Protein–RNA interactions for Protein: Q8R4B8

Nlrp3, NACHT, LRR and PYD domains-containing protein 3, mousemouse

Predictions only

Length 1,033 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrp3Q8R4B8 Gm25239-201ENSMUST00000174915 86 ntBASIC48,98■■■■■ 5,43
Nlrp3Q8R4B8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC45,35■■■■■ 4,85
Nlrp3Q8R4B8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC44,73■■■■■ 4,75
Nlrp3Q8R4B8 Gm15042-201ENSMUST00000120212 883 ntBASIC42,68■■■■■ 4,42
Nlrp3Q8R4B8 Gm24109-201ENSMUST00000175489 103 ntBASIC42,48■■■■■ 4,39
Nlrp3Q8R4B8 Gm15045-201ENSMUST00000117359 883 ntBASIC41,69■■■■■ 4,26
Nlrp3Q8R4B8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC41,48■■■■■ 4,23
Nlrp3Q8R4B8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC41,36■■■■■ 4,21
Nlrp3Q8R4B8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41,25■■■■■ 4,19
Nlrp3Q8R4B8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC41,2■■■■■ 4,19
Nlrp3Q8R4B8 Gm23366-201ENSMUST00000175022 89 ntBASIC40,9■■■■■ 4,14
Nlrp3Q8R4B8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC40,68■■■■■ 4,1
Nlrp3Q8R4B8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40,67■■■■■ 4,1
Nlrp3Q8R4B8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39,98■■■■□ 3,99
Nlrp3Q8R4B8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39,86■■■■□ 3,97
Nlrp3Q8R4B8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39,68■■■■□ 3,94
Nlrp3Q8R4B8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39,46■■■■□ 3,91
Nlrp3Q8R4B8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39,38■■■■□ 3,89
Nlrp3Q8R4B8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39,27■■■■□ 3,88
Nlrp3Q8R4B8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39,24■■■■□ 3,87
Nlrp3Q8R4B8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39,23■■■■□ 3,87
Nlrp3Q8R4B8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC39,16■■■■□ 3,86
Nlrp3Q8R4B8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC39,1■■■■□ 3,85
Nlrp3Q8R4B8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC39,02■■■■□ 3,84
Nlrp3Q8R4B8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38,87■■■■□ 3,81
Nlrp3Q8R4B8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38,81■■■■□ 3,8
Nlrp3Q8R4B8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38,76■■■■□ 3,8
Nlrp3Q8R4B8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38,73■■■■□ 3,79
Nlrp3Q8R4B8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC38,72■■■■□ 3,79
Nlrp3Q8R4B8 Gm25238-201ENSMUST00000174914 89 ntBASIC38,71■■■■□ 3,79
Nlrp3Q8R4B8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38,65■■■■□ 3,78
Nlrp3Q8R4B8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38,63■■■■□ 3,77
Nlrp3Q8R4B8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38,39■■■■□ 3,74
Nlrp3Q8R4B8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC38,39■■■■□ 3,74
Nlrp3Q8R4B8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38,22■■■■□ 3,71
Nlrp3Q8R4B8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37,96■■■■□ 3,67
Nlrp3Q8R4B8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37,94■■■■□ 3,66
Nlrp3Q8R4B8 Psd-208ENSMUST00000224556 2034 ntBASIC37,84■■■■□ 3,65
Nlrp3Q8R4B8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC37,72■■■■□ 3,63
Nlrp3Q8R4B8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37,69■■■■□ 3,62
Nlrp3Q8R4B8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC37,68■■■■□ 3,62
Nlrp3Q8R4B8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37,63■■■■□ 3,61
Nlrp3Q8R4B8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC37,5■■■■□ 3,59
Nlrp3Q8R4B8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC37,5■■■■□ 3,59
Nlrp3Q8R4B8 Gm27325-201ENSMUST00000175467 74 ntBASIC37,39■■■■□ 3,58
Nlrp3Q8R4B8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37,26■■■■□ 3,56
Nlrp3Q8R4B8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37,25■■■■□ 3,55
Nlrp3Q8R4B8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37,22■■■■□ 3,55
Nlrp3Q8R4B8 Gm25262-201ENSMUST00000174934 133 ntBASIC37,16■■■■□ 3,54
Nlrp3Q8R4B8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37,05■■■■□ 3,52
Nlrp3Q8R4B8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36,94■■■■□ 3,5
Nlrp3Q8R4B8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36,92■■■■□ 3,5
Nlrp3Q8R4B8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36,86■■■■□ 3,49
Nlrp3Q8R4B8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36,82■■■■□ 3,49
Nlrp3Q8R4B8 Rab21-202ENSMUST00000218831 843 ntBASIC36,79■■■■□ 3,48
Nlrp3Q8R4B8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36,76■■■■□ 3,48
Nlrp3Q8R4B8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC36,71■■■■□ 3,47
Nlrp3Q8R4B8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36,66■■■■□ 3,46
Nlrp3Q8R4B8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36,6■■■■□ 3,45
Nlrp3Q8R4B8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC36,56■■■■□ 3,44
Nlrp3Q8R4B8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36,51■■■■□ 3,44
Nlrp3Q8R4B8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36,44■■■■□ 3,42
Nlrp3Q8R4B8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC36,44■■■■□ 3,42
Nlrp3Q8R4B8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36,42■■■■□ 3,42
Nlrp3Q8R4B8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC36,4■■■■□ 3,42
Nlrp3Q8R4B8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36,38■■■■□ 3,41
Nlrp3Q8R4B8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36,36■■■■□ 3,41
Nlrp3Q8R4B8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36,34■■■■□ 3,41
Nlrp3Q8R4B8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36,31■■■■□ 3,4
Nlrp3Q8R4B8 Gm26115-201ENSMUST00000175605 87 ntBASIC36,28■■■■□ 3,4
Nlrp3Q8R4B8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36,27■■■■□ 3,4
Nlrp3Q8R4B8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36,25■■■■□ 3,39
Nlrp3Q8R4B8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36,19■■■■□ 3,38
Nlrp3Q8R4B8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36,16■■■■□ 3,38
Nlrp3Q8R4B8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36,15■■■■□ 3,38
Nlrp3Q8R4B8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC36,13■■■■□ 3,37
Nlrp3Q8R4B8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36,12■■■■□ 3,37
Nlrp3Q8R4B8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC36,07■■■■□ 3,36
Nlrp3Q8R4B8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC36,06■■■■□ 3,36
Nlrp3Q8R4B8 Gm8109-201ENSMUST00000194076 746 ntBASIC36,05■■■■□ 3,36
Nlrp3Q8R4B8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC36,04■■■■□ 3,36
Nlrp3Q8R4B8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36,03■■■■□ 3,36
Nlrp3Q8R4B8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,92■■■■□ 3,34
Nlrp3Q8R4B8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35,91■■■■□ 3,34
Nlrp3Q8R4B8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35,91■■■■□ 3,34
Nlrp3Q8R4B8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35,9■■■■□ 3,34
Nlrp3Q8R4B8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,89■■■■□ 3,34
Nlrp3Q8R4B8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35,84■■■■□ 3,33
Nlrp3Q8R4B8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35,84■■■■□ 3,33
Nlrp3Q8R4B8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35,83■■■■□ 3,33
Nlrp3Q8R4B8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35,82■■■■□ 3,32
Nlrp3Q8R4B8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35,79■■■■□ 3,32
Nlrp3Q8R4B8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,73■■■■□ 3,31
Nlrp3Q8R4B8 Gm10524-201ENSMUST00000181931 1893 ntBASIC35,72■■■■□ 3,31
Nlrp3Q8R4B8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35,67■■■■□ 3,3
Nlrp3Q8R4B8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35,64■■■■□ 3,3
Nlrp3Q8R4B8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35,63■■■■□ 3,29
Nlrp3Q8R4B8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,54■■■■□ 3,28
Nlrp3Q8R4B8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35,54■■■■□ 3,28
Nlrp3Q8R4B8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35,53■■■■□ 3,28
Retrieved 100 of 76,532 protein–RNA pairs in 14,2 ms