Protein–RNA interactions for Protein: Q8BSI6

R3hcc1, R3H and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1Q8BSI6 Gm25239-201ENSMUST00000174915 86 ntBASIC40,9■■■■■ 4,14
R3hcc1Q8BSI6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39,97■■■■□ 3,99
R3hcc1Q8BSI6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38,73■■■■□ 3,79
R3hcc1Q8BSI6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38,61■■■■□ 3,77
R3hcc1Q8BSI6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37,37■■■■□ 3,57
R3hcc1Q8BSI6 Psd-208ENSMUST00000224556 2034 ntBASIC37,27■■■■□ 3,56
R3hcc1Q8BSI6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,02■■■■□ 3,52
R3hcc1Q8BSI6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36,95■■■■□ 3,51
R3hcc1Q8BSI6 Gm15042-201ENSMUST00000120212 883 ntBASIC36,7■■■■□ 3,47
R3hcc1Q8BSI6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36,44■■■■□ 3,42
R3hcc1Q8BSI6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36,19■■■■□ 3,38
R3hcc1Q8BSI6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36,13■■■■□ 3,37
R3hcc1Q8BSI6 Gm15045-201ENSMUST00000117359 883 ntBASIC35,99■■■■□ 3,35
R3hcc1Q8BSI6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35,95■■■■□ 3,35
R3hcc1Q8BSI6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35,9■■■■□ 3,34
R3hcc1Q8BSI6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35,75■■■■□ 3,31
R3hcc1Q8BSI6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35,68■■■■□ 3,3
R3hcc1Q8BSI6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35,63■■■■□ 3,29
R3hcc1Q8BSI6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35,42■■■■□ 3,26
R3hcc1Q8BSI6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35,25■■■■□ 3,23
R3hcc1Q8BSI6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
R3hcc1Q8BSI6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35,02■■■■□ 3,2
R3hcc1Q8BSI6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3,19
R3hcc1Q8BSI6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3,19
R3hcc1Q8BSI6 Gm24109-201ENSMUST00000175489 103 ntBASIC34,99■■■■□ 3,19
R3hcc1Q8BSI6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34,96■■■■□ 3,19
R3hcc1Q8BSI6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34,93■■■■□ 3,18
R3hcc1Q8BSI6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34,92■■■■□ 3,18
R3hcc1Q8BSI6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34,77■■■■□ 3,16
R3hcc1Q8BSI6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34,7■■■■□ 3,15
R3hcc1Q8BSI6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34,69■■■■□ 3,14
R3hcc1Q8BSI6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34,58■■■■□ 3,13
R3hcc1Q8BSI6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,57■■■■□ 3,12
R3hcc1Q8BSI6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34,44■■■■□ 3,1
R3hcc1Q8BSI6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,44■■■■□ 3,1
R3hcc1Q8BSI6 Gm23366-201ENSMUST00000175022 89 ntBASIC34,34■■■■□ 3,09
R3hcc1Q8BSI6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34,31■■■■□ 3,08
R3hcc1Q8BSI6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34,25■■■■□ 3,07
R3hcc1Q8BSI6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34,18■■■■□ 3,06
R3hcc1Q8BSI6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34,14■■■■□ 3,06
R3hcc1Q8BSI6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34,14■■■■□ 3,06
R3hcc1Q8BSI6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34,09■■■■□ 3,05
R3hcc1Q8BSI6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
R3hcc1Q8BSI6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
R3hcc1Q8BSI6 Gm10524-201ENSMUST00000181931 1893 ntBASIC34,06■■■■□ 3,04
R3hcc1Q8BSI6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33,99■■■■□ 3,03
R3hcc1Q8BSI6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33,93■■■■□ 3,02
R3hcc1Q8BSI6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33,8■■■■□ 3
R3hcc1Q8BSI6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,68■■■□□ 2,98
R3hcc1Q8BSI6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33,67■■■□□ 2,98
R3hcc1Q8BSI6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33,53■■■□□ 2,96
R3hcc1Q8BSI6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33,39■■■□□ 2,94
R3hcc1Q8BSI6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,3■■■□□ 2,92
R3hcc1Q8BSI6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33,25■■■□□ 2,91
R3hcc1Q8BSI6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33,17■■■□□ 2,9
R3hcc1Q8BSI6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33,16■■■□□ 2,9
R3hcc1Q8BSI6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33,1■■■□□ 2,89
R3hcc1Q8BSI6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33,09■■■□□ 2,89
R3hcc1Q8BSI6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33,05■■■□□ 2,88
R3hcc1Q8BSI6 Gm42596-201ENSMUST00000196305 1958 ntBASIC33■■■□□ 2,87
R3hcc1Q8BSI6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32,95■■■□□ 2,87
R3hcc1Q8BSI6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32,9■■■□□ 2,86
R3hcc1Q8BSI6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32,88■■■□□ 2,85
R3hcc1Q8BSI6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32,85■■■□□ 2,85
R3hcc1Q8BSI6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32,84■■■□□ 2,85
R3hcc1Q8BSI6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32,82■■■□□ 2,84
R3hcc1Q8BSI6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32,81■■■□□ 2,84
R3hcc1Q8BSI6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32,75■■■□□ 2,83
R3hcc1Q8BSI6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32,74■■■□□ 2,83
R3hcc1Q8BSI6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32,72■■■□□ 2,83
R3hcc1Q8BSI6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32,7■■■□□ 2,83
R3hcc1Q8BSI6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32,65■■■□□ 2,82
R3hcc1Q8BSI6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32,65■■■□□ 2,82
R3hcc1Q8BSI6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32,55■■■□□ 2,8
R3hcc1Q8BSI6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32,5■■■□□ 2,79
R3hcc1Q8BSI6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32,48■■■□□ 2,79
R3hcc1Q8BSI6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32,46■■■□□ 2,79
R3hcc1Q8BSI6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32,41■■■□□ 2,78
R3hcc1Q8BSI6 Gm27325-201ENSMUST00000175467 74 ntBASIC32,31■■■□□ 2,76
R3hcc1Q8BSI6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
R3hcc1Q8BSI6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,28■■■□□ 2,76
R3hcc1Q8BSI6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
R3hcc1Q8BSI6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32,27■■■□□ 2,76
R3hcc1Q8BSI6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32,26■■■□□ 2,76
R3hcc1Q8BSI6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32,21■■■□□ 2,75
R3hcc1Q8BSI6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC32,16■■■□□ 2,74
R3hcc1Q8BSI6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32,15■■■□□ 2,74
R3hcc1Q8BSI6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32,15■■■□□ 2,74
R3hcc1Q8BSI6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32,12■■■□□ 2,73
R3hcc1Q8BSI6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32,1■■■□□ 2,73
R3hcc1Q8BSI6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32,08■■■□□ 2,73
R3hcc1Q8BSI6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,06■■■□□ 2,72
R3hcc1Q8BSI6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC32,05■■■□□ 2,72
R3hcc1Q8BSI6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32,04■■■□□ 2,72
R3hcc1Q8BSI6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32,04■■■□□ 2,72
R3hcc1Q8BSI6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,01■■■□□ 2,71
R3hcc1Q8BSI6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31,94■■■□□ 2,7
R3hcc1Q8BSI6 Gm25238-201ENSMUST00000174914 89 ntBASIC31,94■■■□□ 2,7
R3hcc1Q8BSI6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31,92■■■□□ 2,7
R3hcc1Q8BSI6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,92■■■□□ 2,7
Retrieved 100 of 76,532 protein–RNA pairs in 10,7 ms