RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C CDC48P25694 835 aaKnown RBP5.71□□□□□ -1.5
CUP1-2YHR055C MND2P40577 368 aa5.71□□□□□ -1.5
CUP1-2YHR055C HUL4P40985 892 aa5.71□□□□□ -1.5
CUP1-2YHR055C PSP2P50109 593 aaKnown RBP5.71□□□□□ -1.5
CUP1-2YHR055C YGR012WP53206 393 aa5.71□□□□□ -1.5
CUP1-2YHR055C CDC53Q12018 815 aaKnown RBP5.71□□□□□ -1.5
CUP1-2YHR055C CIT1P00890 479 aa5.7□□□□□ -1.5
CUP1-2YHR055C HSF1P10961 833 aa5.7□□□□□ -1.5
CUP1-2YHR055C STI1P15705 589 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
CUP1-2YHR055C HBS1P32769 611 aaKnown RBP5.7□□□□□ -1.5
CUP1-2YHR055C SRP101P32916 621 aa5.7□□□□□ -1.5
CUP1-2YHR055C POA1P38218 177 aa5.7□□□□□ -1.5
CUP1-2YHR055C CCM1P48237 864 aaPredicted RBP5.7□□□□□ -1.5
CUP1-2YHR055C HUL5P53119 910 aa5.7□□□□□ -1.5
CUP1-2YHR055C SFB2P53953 876 aa5.7□□□□□ -1.5
CUP1-2YHR055C LCD1Q04377 747 aa5.7□□□□□ -1.5
CUP1-2YHR055C DUS4Q06063 367 aa5.7□□□□□ -1.5
CUP1-2YHR055C YOR131CQ12486 218 aa5.7□□□□□ -1.5
CUP1-2YHR055C YOL098CQ12496 1037 aa5.7□□□□□ -1.5
CUP1-2YHR055C YLR358CO13565 187 aa5.69□□□□□ -1.5
CUP1-2YHR055C DOM34P33309 386 aa5.69□□□□□ -1.5
CUP1-2YHR055C THI80P35202 319 aa5.69□□□□□ -1.5
CUP1-2YHR055C YBR284WP38150 797 aa5.69□□□□□ -1.5
CUP1-2YHR055C TSL1P38427 1098 aaKnown RBP5.69□□□□□ -1.5
CUP1-2YHR055C NSE3Q05541 303 aa5.69□□□□□ -1.5
CUP1-2YHR055C BDF2Q07442 638 aa5.69□□□□□ -1.5
CUP1-2YHR055C YDL124WQ07551 312 aaKnown RBP5.69□□□□□ -1.5
CUP1-2YHR055C ACK1Q07622 623 aaPredicted RBP5.69□□□□□ -1.5
CUP1-2YHR055C FLC1Q08967 793 aa5.69□□□□□ -1.5
CUP1-2YHR055C SRP40P32583 406 aaPredicted RBP5.68□□□□□ -1.5
CUP1-2YHR055C NPP2P39997 493 aa5.68□□□□□ -1.5
CUP1-2YHR055C TPO1Q07824 586 aa5.68□□□□□ -1.5
CUP1-2YHR055C YPR071WQ12346 211 aa5.68□□□□□ -1.5
CUP1-2YHR055C NPP1P25353 742 aa5.67□□□□□ -1.5
CUP1-2YHR055C REC104P33323 182 aa5.67□□□□□ -1.5
CUP1-2YHR055C GGA2P38817 585 aaKnown RBP5.67□□□□□ -1.5
CUP1-2YHR055C GCV2P49095 1034 aa5.67□□□□□ -1.5
CUP1-2YHR055C VPS30Q02948 557 aa5.67□□□□□ -1.5
CUP1-2YHR055C CDA1Q06702 301 aa5.67□□□□□ -1.5
CUP1-2YHR055C HBN1Q96VH4 193 aa5.67□□□□□ -1.5
CUP1-2YHR055C GAL11P19659 1081 aa5.66□□□□□ -1.5
CUP1-2YHR055C PRE10P21242 288 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
CUP1-2YHR055C EMC1P25574 760 aa5.66□□□□□ -1.5
CUP1-2YHR055C CDC20P26309 610 aa5.66□□□□□ -1.5
CUP1-2YHR055C OCA5P38738 679 aa5.66□□□□□ -1.5
CUP1-2YHR055C VPS62P53285 467 aa5.66□□□□□ -1.5
CUP1-2YHR055C HMI1Q12039 706 aa5.66□□□□□ -1.5
CUP1-2YHR055C SPE1P08432 466 aa5.65□□□□□ -1.5
CUP1-2YHR055C RFA1P22336 621 aaKnown RBP5.65□□□□□ -1.5
CUP1-2YHR055C AFR1P33304 620 aa5.65□□□□□ -1.5
CUP1-2YHR055C ATG19P35193 415 aa5.65□□□□□ -1.5
CUP1-2YHR055C PET10P36139 283 aa5.65□□□□□ -1.5
CUP1-2YHR055C YBR238CP38330 731 aaKnown RBP5.65□□□□□ -1.5
CUP1-2YHR055C YHR020WP38708 688 aaKnown RBP5.65□□□□□ -1.5
CUP1-2YHR055C RSP5P39940 809 aaKnown RBP5.65□□□□□ -1.5
CUP1-2YHR055C TOK1P40310 691 aa5.65□□□□□ -1.5
CUP1-2YHR055C IOC3P43596 787 aa5.65□□□□□ -1.5
CUP1-2YHR055C MET12P46151 657 aa5.65□□□□□ -1.5
CUP1-2YHR055C RAI1P53063 387 aaKnown RBP5.65□□□□□ -1.5
CUP1-2YHR055C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5 RIP-Chip
CUP1-2YHR055C YAP6Q03935 383 aa5.65□□□□□ -1.5
CUP1-2YHR055C ADY3Q07732 790 aa5.65□□□□□ -1.5
CUP1-2YHR055C NOP12Q08208 459 aaKnown RBP5.65□□□□□ -1.5
CUP1-2YHR055C NOT3P06102 836 aaKnown RBP5.64□□□□□ -1.51
CUP1-2YHR055C CDC6P09119 513 aa5.64□□□□□ -1.51
CUP1-2YHR055C YKL091CP33324 310 aaKnown RBP5.64□□□□□ -1.51
CUP1-2YHR055C YKE2P52553 114 aa5.64□□□□□ -1.51
CUP1-2YHR055C ESC8Q08119 714 aa5.64□□□□□ -1.51
CUP1-2YHR055C HIS5P07172 385 aa5.63□□□□□ -1.51
CUP1-2YHR055C TOM70P07213 617 aaKnown RBP5.63□□□□□ -1.51
CUP1-2YHR055C MSD1P15179 658 aaKnown RBP5.63□□□□□ -1.51
CUP1-2YHR055C TAF8Q03750 510 aa5.63□□□□□ -1.51
CUP1-2YHR055C BUL2Q03758 920 aaKnown RBP5.63□□□□□ -1.51
CUP1-2YHR055C YLR224WQ05947 369 aa5.63□□□□□ -1.51
CUP1-2YHR055C FLR1P38124 548 aa5.62□□□□□ -1.51
CUP1-2YHR055C ERT1P38140 529 aa5.62□□□□□ -1.51
CUP1-2YHR055C NIT3P49954 291 aa5.62□□□□□ -1.51
CUP1-2YHR055C CLU1Q03690 1277 aaKnown RBP5.62□□□□□ -1.51
CUP1-2YHR055C CAN1P04817 590 aa5.61□□□□□ -1.51
CUP1-2YHR055C TOP3P13099 656 aa5.61□□□□□ -1.51
CUP1-2YHR055C YKL222CP35995 705 aa5.61□□□□□ -1.51
CUP1-2YHR055C MPT5P39016 859 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
CUP1-2YHR055C CHZ1P40019 153 aaPredicted RBP5.61□□□□□ -1.51
CUP1-2YHR055C UBP6P43593 499 aaKnown RBP5.61□□□□□ -1.51
CUP1-2YHR055C TMA10Q06177 86 aa5.61□□□□□ -1.51
CUP1-2YHR055C STE11P23561 717 aa5.6□□□□□ -1.51
CUP1-2YHR055C STE13P33894 931 aa5.6□□□□□ -1.51
CUP1-2YHR055C RPS9AO13516 197 aaKnown RBP5.59□□□□□ -1.51
CUP1-2YHR055C MPH2P0CD99 609 aa5.59□□□□□ -1.51
CUP1-2YHR055C PLB1P39105 664 aa5.59□□□□□ -1.51
CUP1-2YHR055C GIP4P39732 760 aa5.59□□□□□ -1.51
CUP1-2YHR055C CHA4P43634 648 aa5.59□□□□□ -1.51
CUP1-2YHR055C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
CUP1-2YHR055C MNN10P50108 393 aaKnown RBP5.59□□□□□ -1.51
CUP1-2YHR055C MCM6P53091 1017 aaKnown RBP5.59□□□□□ -1.51
CUP1-2YHR055C RPN4Q03465 531 aa5.59□□□□□ -1.51
CUP1-2YHR055C LST4P34239 828 aa5.58□□□□□ -1.52
CUP1-2YHR055C BET3P36149 193 aa5.58□□□□□ -1.52
CUP1-2YHR055C CEP3P40969 608 aa5.58□□□□□ -1.52
CUP1-2YHR055C YCR015CP25616 317 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms