RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	YDR337W	OSW7	P43611	510 aa		7.39	□□□□□ -1.23
MRPS28	YDR337W	VPS53	P47061	822 aa		7.39	□□□□□ -1.23
MRPS28	YDR337W	CCM1	P48237	864 aa	Predicted RBP	7.39	□□□□□ -1.23
MRPS28	YDR337W	YMR321C	Q04898	105 aa		7.39	□□□□□ -1.23
MRPS28	YDR337W	COG4	Q06096	861 aa		7.39	□□□□□ -1.23
MRPS28	YDR337W	NOC3	Q07896	663 aa	Predicted RBP	7.39	□□□□□ -1.23
MRPS28	YDR337W	TCO89	Q08921	799 aa		7.39	□□□□□ -1.23
MRPS28	YDR337W	CWC2	Q12046	339 aa	Predicted RBP	7.39	□□□□□ -1.23
MRPS28	YDR337W	MED1	Q12321	566 aa		7.39	□□□□□ -1.23
MRPS28	YDR337W	PCK1	P10963	549 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	TCP1	P12612	559 aa	Known RBP	7.38	□□□□□ -1.23
MRPS28	YDR337W	SPO11	P23179	398 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	RPC53	P25441	422 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	PCH2	P38126	564 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	ERC1	P38767	581 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	UBP5	P39944	805 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	ATG1	P53104	897 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	YCG1	Q06680	1035 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	YOR238W	Q08634	303 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	RRP6	Q12149	733 aa	Known RBP	7.38	□□□□□ -1.23
MRPS28	YDR337W	TRM11	Q12463	433 aa		7.38	□□□□□ -1.23
MRPS28	YDR337W	DED1	P06634	604 aa	Known RBP	7.37	□□□□□ -1.23
MRPS28	YDR337W	MAK16	P10962	306 aa	Predicted RBP	7.37	□□□□□ -1.23
MRPS28	YDR337W	RRP43	P25359	394 aa	Predicted RBP	7.37	□□□□□ -1.23
MRPS28	YDR337W	YUR1	P26725	428 aa		7.37	□□□□□ -1.23
MRPS28	YDR337W	SPC110	P32380	944 aa		7.37	□□□□□ -1.23
MRPS28	YDR337W	YEL025C	P39991	1188 aa		7.37	□□□□□ -1.23
MRPS28	YDR337W	RPS7B	P48164	190 aa	Known RBP	7.37	□□□□□ -1.23
MRPS28	YDR337W	VID30	P53076	958 aa		7.37	□□□□□ -1.23
MRPS28	YDR337W	GIR2	Q03768	265 aa	Predicted RBP	7.37	□□□□□ -1.23
MRPS28	YDR337W	YLR287C	Q05881	355 aa		7.37	□□□□□ -1.23
MRPS28	YDR337W	ESC2	Q06340	456 aa		7.37	□□□□□ -1.23
MRPS28	YDR337W	GPI13	Q07830	1017 aa		7.37	□□□□□ -1.23
MRPS28	YDR337W	YLL058W	Q12198	575 aa		7.37	□□□□□ -1.23
MRPS28	YDR337W	TIF6	Q12522	245 aa	Known RBP	7.37	□□□□□ -1.23
MRPS28	YDR337W	GSC2	P40989	1895 aa		7.36	□□□□□ -1.23
MRPS28	YDR337W	NAM7	P30771	971 aa	Known RBP	7.36	□□□□□ -1.23
MRPS28	YDR337W	EFM2	P38347	419 aa		7.36	□□□□□ -1.23
MRPS28	YDR337W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
MRPS28	YDR337W	HFM1	P51979	1187 aa		7.36	□□□□□ -1.23
MRPS28	YDR337W	SCS3	P53012	380 aa		7.36	□□□□□ -1.23
MRPS28	YDR337W	UME1	Q03010	460 aa		7.36	□□□□□ -1.23
MRPS28	YDR337W	SPP1	Q03012	353 aa		7.36	□□□□□ -1.23
MRPS28	YDR337W	YLR225C	Q05948	407 aa	Known RBP	7.36	□□□□□ -1.23
MRPS28	YDR337W	SMC5	Q08204	1093 aa		7.36	□□□□□ -1.23
MRPS28	YDR337W	SSB1	P11484	613 aa	Known RBP	7.35	□□□□□ -1.23
MRPS28	YDR337W	PHO8	P11491	566 aa		7.35	□□□□□ -1.23
MRPS28	YDR337W	SPO12	P17123	173 aa		7.35	□□□□□ -1.23
MRPS28	YDR337W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7.35	□□□□□ -1.23	not detected
MRPS28	YDR337W	APL1	P27351	700 aa		7.35	□□□□□ -1.23
MRPS28	YDR337W	COT1	P32798	439 aa		7.35	□□□□□ -1.23
MRPS28	YDR337W	ETP1	P38748	585 aa	Known RBP	7.35	□□□□□ -1.23
MRPS28	YDR337W	SSB2	P40150	613 aa	Known RBP	7.35	□□□□□ -1.23
MRPS28	YDR337W	STU2	P46675	888 aa		7.35	□□□□□ -1.23
MRPS28	YDR337W	AVT1	P47082	602 aa		7.35	□□□□□ -1.23
MRPS28	YDR337W	ROD1	Q02805	837 aa		7.35	□□□□□ -1.23
MRPS28	YDR337W	PLP2	Q12017	286 aa		7.35	□□□□□ -1.23
MRPS28	YDR337W	FAL1	Q12099	399 aa	Known RBP	7.35	□□□□□ -1.23
MRPS28	YDR337W	SWI6	P09959	803 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	CHS2	P14180	963 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.34	□□□□□ -1.23	not detected
MRPS28	YDR337W	PDC6	P26263	563 aa	Known RBP	7.34	□□□□□ -1.23
MRPS28	YDR337W	YSC83	P32792	385 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	RGT1	P32862	1170 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	SMC1	P32908	1225 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	VPS35	P34110	944 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	YKL023W	P36103	277 aa	Known RBP	7.34	□□□□□ -1.23
MRPS28	YDR337W	EAF5	P39995	279 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	MXR1	P40029	184 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	VFA1	P40080	203 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	YAP5	P40574	245 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	LCB2	P40970	561 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	PSP2	P50109	593 aa	Known RBP	7.34	□□□□□ -1.23
MRPS28	YDR337W	TAM41	P53230	385 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	CAF130	P53280	1122 aa	Predicted RBP	7.34	□□□□□ -1.23
MRPS28	YDR337W	RTT102	P53330	157 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	VPS38	Q05919	439 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	CUR1	Q06469	252 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	MLH2	Q07980	695 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	MET7	Q08645	548 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	HMI1	Q12039	706 aa		7.34	□□□□□ -1.23
MRPS28	YDR337W	PPR1	P07272	904 aa	Predicted RBP	7.33	□□□□□ -1.24
MRPS28	YDR337W	MAS2	P11914	482 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	IRE1	P32361	1115 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	XRS2	P33301	854 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	NIP100	P33420	868 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	ACF4	P47129	309 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	MDR1	P53258	950 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	YDR090C	Q03193	310 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	UTP14	Q04500	899 aa	Known RBP	7.33	□□□□□ -1.24
MRPS28	YDR337W	COQ9	Q05779	260 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	OSW2	Q12202	724 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	YOL098C	Q12496	1037 aa		7.33	□□□□□ -1.24
MRPS28	YDR337W	POX1	P13711	748 aa		7.32	□□□□□ -1.24
MRPS28	YDR337W	UBC1	P21734	215 aa	Known RBP	7.32	□□□□□ -1.24
MRPS28	YDR337W	MNN4	P36044	1178 aa		7.32	□□□□□ -1.24
MRPS28	YDR337W	FLR1	P38124	548 aa		7.32	□□□□□ -1.24
MRPS28	YDR337W	ATG3	P40344	310 aa		7.32	□□□□□ -1.24
MRPS28	YDR337W	IES1	P43579	692 aa		7.32	□□□□□ -1.24
MRPS28	YDR337W	TIM8	P57744	87 aa		7.32	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms