RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W SGS1P35187 1447 aa10.22□□□□□ -0.77
SHE10YGL228W MON2P48563 1636 aaPredicted RBP10.17□□□□□ -0.78
SHE10YGL228W INO80P53115 1489 aa10.08□□□□□ -0.8
SHE10YGL228W TY1B-DR4Q07793 1604 aa10.06□□□□□ -0.8
SHE10YGL228W TCB3Q03640 1545 aaKnown RBP10.05□□□□□ -0.8
SHE10YGL228W SWR1Q05471 1514 aa9.88□□□□□ -0.83
SHE10YGL228W HSL1P34244 1518 aa9.78□□□□□ -0.84
SHE10YGL228W SPT6P23615 1451 aaKnown RBP9.72□□□□□ -0.85
SHE10YGL228W SSN2P38931 1420 aa9.69□□□□□ -0.86
SHE10YGL228W SPA2P23201 1466 aaKnown RBP9.67□□□□□ -0.86
SHE10YGL228W DNA2P38859 1522 aa9.65□□□□□ -0.86
SHE10YGL228W HIR3P47171 1648 aa9.6□□□□□ -0.87
SHE10YGL228W KOG1P38873 1557 aa9.58□□□□□ -0.88
SHE10YGL228W XRN1P22147 1528 aaKnown RBP9.47□□□□□ -0.89
SHE10YGL228W REV3P14284 1504 aa9.35□□□□□ -0.91
SHE10YGL228W THO2P53552 1597 aaKnown RBP9.33□□□□□ -0.92
SHE10YGL228W DRS1P32892 752 aaKnown RBP9.31□□□□□ -0.92
SHE10YGL228W BUD4P47136 1447 aa9.29□□□□□ -0.92
SHE10YGL228W SIN3P22579 1536 aa9.28□□□□□ -0.92
SHE10YGL228W ECM5Q03214 1411 aa9.27□□□□□ -0.93
SHE10YGL228W SSK2P53599 1579 aa9.24□□□□□ -0.93
SHE10YGL228W ATG2P53855 1592 aa9.23□□□□□ -0.93
SHE10YGL228W TAF2P23255 1407 aa9.19□□□□□ -0.94
SHE10YGL228W ESP1Q03018 1630 aa9.19□□□□□ -0.94
SHE10YGL228W PEP1P32319 1579 aa9.17□□□□□ -0.94
SHE10YGL228W MDS3P53094 1487 aa9.17□□□□□ -0.94
SHE10YGL228W MYO2P19524 1574 aaKnown RBP9.08□□□□□ -0.96
SHE10YGL228W SKI3P17883 1432 aaKnown RBP9.07□□□□□ -0.96
SHE10YGL228W YPK9Q12697 1472 aa8.98□□□□□ -0.97
SHE10YGL228W SCC2Q04002 1493 aa8.94□□□□□ -0.98
SHE10YGL228W RSE1Q04693 1361 aaKnown RBP8.94□□□□□ -0.98
SHE10YGL228W TY2B-LR1P0C2J3 1770 aa8.92□□□□□ -0.98
SHE10YGL228W TY2B-FP0CX63 1770 aa8.92□□□□□ -0.98
SHE10YGL228W TY2B-GR2P0CX64 1770 aa8.92□□□□□ -0.98
SHE10YGL228W TY2B-CP25384 1770 aa8.92□□□□□ -0.98
SHE10YGL228W TY2B-DR2Q03494 1770 aa8.92□□□□□ -0.98
SHE10YGL228W TY1B-DR1Q03855 1755 aa8.92□□□□□ -0.98
SHE10YGL228W TY2B-DR3Q07791 1770 aaKnown RBP8.92□□□□□ -0.98
SHE10YGL228W TY2B-OR1Q12113 1770 aa8.92□□□□□ -0.98
SHE10YGL228W TY2B-DR1Q12472 1770 aa8.92□□□□□ -0.98
SHE10YGL228W TY2B-OR2Q12501 1770 aa8.92□□□□□ -0.98
SHE10YGL228W BPT1P14772 1559 aa8.9□□□□□ -0.99
SHE10YGL228W UFD4P33202 1483 aa8.88□□□□□ -0.99
SHE10YGL228W RPO31P04051 1460 aa8.87□□□□□ -0.99
SHE10YGL228W POL1P13382 1468 aa8.87□□□□□ -0.99
SHE10YGL228W TY1B-DR3Q99231 1755 aa8.86□□□□□ -0.99
SHE10YGL228W RKR1Q04781 1562 aa8.86□□□□□ -0.99
SHE10YGL228W TY2B-BQ12491 1770 aa8.83□□□□□ -1
SHE10YGL228W YCF1P39109 1515 aaKnown RBP8.83□□□□□ -1
SHE10YGL228W STU1P38198 1513 aa8.82□□□□□ -1
SHE10YGL228W TY1B-BRQ12193 1756 aa8.81□□□□□ -1
SHE10YGL228W TY1B-GR3Q12316 1755 aa8.81□□□□□ -1
SHE10YGL228W TY1B-ORQ92393 1755 aa8.81□□□□□ -1
SHE10YGL228W TY1B-HO13535 1793 aa8.79□□□□□ -1
SHE10YGL228W TY1B-DR5P0C2I2 1755 aa8.79□□□□□ -1
SHE10YGL228W TY1B-DR6P0C2I3 1755 aa8.79□□□□□ -1
SHE10YGL228W TY1B-LR2P0C2I5 1755 aa8.79□□□□□ -1
SHE10YGL228W TY1B-LR3P0C2I6 1755 aaKnown RBP8.79□□□□□ -1
SHE10YGL228W TY1B-PR1P0C2I9 1755 aaKnown RBP8.79□□□□□ -1
SHE10YGL228W TY1B-PR2P0C2J0 1756 aa8.79□□□□□ -1
SHE10YGL228W TY1B-PR3P0C2J1 1755 aaKnown RBP8.79□□□□□ -1
SHE10YGL228W TY1B-JR1P47098 1755 aa8.79□□□□□ -1
SHE10YGL228W TY1B-ML2Q03434 1755 aaKnown RBP8.79□□□□□ -1
SHE10YGL228W TY1B-ER1Q03612 1755 aa8.79□□□□□ -1
SHE10YGL228W TY1B-ML1Q04711 1755 aaKnown RBP8.79□□□□□ -1
SHE10YGL228W TY1B-GR2Q12269 1755 aa8.79□□□□□ -1
SHE10YGL228W TY1B-OLQ12273 1755 aa8.79□□□□□ -1
SHE10YGL228W TY1B-PLQ12414 1755 aaKnown RBP8.79□□□□□ -1
SHE10YGL228W TOP2P06786 1428 aaKnown RBP8.77□□□□□ -1.01
SHE10YGL228W YOR1P53049 1477 aa8.77□□□□□ -1.01
SHE10YGL228W CDC25P04821 1589 aa8.72□□□□□ -1.01
SHE10YGL228W ESC1Q03661 1658 aaKnown RBP8.71□□□□□ -1.02
SHE10YGL228W MTC1P47018 478 aaKnown RBP8.7□□□□□ -1.02
SHE10YGL228W SMC4Q12267 1418 aa8.69□□□□□ -1.02
SHE10YGL228W CHD1P32657 1468 aa8.66□□□□□ -1.02
SHE10YGL228W MYO4P32492 1471 aa8.63□□□□□ -1.03
SHE10YGL228W YTA7P40340 1379 aa8.63□□□□□ -1.03
SHE10YGL228W TY1B-JR2P47100 1755 aaKnown RBP8.63□□□□□ -1.03
SHE10YGL228W TY1B-ER2Q03619 1755 aa8.63□□□□□ -1.03
SHE10YGL228W TY1B-MR1Q04214 1755 aa8.63□□□□□ -1.03
SHE10YGL228W TY1B-MR2Q04670 1755 aaKnown RBP8.63□□□□□ -1.03
SHE10YGL228W TY1B-LR1Q12088 1755 aaKnown RBP8.63□□□□□ -1.03
SHE10YGL228W TY1B-NL1Q12112 1755 aa8.63□□□□□ -1.03
SHE10YGL228W TY1B-GR1Q12141 1755 aa8.63□□□□□ -1.03
SHE10YGL228W TY1B-BLQ12490 1755 aa8.63□□□□□ -1.03
SHE10YGL228W RPA190P10964 1664 aaKnown RBP8.62□□□□□ -1.03
SHE10YGL228W MMS22Q06164 1454 aa8.62□□□□□ -1.03
SHE10YGL228W PAN1P32521 1480 aa8.61□□□□□ -1.03
SHE10YGL228W DNF1P32660 1571 aa8.61□□□□□ -1.03
SHE10YGL228W RQC2Q12532 1038 aaKnown RBP8.6□□□□□ -1.03
SHE10YGL228W SPP41P38904 1435 aa8.58□□□□□ -1.04
SHE10YGL228W MLP2P40457 1679 aa8.57□□□□□ -1.04
SHE10YGL228W VTH1P40438 1549 aa8.55□□□□□ -1.04
SHE10YGL228W VTH2P40890 1549 aa8.55□□□□□ -1.04
SHE10YGL228W NTE1Q04958 1679 aa8.54□□□□□ -1.04
SHE10YGL228W SNQ2P32568 1501 aaKnown RBP8.52□□□□□ -1.05
SHE10YGL228W RPO21P04050 1733 aaKnown RBP8.51□□□□□ -1.05
SHE10YGL228W TSC11P40061 1430 aa8.51□□□□□ -1.05
SHE10YGL228W ULS1Q08562 1619 aa8.5□□□□□ -1.05
SHE10YGL228W TRM732Q03496 1420 aa8.47□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms