Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Gm25239-201ENSMUST00000174915 86 ntBASIC36.68■■■■□ 3.46
Calcoco1Q8CGU1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Calcoco1Q8CGU1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Calcoco1Q8CGU1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
Calcoco1Q8CGU1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Calcoco1Q8CGU1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Calcoco1Q8CGU1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.86
Calcoco1Q8CGU1 Psd-208ENSMUST00000224556 2034 ntBASIC32.6■■■□□ 2.81
Calcoco1Q8CGU1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Calcoco1Q8CGU1 Gm15042-201ENSMUST00000120212 883 ntBASIC32.23■■■□□ 2.75
Calcoco1Q8CGU1 Gm24109-201ENSMUST00000175489 103 ntBASIC31.7■■■□□ 2.67
Calcoco1Q8CGU1 Gm15045-201ENSMUST00000117359 883 ntBASIC31.55■■■□□ 2.64
Calcoco1Q8CGU1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Calcoco1Q8CGU1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Calcoco1Q8CGU1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Calcoco1Q8CGU1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Calcoco1Q8CGU1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Calcoco1Q8CGU1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Calcoco1Q8CGU1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.89■■■□□ 2.53
Calcoco1Q8CGU1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Calcoco1Q8CGU1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Calcoco1Q8CGU1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Calcoco1Q8CGU1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Calcoco1Q8CGU1 Gm23366-201ENSMUST00000175022 89 ntBASIC30.66■■■□□ 2.5
Calcoco1Q8CGU1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Calcoco1Q8CGU1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Calcoco1Q8CGU1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Calcoco1Q8CGU1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Calcoco1Q8CGU1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Calcoco1Q8CGU1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Calcoco1Q8CGU1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.22■■■□□ 2.43
Calcoco1Q8CGU1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Calcoco1Q8CGU1 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.11■■■□□ 2.41
Calcoco1Q8CGU1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Calcoco1Q8CGU1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Calcoco1Q8CGU1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Calcoco1Q8CGU1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Calcoco1Q8CGU1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Calcoco1Q8CGU1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Calcoco1Q8CGU1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
Calcoco1Q8CGU1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Calcoco1Q8CGU1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Calcoco1Q8CGU1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.59■■■□□ 2.33
Calcoco1Q8CGU1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Calcoco1Q8CGU1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.57■■■□□ 2.32
Calcoco1Q8CGU1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Calcoco1Q8CGU1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.5■■■□□ 2.31
Calcoco1Q8CGU1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Calcoco1Q8CGU1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.38■■■□□ 2.29
Calcoco1Q8CGU1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Calcoco1Q8CGU1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.37■■■□□ 2.29
Calcoco1Q8CGU1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.36■■■□□ 2.29
Calcoco1Q8CGU1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
Calcoco1Q8CGU1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.26■■■□□ 2.27
Calcoco1Q8CGU1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Calcoco1Q8CGU1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.15■■■□□ 2.26
Calcoco1Q8CGU1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Calcoco1Q8CGU1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Calcoco1Q8CGU1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.05■■■□□ 2.24
Calcoco1Q8CGU1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Calcoco1Q8CGU1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Calcoco1Q8CGU1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Calcoco1Q8CGU1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Calcoco1Q8CGU1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
Calcoco1Q8CGU1 Gm25238-201ENSMUST00000174914 89 ntBASIC28.89■■■□□ 2.22
Calcoco1Q8CGU1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Calcoco1Q8CGU1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.84■■■□□ 2.21
Calcoco1Q8CGU1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Calcoco1Q8CGU1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Calcoco1Q8CGU1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Calcoco1Q8CGU1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Calcoco1Q8CGU1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
Calcoco1Q8CGU1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Calcoco1Q8CGU1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Calcoco1Q8CGU1 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.57■■■□□ 2.16
Calcoco1Q8CGU1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Calcoco1Q8CGU1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.5■■■□□ 2.15
Calcoco1Q8CGU1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Calcoco1Q8CGU1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.46■■■□□ 2.15
Calcoco1Q8CGU1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Calcoco1Q8CGU1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.43■■■□□ 2.14
Calcoco1Q8CGU1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Calcoco1Q8CGU1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Calcoco1Q8CGU1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Calcoco1Q8CGU1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.36■■■□□ 2.13
Calcoco1Q8CGU1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Calcoco1Q8CGU1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Calcoco1Q8CGU1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
Calcoco1Q8CGU1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.3■■■□□ 2.12
Calcoco1Q8CGU1 Gm27325-201ENSMUST00000175467 74 ntBASIC28.27■■■□□ 2.12
Calcoco1Q8CGU1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Calcoco1Q8CGU1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Calcoco1Q8CGU1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Calcoco1Q8CGU1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Calcoco1Q8CGU1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Calcoco1Q8CGU1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Calcoco1Q8CGU1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Calcoco1Q8CGU1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Calcoco1Q8CGU1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Calcoco1Q8CGU1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms