Protein–RNA interactions for Protein: Q8CB44

Gramd4, GRAM domain-containing protein 4, mousemouse

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gramd4Q8CB44 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35,69■■■■□ 3,3
Gramd4Q8CB44 Gm25239-201ENSMUST00000174915 86 ntBASIC34,95■■■■□ 3,19
Gramd4Q8CB44 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34,43■■■■□ 3,1
Gramd4Q8CB44 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34,35■■■■□ 3,09
Gramd4Q8CB44 Psd-208ENSMUST00000224556 2034 ntBASIC33,51■■■□□ 2,95
Gramd4Q8CB44 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33,28■■■□□ 2,92
Gramd4Q8CB44 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32,75■■■□□ 2,83
Gramd4Q8CB44 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Gramd4Q8CB44 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,46■■■□□ 2,79
Gramd4Q8CB44 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,4■■■□□ 2,78
Gramd4Q8CB44 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32,03■■■□□ 2,72
Gramd4Q8CB44 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,01■■■□□ 2,71
Gramd4Q8CB44 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31,95■■■□□ 2,71
Gramd4Q8CB44 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31,94■■■□□ 2,7
Gramd4Q8CB44 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,92■■■□□ 2,7
Gramd4Q8CB44 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31,51■■■□□ 2,63
Gramd4Q8CB44 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Gramd4Q8CB44 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31,42■■■□□ 2,62
Gramd4Q8CB44 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Gramd4Q8CB44 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31,15■■■□□ 2,58
Gramd4Q8CB44 Gm15042-201ENSMUST00000120212 883 ntBASIC31,14■■■□□ 2,58
Gramd4Q8CB44 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31,08■■■□□ 2,57
Gramd4Q8CB44 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31,06■■■□□ 2,56
Gramd4Q8CB44 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,02■■■□□ 2,56
Gramd4Q8CB44 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,77■■■□□ 2,52
Gramd4Q8CB44 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Gramd4Q8CB44 Gm15045-201ENSMUST00000117359 883 ntBASIC30,61■■■□□ 2,49
Gramd4Q8CB44 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30,53■■■□□ 2,48
Gramd4Q8CB44 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30,46■■■□□ 2,47
Gramd4Q8CB44 Gm24109-201ENSMUST00000175489 103 ntBASIC30,45■■■□□ 2,47
Gramd4Q8CB44 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30,38■■■□□ 2,45
Gramd4Q8CB44 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30,36■■■□□ 2,45
Gramd4Q8CB44 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30,32■■■□□ 2,44
Gramd4Q8CB44 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Gramd4Q8CB44 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30,25■■■□□ 2,43
Gramd4Q8CB44 Gm10524-201ENSMUST00000181931 1893 ntBASIC30,21■■■□□ 2,43
Gramd4Q8CB44 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,2■■■□□ 2,43
Gramd4Q8CB44 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Gramd4Q8CB44 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Gramd4Q8CB44 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30,14■■■□□ 2,42
Gramd4Q8CB44 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Gramd4Q8CB44 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Gramd4Q8CB44 Gm42596-201ENSMUST00000196305 1958 ntBASIC30,06■■■□□ 2,4
Gramd4Q8CB44 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29,96■■■□□ 2,39
Gramd4Q8CB44 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29,86■■■□□ 2,37
Gramd4Q8CB44 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,85■■■□□ 2,37
Gramd4Q8CB44 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29,84■■■□□ 2,37
Gramd4Q8CB44 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Gramd4Q8CB44 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Gramd4Q8CB44 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29,73■■■□□ 2,35
Gramd4Q8CB44 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29,72■■■□□ 2,35
Gramd4Q8CB44 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Gramd4Q8CB44 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,58■■■□□ 2,33
Gramd4Q8CB44 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Gramd4Q8CB44 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29,56■■■□□ 2,32
Gramd4Q8CB44 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Gramd4Q8CB44 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,51■■■□□ 2,31
Gramd4Q8CB44 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Gramd4Q8CB44 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
Gramd4Q8CB44 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29,26■■■□□ 2,27
Gramd4Q8CB44 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29,23■■■□□ 2,27
Gramd4Q8CB44 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29,23■■■□□ 2,27
Gramd4Q8CB44 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Gramd4Q8CB44 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29,2■■■□□ 2,27
Gramd4Q8CB44 Gm23366-201ENSMUST00000175022 89 ntBASIC29,19■■■□□ 2,26
Gramd4Q8CB44 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Gramd4Q8CB44 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29,15■■■□□ 2,26
Gramd4Q8CB44 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29,05■■■□□ 2,24
Gramd4Q8CB44 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
Gramd4Q8CB44 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
Gramd4Q8CB44 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29■■■□□ 2,23
Gramd4Q8CB44 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,99■■■□□ 2,23
Gramd4Q8CB44 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28,95■■■□□ 2,22
Gramd4Q8CB44 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Gramd4Q8CB44 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,9■■■□□ 2,22
Gramd4Q8CB44 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28,88■■■□□ 2,21
Gramd4Q8CB44 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28,84■■■□□ 2,21
Gramd4Q8CB44 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28,81■■■□□ 2,2
Gramd4Q8CB44 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28,8■■■□□ 2,2
Gramd4Q8CB44 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Gramd4Q8CB44 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28,76■■■□□ 2,19
Gramd4Q8CB44 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28,74■■■□□ 2,19
Gramd4Q8CB44 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Gramd4Q8CB44 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28,65■■■□□ 2,18
Gramd4Q8CB44 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28,64■■■□□ 2,18
Gramd4Q8CB44 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,62■■■□□ 2,17
Gramd4Q8CB44 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28,6■■■□□ 2,17
Gramd4Q8CB44 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28,53■■■□□ 2,16
Gramd4Q8CB44 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,5■■■□□ 2,15
Gramd4Q8CB44 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Gramd4Q8CB44 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28,45■■■□□ 2,15
Gramd4Q8CB44 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28,44■■■□□ 2,14
Gramd4Q8CB44 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Gramd4Q8CB44 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Gramd4Q8CB44 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28,39■■■□□ 2,14
Gramd4Q8CB44 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28,34■■■□□ 2,13
Gramd4Q8CB44 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28,32■■■□□ 2,12
Gramd4Q8CB44 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Gramd4Q8CB44 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Gramd4Q8CB44 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Retrieved 100 of 76,532 protein–RNA pairs in 15,5 ms