RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C MTC1P47018 478 aaKnown RBP14.71□□□□□ -0.05
CUP1-2YHR055C DRS1P32892 752 aaKnown RBP14.49□□□□□ -0.09
CUP1-2YHR055C FAP1P53971 965 aa12.49□□□□□ -0.41
CUP1-2YHR055C DIP2Q12220 943 aaPredicted RBP12.43□□□□□ -0.42
CUP1-2YHR055C BFR2Q06631 534 aaKnown RBP12.4□□□□□ -0.42
CUP1-2YHR055C AVT3P36062 692 aa12.13□□□□□ -0.47
CUP1-2YHR055C ISW2Q08773 1120 aa12.09□□□□□ -0.47
CUP1-2YHR055C PRI1P10363 409 aa11.98□□□□□ -0.49
CUP1-2YHR055C RPG1P38249 964 aaKnown RBP11.9□□□□□ -0.5
CUP1-2YHR055C AAD16Q02895 342 aa11.85□□□□□ -0.51
CUP1-2YHR055C RSE1Q04693 1361 aaKnown RBP11.84□□□□□ -0.51
CUP1-2YHR055C PRY3P47033 881 aa11.67□□□□□ -0.54
CUP1-2YHR055C RPL17AP05740 184 aaKnown RBP11.41□□□□□ -0.58
CUP1-2YHR055C TFA1P36100 482 aa11.41□□□□□ -0.58
CUP1-2YHR055C RPL17BP46990 184 aaKnown RBP11.41□□□□□ -0.58
CUP1-2YHR055C TSR3Q12094 313 aaKnown RBP11.37□□□□□ -0.59
CUP1-2YHR055C REB1P21538 810 aa11.33□□□□□ -0.6
CUP1-2YHR055C HAA1Q12753 694 aaKnown RBP11□□□□□ -0.65
CUP1-2YHR055C MRPL32P25348 183 aa10.98□□□□□ -0.65
CUP1-2YHR055C YCK3P39962 524 aa10.9□□□□□ -0.66
CUP1-2YHR055C SPT21P35209 758 aa10.89□□□□□ -0.67
CUP1-2YHR055C RIM101P33400 625 aa10.7□□□□□ -0.7
CUP1-2YHR055C YKR023WP36119 530 aaKnown RBP10.62□□□□□ -0.71
CUP1-2YHR055C CDC27P38042 758 aa10.47□□□□□ -0.73
CUP1-2YHR055C HOP09932 586 aa10.43□□□□□ -0.74
CUP1-2YHR055C TFC8Q12308 588 aa10.42□□□□□ -0.74
CUP1-2YHR055C DCD1P06773 312 aa10.34□□□□□ -0.75
CUP1-2YHR055C OXP1P28273 1286 aa10.34□□□□□ -0.75
CUP1-2YHR055C YGL015CP33199 130 aa10.32□□□□□ -0.76
CUP1-2YHR055C YIL055CP40523 627 aaKnown RBP10.3□□□□□ -0.76
CUP1-2YHR055C PTP3P40048 928 aa10.24□□□□□ -0.77
CUP1-2YHR055C YAH1Q12184 172 aaKnown RBP10.21□□□□□ -0.77
CUP1-2YHR055C UBP10P53874 792 aaPredicted RBP10.14□□□□□ -0.79
CUP1-2YHR055C SSP1P38871 571 aa10.12□□□□□ -0.79
CUP1-2YHR055C BCH2P36122 765 aa10.1□□□□□ -0.79
CUP1-2YHR055C MAP2P38174 421 aaKnown RBP10.09□□□□□ -0.79
CUP1-2YHR055C RSM7P47150 247 aa10.09□□□□□ -0.79
CUP1-2YHR055C SCY1P53009 804 aa10.04□□□□□ -0.8
CUP1-2YHR055C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
CUP1-2YHR055C YLR271WQ06152 274 aa10.01□□□□□ -0.81
CUP1-2YHR055C BBC1P47068 1157 aa9.95□□□□□ -0.82
CUP1-2YHR055C AI2P03876 854 aa9.93□□□□□ -0.82
CUP1-2YHR055C EPS1P40557 701 aa9.93□□□□□ -0.82
CUP1-2YHR055C SLX5P32828 619 aaKnown RBP9.89□□□□□ -0.83
CUP1-2YHR055C BDF1P35817 686 aa9.85□□□□□ -0.83
CUP1-2YHR055C MGA2P40578 1113 aa9.79□□□□□ -0.84
CUP1-2YHR055C PSD2P53037 1138 aaKnown RBP9.78□□□□□ -0.84
CUP1-2YHR055C TIF4632P39936 914 aaKnown RBP9.77□□□□□ -0.85
CUP1-2YHR055C CST9Q06032 482 aa9.69□□□□□ -0.86
CUP1-2YHR055C TGL3P40308 642 aa9.66□□□□□ -0.86
CUP1-2YHR055C MRM1P25270 412 aa9.62□□□□□ -0.87
CUP1-2YHR055C RTG3P38165 486 aa9.48□□□□□ -0.89
CUP1-2YHR055C RQC2Q12532 1038 aaKnown RBP9.46□□□□□ -0.9
CUP1-2YHR055C NSR1P27476 414 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9 RIP-Chip
CUP1-2YHR055C YAP5P40574 245 aa9.42□□□□□ -0.9
CUP1-2YHR055C YOR238WQ08634 303 aa9.39□□□□□ -0.91
CUP1-2YHR055C RCR1P38212 213 aa9.37□□□□□ -0.91
CUP1-2YHR055C VPS29P38759 282 aa9.35□□□□□ -0.91
CUP1-2YHR055C YMR1P47147 688 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
CUP1-2YHR055C MST1P07236 462 aa9.29□□□□□ -0.92
CUP1-2YHR055C RAM2P29703 316 aa9.29□□□□□ -0.92
CUP1-2YHR055C DBP1P24784 617 aaKnown RBP9.28□□□□□ -0.92
CUP1-2YHR055C DMA1P38823 416 aa9.28□□□□□ -0.92
CUP1-2YHR055C PIB1Q06651 286 aa9.26□□□□□ -0.93
CUP1-2YHR055C YFR006WP43590 535 aa9.25□□□□□ -0.93
CUP1-2YHR055C STS1P38637 319 aa9.23□□□□□ -0.93
CUP1-2YHR055C GTT3P39996 337 aa9.23□□□□□ -0.93
CUP1-2YHR055C MAK11P20484 414 aaKnown RBP9.22□□□□□ -0.93
CUP1-2YHR055C UBP9P39967 754 aa9.21□□□□□ -0.94
CUP1-2YHR055C VMA1P17255 1071 aaKnown RBP9.11□□□□□ -0.95
CUP1-2YHR055C MIF2P35201 549 aa9.11□□□□□ -0.95
CUP1-2YHR055C BUD31P25337 157 aaPredicted RBP9.09□□□□□ -0.95
CUP1-2YHR055C COQ8P27697 501 aa9.09□□□□□ -0.95
CUP1-2YHR055C WSC3Q12215 556 aa9.08□□□□□ -0.96
CUP1-2YHR055C SET1P38827 1080 aaKnown RBP9.06□□□□□ -0.96
CUP1-2YHR055C YBL029C-AQ3E756 94 aa9.06□□□□□ -0.96
CUP1-2YHR055C SAM3Q08986 587 aa9.02□□□□□ -0.97
CUP1-2YHR055C EDS1P38073 919 aa9.01□□□□□ -0.97
CUP1-2YHR055C NOP53Q12080 455 aaKnown RBP9.01□□□□□ -0.97
CUP1-2YHR055C VNX1P42839 908 aa9□□□□□ -0.97
CUP1-2YHR055C YOL036WQ08206 761 aa9□□□□□ -0.97
CUP1-2YHR055C MSB4Q12317 492 aa9□□□□□ -0.97
CUP1-2YHR055C PTC3P34221 468 aaKnown RBP8.99□□□□□ -0.97
CUP1-2YHR055C SET4P42948 560 aa8.98□□□□□ -0.97
CUP1-2YHR055C SPP1Q03012 353 aa8.97□□□□□ -0.97
CUP1-2YHR055C GYP5Q12344 894 aa8.97□□□□□ -0.97
CUP1-2YHR055C IFH1P39520 1085 aa8.96□□□□□ -0.98
CUP1-2YHR055C GRE2Q12068 342 aaKnown RBP8.96□□□□□ -0.98
CUP1-2YHR055C ABP1P15891 592 aaKnown RBP8.94□□□□□ -0.98
CUP1-2YHR055C EAP1P36041 632 aaKnown RBP8.94□□□□□ -0.98
CUP1-2YHR055C ATH1P48016 1211 aa8.94□□□□□ -0.98
CUP1-2YHR055C TIF11P38912 153 aaKnown RBP8.93□□□□□ -0.98
CUP1-2YHR055C GUT1P32190 709 aa8.89□□□□□ -0.99
CUP1-2YHR055C ULI1P43604 169 aa8.89□□□□□ -0.99
CUP1-2YHR055C DCW1P36091 449 aa8.88□□□□□ -0.99
CUP1-2YHR055C HTA1P04911 132 aaKnown RBP8.87□□□□□ -0.99
CUP1-2YHR055C HTA2P04912 132 aa8.87□□□□□ -0.99
CUP1-2YHR055C YPR148CQ06523 435 aa8.86□□□□□ -0.99
CUP1-2YHR055C SAS10Q12136 610 aaPredicted RBP8.86□□□□□ -0.99
CUP1-2YHR055C VPS70P47161 811 aa8.84□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms