Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm25239-201ENSMUST00000174915 86 ntBASIC41.33■■■■■ 4.21
Smc2Q8CG48 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
Smc2Q8CG48 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
Smc2Q8CG48 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
Smc2Q8CG48 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.84■■■■□ 3.65
Smc2Q8CG48 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
Smc2Q8CG48 Gm15042-201ENSMUST00000120212 883 ntBASIC36.84■■■■□ 3.49
Smc2Q8CG48 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Smc2Q8CG48 Psd-208ENSMUST00000224556 2034 ntBASIC36.37■■■■□ 3.41
Smc2Q8CG48 Gm15045-201ENSMUST00000117359 883 ntBASIC36.1■■■■□ 3.37
Smc2Q8CG48 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.77■■■■□ 3.32
Smc2Q8CG48 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Smc2Q8CG48 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.61■■■■□ 3.29
Smc2Q8CG48 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Smc2Q8CG48 Gm24109-201ENSMUST00000175489 103 ntBASIC35.46■■■■□ 3.27
Smc2Q8CG48 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Smc2Q8CG48 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Smc2Q8CG48 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Smc2Q8CG48 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Smc2Q8CG48 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
Smc2Q8CG48 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Smc2Q8CG48 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Smc2Q8CG48 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Smc2Q8CG48 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
Smc2Q8CG48 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
Smc2Q8CG48 Gm23366-201ENSMUST00000175022 89 ntBASIC34.67■■■■□ 3.14
Smc2Q8CG48 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.65■■■■□ 3.14
Smc2Q8CG48 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Smc2Q8CG48 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Smc2Q8CG48 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Smc2Q8CG48 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Smc2Q8CG48 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.34■■■■□ 3.09
Smc2Q8CG48 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
Smc2Q8CG48 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Smc2Q8CG48 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Smc2Q8CG48 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Smc2Q8CG48 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.9■■■■□ 3.02
Smc2Q8CG48 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.84■■■■□ 3.01
Smc2Q8CG48 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
Smc2Q8CG48 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Smc2Q8CG48 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.78■■■■□ 3
Smc2Q8CG48 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.77■■■■□ 3
Smc2Q8CG48 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Smc2Q8CG48 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.5■■■□□ 2.95
Smc2Q8CG48 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.48■■■□□ 2.95
Smc2Q8CG48 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
Smc2Q8CG48 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Smc2Q8CG48 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Smc2Q8CG48 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Smc2Q8CG48 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
Smc2Q8CG48 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Smc2Q8CG48 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Smc2Q8CG48 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Smc2Q8CG48 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Smc2Q8CG48 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.74■■■□□ 2.83
Smc2Q8CG48 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Smc2Q8CG48 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.73■■■□□ 2.83
Smc2Q8CG48 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Smc2Q8CG48 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Smc2Q8CG48 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
Smc2Q8CG48 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Smc2Q8CG48 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
Smc2Q8CG48 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.57■■■□□ 2.8
Smc2Q8CG48 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.52■■■□□ 2.8
Smc2Q8CG48 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Smc2Q8CG48 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.44■■■□□ 2.78
Smc2Q8CG48 Gm27325-201ENSMUST00000175467 74 ntBASIC32.42■■■□□ 2.78
Smc2Q8CG48 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.41■■■□□ 2.78
Smc2Q8CG48 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.38■■■□□ 2.77
Smc2Q8CG48 Gm25238-201ENSMUST00000174914 89 ntBASIC32.38■■■□□ 2.77
Smc2Q8CG48 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.37■■■□□ 2.77
Smc2Q8CG48 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Smc2Q8CG48 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Smc2Q8CG48 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Smc2Q8CG48 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.13■■■□□ 2.73
Smc2Q8CG48 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Smc2Q8CG48 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Smc2Q8CG48 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Smc2Q8CG48 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Smc2Q8CG48 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Smc2Q8CG48 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Smc2Q8CG48 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Smc2Q8CG48 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Smc2Q8CG48 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
Smc2Q8CG48 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Smc2Q8CG48 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Smc2Q8CG48 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
Smc2Q8CG48 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Smc2Q8CG48 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Smc2Q8CG48 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Smc2Q8CG48 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Smc2Q8CG48 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.75■■■□□ 2.67
Smc2Q8CG48 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Smc2Q8CG48 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.69■■■□□ 2.66
Smc2Q8CG48 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Smc2Q8CG48 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Smc2Q8CG48 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Smc2Q8CG48 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Smc2Q8CG48 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.61■■■□□ 2.65
Smc2Q8CG48 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.57■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms