RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	MET12	P46151	657 aa		6.59	□□□□□ -1.35
SLX1	YBR228W	SRT1	Q03175	343 aa		6.59	□□□□□ -1.35
SLX1	YBR228W	PRI2	P20457	528 aa		6.58	□□□□□ -1.36
SLX1	YBR228W	NAP1	P25293	417 aa	Known RBP	6.58	□□□□□ -1.36
SLX1	YBR228W	CCC2	P38995	1004 aa		6.58	□□□□□ -1.36
SLX1	YBR228W	MSE1	P48525	536 aa		6.58	□□□□□ -1.36
SLX1	YBR228W	ADY3	Q07732	790 aa		6.58	□□□□□ -1.36
SLX1	YBR228W	YLL058W	Q12198	575 aa		6.58	□□□□□ -1.36
SLX1	YBR228W	NTO1	Q12311	748 aa		6.58	□□□□□ -1.36
SLX1	YBR228W	HIS5	P07172	385 aa		6.57	□□□□□ -1.36
SLX1	YBR228W	GIC1	P38785	314 aa		6.57	□□□□□ -1.36
SLX1	YBR228W	PSP2	P50109	593 aa	Known RBP	6.57	□□□□□ -1.36
SLX1	YBR228W	SRP1	Q02821	542 aa	Known RBP	6.57	□□□□□ -1.36
SLX1	YBR228W	VPS16	Q03308	798 aa		6.57	□□□□□ -1.36
SLX1	YBR228W	DUS3	Q06053	668 aa	Known RBP	6.57	□□□□□ -1.36
SLX1	YBR228W	SCC2	Q04002	1493 aa		6.56	□□□□□ -1.36
SLX1	YBR228W	RPP2A	P05319	106 aa	Known RBP	6.56	□□□□□ -1.36
SLX1	YBR228W	SPE1	P08432	466 aa		6.56	□□□□□ -1.36
SLX1	YBR228W	SBA1	P28707	216 aa	Known RBP	6.56	□□□□□ -1.36
SLX1	YBR228W	FUN30	P31380	1131 aa		6.56	□□□□□ -1.36
SLX1	YBR228W	ECM21	P38167	1117 aa	Known RBP	6.56	□□□□□ -1.36
SLX1	YBR228W	CDA1	Q06702	301 aa		6.56	□□□□□ -1.36
SLX1	YBR228W	PIN2	Q12057	282 aa		6.56	□□□□□ -1.36
SLX1	YBR228W	PUS9	Q12069	462 aa		6.56	□□□□□ -1.36
SLX1	YBR228W	BPT1	P14772	1559 aa		6.56	□□□□□ -1.36
SLX1	YBR228W	AIM21	P40563	679 aa		6.55	□□□□□ -1.36
SLX1	YBR228W	YPR196W	Q06595	470 aa		6.55	□□□□□ -1.36
SLX1	YBR228W	HSF1	P10961	833 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	AGP1	P25376	633 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	PMI40	P29952	429 aa	Known RBP	6.54	□□□□□ -1.36
SLX1	YBR228W	SUN4	P53616	420 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-LR1	P0C2J3	1770 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-F	P0CX63	1770 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-GR2	P0CX64	1770 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-C	P25384	1770 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-DR2	Q03494	1770 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY1B-DR1	Q03855	1755 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-DR3	Q07791	1770 aa	Known RBP	6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-OR1	Q12113	1770 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-DR1	Q12472	1770 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	TY2B-OR2	Q12501	1770 aa		6.54	□□□□□ -1.36
SLX1	YBR228W	SFB2	P53953	876 aa		6.53	□□□□□ -1.36
SLX1	YBR228W	OPI10	Q08202	246 aa		6.53	□□□□□ -1.36
SLX1	YBR228W	PMA1	P05030	918 aa	Known RBP	6.52	□□□□□ -1.37
SLX1	YBR228W	PPH3	P32345	308 aa		6.52	□□□□□ -1.37
SLX1	YBR228W	DCG1	P32460	244 aa		6.52	□□□□□ -1.37
SLX1	YBR228W	CDC12	P32468	407 aa	Known RBP	6.52	□□□□□ -1.37
SLX1	YBR228W	YKL069W	P36088	180 aa		6.52	□□□□□ -1.37
SLX1	YBR228W	VBA5	P36172	582 aa		6.52	□□□□□ -1.37
SLX1	YBR228W	NPP2	P39997	493 aa		6.52	□□□□□ -1.37
SLX1	YBR228W	SVF1	Q05515	481 aa		6.52	□□□□□ -1.37
SLX1	YBR228W	YDR306C	Q06640	478 aa		6.52	□□□□□ -1.37
SLX1	YBR228W	UFD4	P33202	1483 aa		6.52	□□□□□ -1.37
SLX1	YBR228W	IOC3	P43596	787 aa		6.51	□□□□□ -1.37
SLX1	YBR228W	URN1	Q06525	465 aa	Known RBP	6.51	□□□□□ -1.37
SLX1	YBR228W	KCS1	Q12494	1050 aa		6.51	□□□□□ -1.37
SLX1	YBR228W	RPO31	P04051	1460 aa		6.51	□□□□□ -1.37
SLX1	YBR228W	VAC8	P39968	578 aa		6.5	□□□□□ -1.37
SLX1	YBR228W	CHA4	P43634	648 aa		6.5	□□□□□ -1.37
SLX1	YBR228W	NPC2	Q12408	173 aa		6.5	□□□□□ -1.37
SLX1	YBR228W	POL1	P13382	1468 aa		6.49	□□□□□ -1.37
SLX1	YBR228W	PFK1	P16861	987 aa	Known RBP	6.49	□□□□□ -1.37
SLX1	YBR228W	YER158C	P40095	573 aa		6.49	□□□□□ -1.37
SLX1	YBR228W	WHI4	Q07655	649 aa	Known RBP	6.49	□□□□□ -1.37
SLX1	YBR228W	RKR1	Q04781	1562 aa		6.48	□□□□□ -1.37
SLX1	YBR228W	MSS4	P38994	779 aa		6.48	□□□□□ -1.37
SLX1	YBR228W	KIN4	Q01919	800 aa		6.48	□□□□□ -1.37
SLX1	YBR228W	SHE9	Q04172	456 aa		6.48	□□□□□ -1.37
SLX1	YBR228W	TY1B-DR3	Q99231	1755 aa		6.48	□□□□□ -1.37
SLX1	YBR228W	TY2B-B	Q12491	1770 aa		6.47	□□□□□ -1.37
SLX1	YBR228W	YCF1	P39109	1515 aa	Known RBP	6.47	□□□□□ -1.37
SLX1	YBR228W	AAR2	P32357	355 aa	Predicted RBP	6.47	□□□□□ -1.37
SLX1	YBR228W	DEF1	P35732	738 aa	Known RBP	6.47	□□□□□ -1.37
SLX1	YBR228W	EXG2	P52911	562 aa		6.47	□□□□□ -1.37
SLX1	YBR228W	ALD6	P54115	500 aa	Known RBP	6.47	□□□□□ -1.37
SLX1	YBR228W	TY1B-BR	Q12193	1756 aa		6.46	□□□□□ -1.37
SLX1	YBR228W	TY1B-GR3	Q12316	1755 aa		6.46	□□□□□ -1.37
SLX1	YBR228W	TY1B-OR	Q92393	1755 aa		6.46	□□□□□ -1.37
SLX1	YBR228W	CAD1	P24813	409 aa	Known RBP	6.46	□□□□□ -1.38
SLX1	YBR228W	ATG19	P35193	415 aa		6.46	□□□□□ -1.38
SLX1	YBR228W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.46	□□□□□ -1.38	not detected
SLX1	YBR228W	AIM39	Q08223	395 aa		6.46	□□□□□ -1.38
SLX1	YBR228W	STU1	P38198	1513 aa		6.45	□□□□□ -1.38
SLX1	YBR228W	GYP7	P48365	746 aa		6.45	□□□□□ -1.38
SLX1	YBR228W	SLI1	P53304	468 aa		6.45	□□□□□ -1.38
SLX1	YBR228W	TOP2	P06786	1428 aa	Known RBP	6.44	□□□□□ -1.38
SLX1	YBR228W	HRR25	P29295	494 aa	Known RBP	6.44	□□□□□ -1.38
SLX1	YBR228W	RPC82	P32349	654 aa		6.44	□□□□□ -1.38
SLX1	YBR228W	SNU71	P53207	620 aa	Known RBP	6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-H	O13535	1793 aa		6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-DR5	P0C2I2	1755 aa		6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-DR6	P0C2I3	1755 aa		6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-LR2	P0C2I5	1755 aa		6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-PR2	P0C2J0	1756 aa		6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-JR1	P47098	1755 aa		6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-ML2	Q03434	1755 aa	Known RBP	6.44	□□□□□ -1.38
SLX1	YBR228W	TY1B-ER1	Q03612	1755 aa		6.44	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms