RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W DBP5P20449 482 aaKnown RBP6.01□□□□□ -1.45
SHE10YGL228W MNR2P35724 969 aa6.01□□□□□ -1.45
SHE10YGL228W CTM1P38818 585 aa6.01□□□□□ -1.45
SHE10YGL228W YEL025CP39991 1188 aa6.01□□□□□ -1.45
SHE10YGL228W MXR1P40029 184 aa6.01□□□□□ -1.45
SHE10YGL228W BRE5P53741 515 aaKnown RBP6.01□□□□□ -1.45
SHE10YGL228W ROD1Q02805 837 aa6.01□□□□□ -1.45
SHE10YGL228W SPO75Q07798 868 aa6.01□□□□□ -1.45
SHE10YGL228W NOC3Q07896 663 aaPredicted RBP6.01□□□□□ -1.45
SHE10YGL228W MET7Q08645 548 aa6.01□□□□□ -1.45
SHE10YGL228W APL4Q12028 832 aa6.01□□□□□ -1.45
SHE10YGL228W CWC2Q12046 339 aaPredicted RBP6.01□□□□□ -1.45
SHE10YGL228W YLL058WQ12198 575 aa6.01□□□□□ -1.45
SHE10YGL228W VPS13Q07878 3144 aa6□□□□□ -1.45
SHE10YGL228W PCK1P10963 549 aa6□□□□□ -1.45
SHE10YGL228W MAS2P11914 482 aa6□□□□□ -1.45
SHE10YGL228W CYC8P14922 966 aa6□□□□□ -1.45
SHE10YGL228W PHO13P19881 312 aa6□□□□□ -1.45
SHE10YGL228W SPO11P23179 398 aa6□□□□□ -1.45
SHE10YGL228W KIN82P25341 720 aa6□□□□□ -1.45
SHE10YGL228W IRE1P32361 1115 aa6□□□□□ -1.45
SHE10YGL228W YSC83P32792 385 aa6□□□□□ -1.45
SHE10YGL228W BCS1P32839 456 aa6□□□□□ -1.45
SHE10YGL228W HFM1P51979 1187 aa6□□□□□ -1.45
SHE10YGL228W TAM41P53230 385 aa6□□□□□ -1.45
SHE10YGL228W COQ9Q05779 260 aa6□□□□□ -1.45
SHE10YGL228W MAK16P10962 306 aaPredicted RBP5.99□□□□□ -1.45
SHE10YGL228W MRF1P30775 413 aaPredicted RBP5.99□□□□□ -1.45
SHE10YGL228W ATG19P35193 415 aa5.99□□□□□ -1.45
SHE10YGL228W SAP190P36123 1033 aa5.99□□□□□ -1.45
SHE10YGL228W KSP1P38691 1029 aaKnown RBP5.99□□□□□ -1.45
SHE10YGL228W SAD1P43589 448 aa5.99□□□□□ -1.45
SHE10YGL228W CCM1P48237 864 aaPredicted RBP5.99□□□□□ -1.45
SHE10YGL228W CAF130P53280 1122 aaPredicted RBP5.99□□□□□ -1.45
SHE10YGL228W MED1Q12321 566 aa5.99□□□□□ -1.45
SHE10YGL228W SRF1Q12516 437 aa5.99□□□□□ -1.45
SHE10YGL228W PHO8P11491 566 aa5.99□□□□□ -1.45
SHE10YGL228W DBP1P24784 617 aaKnown RBP5.99□□□□□ -1.45
SHE10YGL228W NAM7P30771 971 aaKnown RBP5.99□□□□□ -1.45
SHE10YGL228W MFT1P33441 392 aaKnown RBP5.99□□□□□ -1.45
SHE10YGL228W UBP13P38187 747 aa5.99□□□□□ -1.45
SHE10YGL228W EAF5P39995 279 aa5.99□□□□□ -1.45
SHE10YGL228W LCB2P40970 561 aa5.99□□□□□ -1.45
SHE10YGL228W PSP2P50109 593 aaKnown RBP5.99□□□□□ -1.45
SHE10YGL228W COG4Q06096 861 aa5.99□□□□□ -1.45
SHE10YGL228W CUR1Q06469 252 aa5.99□□□□□ -1.45
SHE10YGL228W SMC5Q08204 1093 aa5.99□□□□□ -1.45
SHE10YGL228W FAL1Q12099 399 aaKnown RBP5.99□□□□□ -1.45
SHE10YGL228W RPL17AP05740 184 aaKnown RBP5.98□□□□□ -1.45
SHE10YGL228W RPC53P25441 422 aa5.98□□□□□ -1.45
SHE10YGL228W MNN4P36044 1178 aa5.98□□□□□ -1.45
SHE10YGL228W FYV8P46949 817 aaKnown RBP5.98□□□□□ -1.45
SHE10YGL228W RPL17BP46990 184 aaKnown RBP5.98□□□□□ -1.45
SHE10YGL228W NCS6P53088 359 aa5.98□□□□□ -1.45
SHE10YGL228W TPO2P53283 614 aa5.98□□□□□ -1.45
SHE10YGL228W RTT102P53330 157 aa5.98□□□□□ -1.45
SHE10YGL228W ICL2Q12031 575 aa5.98□□□□□ -1.45
SHE10YGL228W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
SHE10YGL228W RRP43P25359 394 aaPredicted RBP5.97□□□□□ -1.45
SHE10YGL228W EFT1P32324 842 aaKnown RBP5.97□□□□□ -1.45
SHE10YGL228W COT1P32798 439 aa5.97□□□□□ -1.45
SHE10YGL228W PCH2P38126 564 aa5.97□□□□□ -1.45
SHE10YGL228W AFG3P39925 761 aa5.97□□□□□ -1.45
SHE10YGL228W VFA1P40080 203 aa5.97□□□□□ -1.45
SHE10YGL228W PSF2P40359 213 aa5.97□□□□□ -1.45
SHE10YGL228W OSW7P43611 510 aa5.97□□□□□ -1.45
SHE10YGL228W ACF4P47129 309 aa5.97□□□□□ -1.45
SHE10YGL228W VID30P53076 958 aa5.97□□□□□ -1.45
SHE10YGL228W UME1Q03010 460 aa5.97□□□□□ -1.45
SHE10YGL228W MLH2Q07980 695 aa5.97□□□□□ -1.45
SHE10YGL228W IES4Q08561 116 aa5.97□□□□□ -1.45
SHE10YGL228W ATG9Q12142 997 aa5.97□□□□□ -1.45
SHE10YGL228W RRP6Q12149 733 aaKnown RBP5.97□□□□□ -1.45
SHE10YGL228W SSB1P11484 613 aaKnown RBP5.96□□□□□ -1.45
SHE10YGL228W TUP1P16649 713 aa5.96□□□□□ -1.45
SHE10YGL228W APL1P27351 700 aa5.96□□□□□ -1.45
SHE10YGL228W XRS2P33301 854 aa5.96□□□□□ -1.45
SHE10YGL228W YKL023WP36103 277 aaKnown RBP5.96□□□□□ -1.45
SHE10YGL228W SSB2P40150 613 aaKnown RBP5.96□□□□□ -1.45
SHE10YGL228W RRD1P40454 393 aaKnown RBP5.96□□□□□ -1.45
SHE10YGL228W SKP2P42843 763 aa5.96□□□□□ -1.45
SHE10YGL228W TAD1P53065 400 aa5.96□□□□□ -1.45
SHE10YGL228W ENV11P53246 860 aa5.96□□□□□ -1.45
SHE10YGL228W MDR1P53258 950 aa5.96□□□□□ -1.45
SHE10YGL228W YNL146WP53906 100 aa5.96□□□□□ -1.45
SHE10YGL228W CTR9P89105 1077 aa5.96□□□□□ -1.45
SHE10YGL228W YLR287CQ05881 355 aa5.96□□□□□ -1.45
SHE10YGL228W CDC53Q12018 815 aaKnown RBP5.96□□□□□ -1.45
SHE10YGL228W HMI1Q12039 706 aa5.96□□□□□ -1.45
SHE10YGL228W SUT2Q12286 268 aa5.96□□□□□ -1.45
SHE10YGL228W CHS2P14180 963 aa5.96□□□□□ -1.46
SHE10YGL228W SPO12P17123 173 aa5.96□□□□□ -1.46
SHE10YGL228W UBC1P21734 215 aaKnown RBP5.96□□□□□ -1.46
SHE10YGL228W TIM23P32897 222 aa5.96□□□□□ -1.46
SHE10YGL228W SMY2P32909 740 aaKnown RBP5.96□□□□□ -1.46
SHE10YGL228W EBP2P36049 427 aaKnown RBP5.96□□□□□ -1.46
SHE10YGL228W ATG3P40344 310 aa5.96□□□□□ -1.46
SHE10YGL228W IES1P43579 692 aa5.96□□□□□ -1.46
SHE10YGL228W YJR107WP47145 328 aa5.96□□□□□ -1.46
SHE10YGL228W DAK1P54838 584 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms