Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm25239-201ENSMUST00000174915 86 ntBASIC44.39■■■■■ 4.7
Smc1bQ920F6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.31■■■■■ 4.2
Smc1bQ920F6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
Smc1bQ920F6 Gm24109-201ENSMUST00000175489 103 ntBASIC38.74■■■■□ 3.79
Smc1bQ920F6 Gm15042-201ENSMUST00000120212 883 ntBASIC38.26■■■■□ 3.72
Smc1bQ920F6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
Smc1bQ920F6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.53■■■■□ 3.6
Smc1bQ920F6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Smc1bQ920F6 Gm15045-201ENSMUST00000117359 883 ntBASIC37.29■■■■□ 3.56
Smc1bQ920F6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
Smc1bQ920F6 Gm23366-201ENSMUST00000175022 89 ntBASIC37.03■■■■□ 3.52
Smc1bQ920F6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Smc1bQ920F6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.32■■■■□ 3.4
Smc1bQ920F6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.02■■■■□ 3.36
Smc1bQ920F6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Smc1bQ920F6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.92■■■■□ 3.34
Smc1bQ920F6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Smc1bQ920F6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Smc1bQ920F6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.74■■■■□ 3.31
Smc1bQ920F6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
Smc1bQ920F6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
Smc1bQ920F6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Smc1bQ920F6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.32■■■■□ 3.24
Smc1bQ920F6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Smc1bQ920F6 Gm25238-201ENSMUST00000174914 89 ntBASIC35.2■■■■□ 3.23
Smc1bQ920F6 Psd-208ENSMUST00000224556 2034 ntBASIC34.88■■■■□ 3.17
Smc1bQ920F6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Smc1bQ920F6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Smc1bQ920F6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.54■■■■□ 3.12
Smc1bQ920F6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Smc1bQ920F6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.29■■■■□ 3.08
Smc1bQ920F6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Smc1bQ920F6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Smc1bQ920F6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Smc1bQ920F6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.07■■■■□ 3.04
Smc1bQ920F6 Gm25262-201ENSMUST00000174934 133 ntBASIC34.06■■■■□ 3.04
Smc1bQ920F6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34■■■■□ 3.03
Smc1bQ920F6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34■■■■□ 3.03
Smc1bQ920F6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Smc1bQ920F6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.81■■■■□ 3
Smc1bQ920F6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Smc1bQ920F6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Smc1bQ920F6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.67■■■□□ 2.98
Smc1bQ920F6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
Smc1bQ920F6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.61■■■□□ 2.97
Smc1bQ920F6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.52■■■□□ 2.96
Smc1bQ920F6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.49■■■□□ 2.95
Smc1bQ920F6 Gm26115-201ENSMUST00000175605 87 ntBASIC33.44■■■□□ 2.94
Smc1bQ920F6 Gm27325-201ENSMUST00000175467 74 ntBASIC33.42■■■□□ 2.94
Smc1bQ920F6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.41■■■□□ 2.94
Smc1bQ920F6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Smc1bQ920F6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
Smc1bQ920F6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Smc1bQ920F6 Rab21-202ENSMUST00000218831 843 ntBASIC33.21■■■□□ 2.91
Smc1bQ920F6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Smc1bQ920F6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Smc1bQ920F6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.19■■■□□ 2.9
Smc1bQ920F6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Smc1bQ920F6 Gm8109-201ENSMUST00000194076 746 ntBASIC33.15■■■□□ 2.9
Smc1bQ920F6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Smc1bQ920F6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Smc1bQ920F6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Smc1bQ920F6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Smc1bQ920F6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Smc1bQ920F6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Smc1bQ920F6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Smc1bQ920F6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Smc1bQ920F6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Smc1bQ920F6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Smc1bQ920F6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.7■■■□□ 2.83
Smc1bQ920F6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.65■■■□□ 2.82
Smc1bQ920F6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Smc1bQ920F6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.62■■■□□ 2.81
Smc1bQ920F6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.54■■■□□ 2.8
Smc1bQ920F6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Smc1bQ920F6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
Smc1bQ920F6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Smc1bQ920F6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Smc1bQ920F6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.36■■■□□ 2.77
Smc1bQ920F6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Smc1bQ920F6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.22■■■□□ 2.75
Smc1bQ920F6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Smc1bQ920F6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Smc1bQ920F6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Smc1bQ920F6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Smc1bQ920F6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Smc1bQ920F6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Smc1bQ920F6 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.14■■■□□ 2.74
Smc1bQ920F6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Smc1bQ920F6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.06■■■□□ 2.72
Smc1bQ920F6 Gm24804-201ENSMUST00000174982 85 ntBASIC32.02■■■□□ 2.72
Smc1bQ920F6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Smc1bQ920F6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Smc1bQ920F6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.85■■■□□ 2.69
Smc1bQ920F6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
Smc1bQ920F6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Smc1bQ920F6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.82■■■□□ 2.69
Smc1bQ920F6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.81■■■□□ 2.68
Smc1bQ920F6 Gm27322-201ENSMUST00000184007 104 ntBASIC31.81■■■□□ 2.68
Smc1bQ920F6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.78■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms