Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Gm25239-201ENSMUST00000174915 86 ntBASIC36.58■■■■□ 3.45
SfpqQ8VIJ6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
SfpqQ8VIJ6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
SfpqQ8VIJ6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.11■■■■□ 3.21
SfpqQ8VIJ6 Psd-208ENSMUST00000224556 2034 ntBASIC33.97■■■■□ 3.03
SfpqQ8VIJ6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
SfpqQ8VIJ6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
SfpqQ8VIJ6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SfpqQ8VIJ6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
SfpqQ8VIJ6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SfpqQ8VIJ6 Gm15042-201ENSMUST00000120212 883 ntBASIC32.91■■■□□ 2.86
SfpqQ8VIJ6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SfpqQ8VIJ6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
SfpqQ8VIJ6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SfpqQ8VIJ6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SfpqQ8VIJ6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.51■■■□□ 2.79
SfpqQ8VIJ6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
SfpqQ8VIJ6 Gm15045-201ENSMUST00000117359 883 ntBASIC32.29■■■□□ 2.76
SfpqQ8VIJ6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
SfpqQ8VIJ6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SfpqQ8VIJ6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
SfpqQ8VIJ6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SfpqQ8VIJ6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SfpqQ8VIJ6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SfpqQ8VIJ6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SfpqQ8VIJ6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SfpqQ8VIJ6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SfpqQ8VIJ6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.53■■■□□ 2.64
SfpqQ8VIJ6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
SfpqQ8VIJ6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SfpqQ8VIJ6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.38■■■□□ 2.61
SfpqQ8VIJ6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SfpqQ8VIJ6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SfpqQ8VIJ6 Gm24109-201ENSMUST00000175489 103 ntBASIC31.23■■■□□ 2.59
SfpqQ8VIJ6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
SfpqQ8VIJ6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SfpqQ8VIJ6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.1■■■□□ 2.57
SfpqQ8VIJ6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SfpqQ8VIJ6 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.93■■■□□ 2.54
SfpqQ8VIJ6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.87■■■□□ 2.53
SfpqQ8VIJ6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SfpqQ8VIJ6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SfpqQ8VIJ6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SfpqQ8VIJ6 Gm23366-201ENSMUST00000175022 89 ntBASIC30.72■■■□□ 2.51
SfpqQ8VIJ6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SfpqQ8VIJ6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SfpqQ8VIJ6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SfpqQ8VIJ6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SfpqQ8VIJ6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.42■■■□□ 2.46
SfpqQ8VIJ6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SfpqQ8VIJ6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SfpqQ8VIJ6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.24■■■□□ 2.43
SfpqQ8VIJ6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SfpqQ8VIJ6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SfpqQ8VIJ6 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.19■■■□□ 2.42
SfpqQ8VIJ6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SfpqQ8VIJ6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SfpqQ8VIJ6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SfpqQ8VIJ6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.05■■■□□ 2.4
SfpqQ8VIJ6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SfpqQ8VIJ6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SfpqQ8VIJ6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SfpqQ8VIJ6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SfpqQ8VIJ6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SfpqQ8VIJ6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SfpqQ8VIJ6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
SfpqQ8VIJ6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SfpqQ8VIJ6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
SfpqQ8VIJ6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
SfpqQ8VIJ6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SfpqQ8VIJ6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SfpqQ8VIJ6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
SfpqQ8VIJ6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SfpqQ8VIJ6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
SfpqQ8VIJ6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SfpqQ8VIJ6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SfpqQ8VIJ6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SfpqQ8VIJ6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SfpqQ8VIJ6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SfpqQ8VIJ6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SfpqQ8VIJ6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
SfpqQ8VIJ6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.26■■■□□ 2.28
SfpqQ8VIJ6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SfpqQ8VIJ6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.23■■■□□ 2.27
SfpqQ8VIJ6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
SfpqQ8VIJ6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SfpqQ8VIJ6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
SfpqQ8VIJ6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SfpqQ8VIJ6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SfpqQ8VIJ6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
SfpqQ8VIJ6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SfpqQ8VIJ6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SfpqQ8VIJ6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SfpqQ8VIJ6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
SfpqQ8VIJ6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SfpqQ8VIJ6 Gm27325-201ENSMUST00000175467 74 ntBASIC29■■■□□ 2.23
SfpqQ8VIJ6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SfpqQ8VIJ6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SfpqQ8VIJ6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
SfpqQ8VIJ6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms