RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Stmn4P63042 189 aa26.57■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Calcoco1Q8CGU1 691 aa26.57■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Homer1Q9Z2Y3 366 aa26.57■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Pik3c2gO70167 1506 aa26.56■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Vps37cQ8R105 352 aa26.56■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Cdan1Q8CC12 1239 aa26.56■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Chd1lQ9CXF7 900 aa26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 E9QMW4 1145 aa26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Slc7a3P70423 618 aa26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Eif3j1Q3UGC7 261 aaKnown RBP26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 GpkowQ56A08 488 aa26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Eif3j2Q66JS6 263 aa26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Nfxl1E9Q8I7 918 aaKnown RBP26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Kcnh5Q920E3 988 aa26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Setdb1O88974 1307 aa26.55■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Zfp853A0A1D5RM95 733 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Tnni2P13412 182 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Ift88Q61371 824 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Zscan29E9Q5B4 869 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Snx13Q6PHS6 957 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Sept6Q9R1T4 434 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Duxf3A0A0N4SV92 674 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Cct2P80314 535 aaKnown RBP26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Fam135aQ6NS59 1506 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Map3k7clP58500 142 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Caskin1Q6P9K8 1431 aa26.54■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Atf7ipQ7TT18 1306 aa26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Nup133Q8R0G9 1155 aa26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 SfpqQ8VIJ6 699 aaKnown RBP26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Abcc5Q9R1X5 1436 aa26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Speer4aF8VPX6 267 aa26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Opa1P58281 960 aa26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Nkx1-2P42580 305 aa26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Hsf2bpQ9D4G2 338 aa26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Klhl10Q9D5V2 608 aa26.53■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Aldh8a1Q8BH00 487 aa26.52■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Gramd4Q8CB44 633 aa26.52■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Catsper2A2ARP9 588 aa26.52■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Nlrp3Q8R4B8 1033 aa26.52■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Klhl30Q8C3F7 581 aa26.52■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Hs2st1Q8R3H7 356 aa26.52■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Rad50P70388 1312 aa26.51■■□□□ 1.84
Sh3rf1-201ENSMUST00000034060 Mug1P28665 1476 aa26.51■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Uspl1Q3ULM6 1089 aa26.51■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Kdm3aQ6PCM1 1323 aa26.51■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Syt1P46096 421 aa26.51■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Gle1Q8R322 699 aa26.51■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Zfp251Q6PCX8 632 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Mkrn1Q9QXP6 481 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Diaph1O08808 1255 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Ccdc114Q3UX62 658 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Fgd6Q69ZL1 1399 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Sycp2lA0A0M3U1B0 842 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Tyro3P55144 880 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Nphp3Q7TNH6 1325 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 DesP31001 469 aaKnown RBP26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Ell2Q3UKU1 639 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Ppip5k1A2ARP1 1436 aa26.5■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Metap2O08663 478 aaKnown RBP26.49■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Gtf3c5Q8R2T8 520 aa26.49■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Rassf4Q8CB96 322 aa26.49■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Chrna2Q91X60 512 aa26.49■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Vps36Q91XD6 386 aa26.49■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 NpcdF8VQB8 469 aa26.49■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 ZgpatQ8VDM1 511 aa26.49■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Rasal2E9PW37 1286 aa26.49■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Gm28919A0A087WP35 240 aa26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Brd1E9PZ26 1189 aaKnown RBP26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Zfp42P22227 288 aa26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Top1Q04750 767 aaKnown RBP26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Zfp397Q7TNK4 527 aa26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Tmx3Q8BXZ1 456 aa26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Ctnnbl1Q9CWL8 563 aaKnown RBP26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Irx4Q9QY61 515 aa26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Arfgap2Q99K28 520 aa26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Yeats4Q9CR11 227 aaKnown RBP26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Pkd2l2Q9JLG4 621 aa26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Six6os1Q9CTN5 574 aa26.48■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Ttc21bQ0HA38 1315 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Specc1Q5SXY1 1067 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Zkscan4Q5SZT6 480 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Tubb2aQ7TMM9 445 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Sh3d21Q7TSG5 549 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Tubb2bQ9CWF2 445 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Tagap1P0CAX8 505 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Fgfr1opQ66JX5 399 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 PdiltQ9DAN1 588 aa26.47■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Cacna2d4Q5RJF7 1116 aa26.46■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Rsph10bE9PYQ0 876 aa26.46■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Irf9Q61179 399 aa26.46■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Ccdc186Q8C9S4 917 aa26.46■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 CadpsQ80TJ1 1355 aa26.46■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Trim27Q62158 513 aa26.46■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Ccdc148Q6P5U8 527 aa26.46■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Fam177a1Q8BR63 207 aa26.45■■□□□ 1.83
Sh3rf1-201ENSMUST00000034060 Gnat3Q3V3I2 354 aa26.45■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Paip2Q9D6V8 124 aa26.45■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Mlh3A0A1Y7VMP7 1443 aa26.45■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Atp8b3Q6UQ17 1335 aa26.45■■□□□ 1.82
Sh3rf1-201ENSMUST00000034060 Tnnc1P19123 161 aa26.45■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms