Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Gm25239-201ENSMUST00000174915 86 ntBASIC46,52■■■■■ 5,04
Kdm3aQ6PCM1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42,88■■■■■ 4,45
Kdm3aQ6PCM1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42,35■■■■■ 4,37
Kdm3aQ6PCM1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41,04■■■■■ 4,16
Kdm3aQ6PCM1 Gm15042-201ENSMUST00000120212 883 ntBASIC40,95■■■■■ 4,15
Kdm3aQ6PCM1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40,24■■■■■ 4,03
Kdm3aQ6PCM1 Gm24109-201ENSMUST00000175489 103 ntBASIC40,19■■■■■ 4,02
Kdm3aQ6PCM1 Gm15045-201ENSMUST00000117359 883 ntBASIC40,08■■■■■ 4,01
Kdm3aQ6PCM1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39,74■■■■□ 3,95
Kdm3aQ6PCM1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39,61■■■■□ 3,93
Kdm3aQ6PCM1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39,27■■■■□ 3,88
Kdm3aQ6PCM1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39,02■■■■□ 3,84
Kdm3aQ6PCM1 Gm23366-201ENSMUST00000175022 89 ntBASIC38,93■■■■□ 3,82
Kdm3aQ6PCM1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38,71■■■■□ 3,79
Kdm3aQ6PCM1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38,7■■■■□ 3,79
Kdm3aQ6PCM1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38,32■■■■□ 3,73
Kdm3aQ6PCM1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38,15■■■■□ 3,7
Kdm3aQ6PCM1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38,03■■■■□ 3,68
Kdm3aQ6PCM1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37,93■■■■□ 3,66
Kdm3aQ6PCM1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37,87■■■■□ 3,65
Kdm3aQ6PCM1 Psd-208ENSMUST00000224556 2034 ntBASIC37,84■■■■□ 3,65
Kdm3aQ6PCM1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37,74■■■■□ 3,63
Kdm3aQ6PCM1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37,72■■■■□ 3,63
Kdm3aQ6PCM1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37,62■■■■□ 3,61
Kdm3aQ6PCM1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37,6■■■■□ 3,61
Kdm3aQ6PCM1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37,6■■■■□ 3,61
Kdm3aQ6PCM1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37,52■■■■□ 3,6
Kdm3aQ6PCM1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37,48■■■■□ 3,59
Kdm3aQ6PCM1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37,35■■■■□ 3,57
Kdm3aQ6PCM1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37,14■■■■□ 3,54
Kdm3aQ6PCM1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36,94■■■■□ 3,5
Kdm3aQ6PCM1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36,91■■■■□ 3,5
Kdm3aQ6PCM1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36,89■■■■□ 3,5
Kdm3aQ6PCM1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36,85■■■■□ 3,49
Kdm3aQ6PCM1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36,75■■■■□ 3,47
Kdm3aQ6PCM1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36,74■■■■□ 3,47
Kdm3aQ6PCM1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36,69■■■■□ 3,46
Kdm3aQ6PCM1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36,63■■■■□ 3,45
Kdm3aQ6PCM1 Gm25238-201ENSMUST00000174914 89 ntBASIC36,59■■■■□ 3,45
Kdm3aQ6PCM1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36,54■■■■□ 3,44
Kdm3aQ6PCM1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36,37■■■■□ 3,41
Kdm3aQ6PCM1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36,3■■■■□ 3,4
Kdm3aQ6PCM1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36,18■■■■□ 3,38
Kdm3aQ6PCM1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36,14■■■■□ 3,38
Kdm3aQ6PCM1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36,05■■■■□ 3,36
Kdm3aQ6PCM1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36,04■■■■□ 3,36
Kdm3aQ6PCM1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35,99■■■■□ 3,35
Kdm3aQ6PCM1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35,99■■■■□ 3,35
Kdm3aQ6PCM1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35,95■■■■□ 3,35
Kdm3aQ6PCM1 Gm27325-201ENSMUST00000175467 74 ntBASIC35,93■■■■□ 3,34
Kdm3aQ6PCM1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35,83■■■■□ 3,33
Kdm3aQ6PCM1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35,79■■■■□ 3,32
Kdm3aQ6PCM1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35,65■■■■□ 3,3
Kdm3aQ6PCM1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35,64■■■■□ 3,3
Kdm3aQ6PCM1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35,63■■■■□ 3,29
Kdm3aQ6PCM1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,57■■■■□ 3,28
Kdm3aQ6PCM1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35,55■■■■□ 3,28
Kdm3aQ6PCM1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35,48■■■■□ 3,27
Kdm3aQ6PCM1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35,47■■■■□ 3,27
Kdm3aQ6PCM1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35,45■■■■□ 3,27
Kdm3aQ6PCM1 Gm10524-201ENSMUST00000181931 1893 ntBASIC35,39■■■■□ 3,26
Kdm3aQ6PCM1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35,38■■■■□ 3,25
Kdm3aQ6PCM1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35,35■■■■□ 3,25
Kdm3aQ6PCM1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,33■■■■□ 3,25
Kdm3aQ6PCM1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35,28■■■■□ 3,24
Kdm3aQ6PCM1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35,28■■■■□ 3,24
Kdm3aQ6PCM1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35,22■■■■□ 3,23
Kdm3aQ6PCM1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35,2■■■■□ 3,23
Kdm3aQ6PCM1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,17■■■■□ 3,22
Kdm3aQ6PCM1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,16■■■■□ 3,22
Kdm3aQ6PCM1 Rab21-202ENSMUST00000218831 843 ntBASIC35,14■■■■□ 3,22
Kdm3aQ6PCM1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35,07■■■■□ 3,21
Kdm3aQ6PCM1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35,05■■■■□ 3,2
Kdm3aQ6PCM1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35,04■■■■□ 3,2
Kdm3aQ6PCM1 Gm25262-201ENSMUST00000174934 133 ntBASIC34,98■■■■□ 3,19
Kdm3aQ6PCM1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34,98■■■■□ 3,19
Kdm3aQ6PCM1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34,97■■■■□ 3,19
Kdm3aQ6PCM1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34,91■■■■□ 3,18
Kdm3aQ6PCM1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34,9■■■■□ 3,18
Kdm3aQ6PCM1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34,84■■■■□ 3,17
Kdm3aQ6PCM1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34,83■■■■□ 3,17
Kdm3aQ6PCM1 Gm42596-201ENSMUST00000196305 1958 ntBASIC34,79■■■■□ 3,16
Kdm3aQ6PCM1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34,78■■■■□ 3,16
Kdm3aQ6PCM1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34,65■■■■□ 3,14
Kdm3aQ6PCM1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34,62■■■■□ 3,13
Kdm3aQ6PCM1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34,61■■■■□ 3,13
Kdm3aQ6PCM1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34,6■■■■□ 3,13
Kdm3aQ6PCM1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34,55■■■■□ 3,12
Kdm3aQ6PCM1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34,55■■■■□ 3,12
Kdm3aQ6PCM1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34,54■■■■□ 3,12
Kdm3aQ6PCM1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,48■■■■□ 3,11
Kdm3aQ6PCM1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,41■■■■□ 3,1
Kdm3aQ6PCM1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,35■■■■□ 3,09
Kdm3aQ6PCM1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34,35■■■■□ 3,09
Kdm3aQ6PCM1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34,3■■■■□ 3,08
Kdm3aQ6PCM1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34,3■■■■□ 3,08
Kdm3aQ6PCM1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34,3■■■■□ 3,08
Kdm3aQ6PCM1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34,29■■■■□ 3,08
Kdm3aQ6PCM1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34,27■■■■□ 3,08
Kdm3aQ6PCM1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34,26■■■■□ 3,07
Retrieved 100 of 76,532 protein–RNA pairs in 11,9 ms