 78.8 ms