Protein–RNA interactions for Protein: Q8R2V2

Iffo2, Intermediate filament family orphan 2, mousemouse

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Iffo2Q8R2V2 Gm25239-201ENSMUST00000174915 86 ntBASIC42.74■■■■■ 4.43
Iffo2Q8R2V2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
Iffo2Q8R2V2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
Iffo2Q8R2V2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
Iffo2Q8R2V2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
Iffo2Q8R2V2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.86■■■■□ 3.81
Iffo2Q8R2V2 Gm24109-201ENSMUST00000175489 103 ntBASIC37.94■■■■□ 3.66
Iffo2Q8R2V2 Gm15042-201ENSMUST00000120212 883 ntBASIC37.78■■■■□ 3.64
Iffo2Q8R2V2 Psd-208ENSMUST00000224556 2034 ntBASIC37.42■■■■□ 3.58
Iffo2Q8R2V2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Iffo2Q8R2V2 Gm15045-201ENSMUST00000117359 883 ntBASIC37.02■■■■□ 3.52
Iffo2Q8R2V2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
Iffo2Q8R2V2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
Iffo2Q8R2V2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.54■■■■□ 3.44
Iffo2Q8R2V2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
Iffo2Q8R2V2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Iffo2Q8R2V2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.23■■■■□ 3.39
Iffo2Q8R2V2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Iffo2Q8R2V2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Iffo2Q8R2V2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Iffo2Q8R2V2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Iffo2Q8R2V2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Iffo2Q8R2V2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.88■■■■□ 3.33
Iffo2Q8R2V2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.84■■■■□ 3.33
Iffo2Q8R2V2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Iffo2Q8R2V2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
Iffo2Q8R2V2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Iffo2Q8R2V2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
Iffo2Q8R2V2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
Iffo2Q8R2V2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.7■■■■□ 3.31
Iffo2Q8R2V2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Iffo2Q8R2V2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
Iffo2Q8R2V2 Gm23366-201ENSMUST00000175022 89 ntBASIC35.56■■■■□ 3.28
Iffo2Q8R2V2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.51■■■■□ 3.28
Iffo2Q8R2V2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Iffo2Q8R2V2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
Iffo2Q8R2V2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Iffo2Q8R2V2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.21■■■■□ 3.23
Iffo2Q8R2V2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Iffo2Q8R2V2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.11■■■■□ 3.21
Iffo2Q8R2V2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
Iffo2Q8R2V2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Iffo2Q8R2V2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Iffo2Q8R2V2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
Iffo2Q8R2V2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Iffo2Q8R2V2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Iffo2Q8R2V2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.57■■■■□ 3.13
Iffo2Q8R2V2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.54■■■■□ 3.12
Iffo2Q8R2V2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Iffo2Q8R2V2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.41■■■■□ 3.1
Iffo2Q8R2V2 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.34■■■■□ 3.09
Iffo2Q8R2V2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Iffo2Q8R2V2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Iffo2Q8R2V2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Iffo2Q8R2V2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.23■■■■□ 3.07
Iffo2Q8R2V2 Gm25238-201ENSMUST00000174914 89 ntBASIC34.21■■■■□ 3.07
Iffo2Q8R2V2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.2■■■■□ 3.06
Iffo2Q8R2V2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Iffo2Q8R2V2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Iffo2Q8R2V2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
Iffo2Q8R2V2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Iffo2Q8R2V2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Iffo2Q8R2V2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.71■■■□□ 2.99
Iffo2Q8R2V2 Gm25262-201ENSMUST00000174934 133 ntBASIC33.7■■■□□ 2.99
Iffo2Q8R2V2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Iffo2Q8R2V2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Iffo2Q8R2V2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.61■■■□□ 2.97
Iffo2Q8R2V2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.58■■■□□ 2.97
Iffo2Q8R2V2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Iffo2Q8R2V2 Gm26115-201ENSMUST00000175605 87 ntBASIC33.54■■■□□ 2.96
Iffo2Q8R2V2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.49■■■□□ 2.95
Iffo2Q8R2V2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.49■■■□□ 2.95
Iffo2Q8R2V2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Iffo2Q8R2V2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Iffo2Q8R2V2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.43■■■□□ 2.94
Iffo2Q8R2V2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.42■■■□□ 2.94
Iffo2Q8R2V2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.41■■■□□ 2.94
Iffo2Q8R2V2 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.41■■■□□ 2.94
Iffo2Q8R2V2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.39■■■□□ 2.94
Iffo2Q8R2V2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.33■■■□□ 2.93
Iffo2Q8R2V2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.28■■■□□ 2.92
Iffo2Q8R2V2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
Iffo2Q8R2V2 Gm27325-201ENSMUST00000175467 74 ntBASIC33.22■■■□□ 2.91
Iffo2Q8R2V2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Iffo2Q8R2V2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Iffo2Q8R2V2 Gm8109-201ENSMUST00000194076 746 ntBASIC33.03■■■□□ 2.88
Iffo2Q8R2V2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Iffo2Q8R2V2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
Iffo2Q8R2V2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
Iffo2Q8R2V2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.99■■■□□ 2.87
Iffo2Q8R2V2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Iffo2Q8R2V2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Iffo2Q8R2V2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.94■■■□□ 2.86
Iffo2Q8R2V2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Iffo2Q8R2V2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
Iffo2Q8R2V2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Iffo2Q8R2V2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Iffo2Q8R2V2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Iffo2Q8R2V2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Iffo2Q8R2V2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms