RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Atg4a-psA0A0G2JFS9 396 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Prkar2bP31324 416 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Plcb3P51432 1234 aaKnown RBP6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Drc7Q6V3W6 876 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Pwp2Q8BU03 919 aaKnown RBP6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Atg4aQ8C9S8 396 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ppp2r3dQ9Z176 491 aa6.68□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Dnai2A2AC93 623 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Tnnt1O88346 262 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Trim25Q61510 634 aaKnown RBP6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Gdap1l1Q8VE33 370 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Krt85Q9Z2T6 507 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 PaskQ8CEE6 1383 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 AW822073A0A0N4SUK1 652 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Cfdp1O88271 295 aaKnown RBP6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Syt1P46096 421 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Acbd5Q5XG73 508 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 R3hcc1Q8BSI6 488 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Saal1Q9D2C2 474 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 SetQ9EQU5 289 aaKnown RBP6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ap3b2Q9JME5 1082 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Sh3bp5Q9Z131 463 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Pik3r4Q8VD65 1358 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Smarcc2Q6PDG5 1213 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Smc1bQ920F6 1248 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ccdc7Q9D541 371 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 PdiltQ9DAN1 588 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Zfyve16Q80U44 1528 aa6.67□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Adamts13Q769J6 1426 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 A0A1L1SQF0 893 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ccdc121E9Q6D3 323 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Ccdc38Q8CDN8 563 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Bmp2kQ91Z96 1138 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 MicalclQ9D5U9 680 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Q9D9S1 216 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Atp1a4Q9WV27 1032 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Neurl4Q5NCX5 1563 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Abcc3B2RX12 1523 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Gm3409A0A0G2JE67 319 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Adcy2Q80TL1 1090 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Dydc1Q9D9T0 175 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Gm32742A0A1B0GT42 1604 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 AU022751B1B0V2 589 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Klra1P20937 262 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Tm6sf1P58749 370 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Puf60Q3UEB3 564 aaKnown RBP6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 ChmQ9QXG2 665 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Nphp1Q9QY53 687 aa6.66□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Hmx1O70218 332 aa6.65□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 MpripP97434 1024 aa6.65□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Efcab8Q8C9R9 203 aa6.65□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Aldh1l2Q8K009 923 aa6.65□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 Nsd2Q8BVE8 1365 aa6.65□□□□□ -1.34
Rc3h1-201ENSMUST00000035911 F2rP30558 430 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Irx1P81068 480 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Znhit6Q3UFB2 460 aaKnown RBP6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Panx2Q6IMP4 677 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Ccdc57Q6PHN1 1016 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 LarsQ8BMJ2 1178 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 DpydQ8CHR6 1025 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Kcnk13Q8R1P5 405 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Zkscan3Q91VW9 553 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Mis12Q9CY25 206 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Tubb4aQ9D6F9 444 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Osbpl5Q9ER64 874 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 PalmQ9Z0P4 383 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Zfp804bA0A0G2JGH6 1343 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Uggt2E9Q4X2 1504 aa6.65□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Pibf1E9Q6K3 756 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Mcm5P49718 733 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Psen1P49769 467 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Atp6v1aP50516 617 aaKnown RBP6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Anks1aP59672 1150 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Ccdc114Q3UX62 658 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Spata16Q8C636 571 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Smc2Q8CG48 1191 aaKnown RBP6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Iffo2Q8R2V2 512 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Hnrnpul1Q8VDM6 859 aaKnown RBP6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Q8VDP2 222 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Ttc37F8VPK0 1563 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Tulp4Q9JIL5 1547 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Adgrl2Q8JZZ7 1487 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Edc4Q3UJB9 1406 aaKnown RBP6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 InsrP15208 1372 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Stx1aO35526 288 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 RargP18911 458 aaKnown RBP6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Fchsd2Q3USJ8 740 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Hspa4Q61316 841 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Srgap3Q812A2 1099 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Ppp1r18Q8BQ30 594 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Etf1Q8BWY3 437 aaKnown RBP6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Brms1Q99N20 246 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Rufy3Q9D394 469 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Zranb2Q9R020 330 aaKnown RBP6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Exoc8Q6PGF7 716 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Ppp6r1Q7TSI3 856 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Synpo2Q91YE8 1087 aaKnown RBP6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Cep89Q9CZX2 791 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 Lemd3Q9WU40 921 aa6.64□□□□□ -1.35
Rc3h1-201ENSMUST00000035911 AglF8VPN4 1532 aa6.64□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms