RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W TSL1P38427 1098 aaKnown RBP4.69□□□□□ -1.66
LOC1YFR001W MEF2P39677 819 aa4.69□□□□□ -1.66
LOC1YFR001W TAF1P46677 1066 aa4.69□□□□□ -1.66
LOC1YFR001W SFB2P53953 876 aa4.69□□□□□ -1.66
LOC1YFR001W BUL2Q03758 920 aaKnown RBP4.69□□□□□ -1.66
LOC1YFR001W SCT1P32784 759 aa4.68□□□□□ -1.66
LOC1YFR001W HUL4P40985 892 aa4.68□□□□□ -1.66
LOC1YFR001W TAF8Q03750 510 aa4.68□□□□□ -1.66
LOC1YFR001W YDR132CQ03900 495 aa4.68□□□□□ -1.66
LOC1YFR001W LCD1Q04377 747 aa4.68□□□□□ -1.66
LOC1YFR001W DUS4Q06063 367 aa4.68□□□□□ -1.66
LOC1YFR001W YPL277CQ08989 487 aa4.68□□□□□ -1.66
LOC1YFR001W YPR071WQ12346 211 aa4.68□□□□□ -1.66
LOC1YFR001W YOR131CQ12486 218 aa4.68□□□□□ -1.66
LOC1YFR001W SOD2P00447 233 aa4.67□□□□□ -1.66
LOC1YFR001W RPS13P05756 151 aaKnown RBP4.67□□□□□ -1.66
LOC1YFR001W RPC82P32349 654 aa4.67□□□□□ -1.66
LOC1YFR001W YKL091CP33324 310 aaKnown RBP4.67□□□□□ -1.66
LOC1YFR001W ERT1P38140 529 aa4.67□□□□□ -1.66
LOC1YFR001W YBR238CP38330 731 aaKnown RBP4.67□□□□□ -1.66
LOC1YFR001W ZRG8P40021 1076 aa4.67□□□□□ -1.66
LOC1YFR001W YER158CP40095 573 aa4.67□□□□□ -1.66
LOC1YFR001W TOK1P40310 691 aa4.67□□□□□ -1.66
LOC1YFR001W YKE2P52553 114 aa4.67□□□□□ -1.66
LOC1YFR001W RIM8P53179 542 aa4.67□□□□□ -1.66
LOC1YFR001W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
LOC1YFR001W GCN5Q03330 439 aa4.67□□□□□ -1.66
LOC1YFR001W RPN4Q03465 531 aa4.67□□□□□ -1.66
LOC1YFR001W CAN1P04817 590 aa4.66□□□□□ -1.66
LOC1YFR001W TOP3P13099 656 aa4.66□□□□□ -1.66
LOC1YFR001W CDC48P25694 835 aaKnown RBP4.66□□□□□ -1.66
LOC1YFR001W YKL222CP35995 705 aa4.66□□□□□ -1.66
LOC1YFR001W PET10P36139 283 aa4.66□□□□□ -1.66
LOC1YFR001W FLR1P38124 548 aa4.66□□□□□ -1.66
LOC1YFR001W GGA2P38817 585 aaKnown RBP4.66□□□□□ -1.66
LOC1YFR001W MND2P40577 368 aa4.66□□□□□ -1.66
LOC1YFR001W CCM1P48237 864 aaPredicted RBP4.66□□□□□ -1.66
LOC1YFR001W RTA1P53047 317 aa4.66□□□□□ -1.66
LOC1YFR001W PBP1P53297 722 aaKnown RBP4.66□□□□□ -1.66
LOC1YFR001W YPR196WQ06595 470 aa4.66□□□□□ -1.66
LOC1YFR001W YDL124WQ07551 312 aaKnown RBP4.66□□□□□ -1.66
LOC1YFR001W PPM2Q08282 695 aa4.66□□□□□ -1.66
LOC1YFR001W YTA7P40340 1379 aa4.65□□□□□ -1.66
LOC1YFR001W CDC6P09119 513 aa4.65□□□□□ -1.67
LOC1YFR001W ENA1P13587 1091 aa4.65□□□□□ -1.67
LOC1YFR001W MSD1P15179 658 aaKnown RBP4.65□□□□□ -1.67
LOC1YFR001W GAL11P19659 1081 aa4.65□□□□□ -1.67
LOC1YFR001W SRP101P32916 621 aa4.65□□□□□ -1.67
LOC1YFR001W DOM34P33309 386 aa4.65□□□□□ -1.67
LOC1YFR001W REC104P33323 182 aa4.65□□□□□ -1.67
LOC1YFR001W BET3P36149 193 aa4.65□□□□□ -1.67
LOC1YFR001W GIP4P39732 760 aa4.65□□□□□ -1.67
LOC1YFR001W YGR012WP53206 393 aa4.65□□□□□ -1.67
LOC1YFR001W GTF1P53260 183 aaPredicted RBP4.65□□□□□ -1.67
LOC1YFR001W ENA2Q01896 1091 aa4.65□□□□□ -1.67
LOC1YFR001W CDA1Q06702 301 aa4.65□□□□□ -1.67
LOC1YFR001W TPO1Q07824 586 aa4.65□□□□□ -1.67
LOC1YFR001W GPB1Q08886 897 aa4.65□□□□□ -1.67
LOC1YFR001W ENA5Q12691 1091 aa4.65□□□□□ -1.67
LOC1YFR001W HSF1P10961 833 aa4.64□□□□□ -1.67
LOC1YFR001W TOD6P34219 525 aa4.64□□□□□ -1.67
LOC1YFR001W PBP2P38151 413 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
LOC1YFR001W CHZ1P40019 153 aaPredicted RBP4.64□□□□□ -1.67
LOC1YFR001W BUD6P41697 788 aa4.64□□□□□ -1.67
LOC1YFR001W GCV2P49095 1034 aa4.64□□□□□ -1.67
LOC1YFR001W SPT20P50875 604 aa4.64□□□□□ -1.67
LOC1YFR001W POA1P38218 177 aa4.63□□□□□ -1.67
LOC1YFR001W UBP6P43593 499 aaKnown RBP4.63□□□□□ -1.67
LOC1YFR001W VPS62P53285 467 aa4.63□□□□□ -1.67
LOC1YFR001W RXT3Q07458 294 aa4.63□□□□□ -1.67
LOC1YFR001W ACK1Q07622 623 aaPredicted RBP4.63□□□□□ -1.67
LOC1YFR001W ADY3Q07732 790 aa4.63□□□□□ -1.67
LOC1YFR001W NOT3P06102 836 aaKnown RBP4.62□□□□□ -1.67
LOC1YFR001W EMC1P25574 760 aa4.62□□□□□ -1.67
LOC1YFR001W CDC20P26309 610 aa4.62□□□□□ -1.67
LOC1YFR001W HMI1Q12039 706 aa4.62□□□□□ -1.67
LOC1YFR001W TOM70P07213 617 aaKnown RBP4.61□□□□□ -1.67
LOC1YFR001W SPE1P08432 466 aa4.61□□□□□ -1.67
LOC1YFR001W CIT2P08679 460 aa4.61□□□□□ -1.67
LOC1YFR001W PRE10P21242 288 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
LOC1YFR001W MET12P46151 657 aa4.61□□□□□ -1.67
LOC1YFR001W PSP2P50109 593 aaKnown RBP4.61□□□□□ -1.67
LOC1YFR001W RAI1P53063 387 aaKnown RBP4.61□□□□□ -1.67
LOC1YFR001W GIS1Q03833 894 aa4.61□□□□□ -1.67
LOC1YFR001W ENV7Q12003 364 aa4.61□□□□□ -1.67
LOC1YFR001W ERR1P0CX10 437 aa4.6□□□□□ -1.67
LOC1YFR001W ERR2P0CX11 437 aa4.6□□□□□ -1.67
LOC1YFR001W TIM23P32897 222 aa4.6□□□□□ -1.67
LOC1YFR001W NUP82P40368 713 aa4.6□□□□□ -1.67
LOC1YFR001W CHA4P43634 648 aa4.6□□□□□ -1.67
LOC1YFR001W FPR4Q06205 392 aaPredicted RBP4.6□□□□□ -1.67
LOC1YFR001W YLR358CO13565 187 aa4.59□□□□□ -1.67
LOC1YFR001W HIS5P07172 385 aa4.59□□□□□ -1.67
LOC1YFR001W RFA1P22336 621 aaKnown RBP4.59□□□□□ -1.67
LOC1YFR001W STE13P33894 931 aa4.59□□□□□ -1.67
LOC1YFR001W ORC1P54784 914 aaPredicted RBP4.59□□□□□ -1.67
LOC1YFR001W YAP6Q03935 383 aa4.59□□□□□ -1.67
LOC1YFR001W YLR224WQ05947 369 aa4.59□□□□□ -1.67
LOC1YFR001W NOP12Q08208 459 aaKnown RBP4.59□□□□□ -1.67
LOC1YFR001W RPP2AP05319 106 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms