Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Gm25239-201ENSMUST00000174915 86 ntBASIC41.21■■■■■ 4.19
Cacna2d4Q5RJF7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
Cacna2d4Q5RJF7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
Cacna2d4Q5RJF7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Cacna2d4Q5RJF7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Cacna2d4Q5RJF7 Gm15042-201ENSMUST00000120212 883 ntBASIC36.44■■■■□ 3.42
Cacna2d4Q5RJF7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.31■■■■□ 3.4
Cacna2d4Q5RJF7 Gm15045-201ENSMUST00000117359 883 ntBASIC35.66■■■■□ 3.3
Cacna2d4Q5RJF7 Gm24109-201ENSMUST00000175489 103 ntBASIC35.48■■■■□ 3.27
Cacna2d4Q5RJF7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Cacna2d4Q5RJF7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Cacna2d4Q5RJF7 Psd-208ENSMUST00000224556 2034 ntBASIC34.76■■■■□ 3.16
Cacna2d4Q5RJF7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
Cacna2d4Q5RJF7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.61■■■■□ 3.13
Cacna2d4Q5RJF7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Cacna2d4Q5RJF7 Gm23366-201ENSMUST00000175022 89 ntBASIC34.5■■■■□ 3.11
Cacna2d4Q5RJF7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
Cacna2d4Q5RJF7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Cacna2d4Q5RJF7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Cacna2d4Q5RJF7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
Cacna2d4Q5RJF7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Cacna2d4Q5RJF7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Cacna2d4Q5RJF7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
Cacna2d4Q5RJF7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.9■■■■□ 3.02
Cacna2d4Q5RJF7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
Cacna2d4Q5RJF7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Cacna2d4Q5RJF7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.71■■■□□ 2.99
Cacna2d4Q5RJF7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Cacna2d4Q5RJF7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Cacna2d4Q5RJF7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Cacna2d4Q5RJF7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.55■■■□□ 2.96
Cacna2d4Q5RJF7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.47■■■□□ 2.95
Cacna2d4Q5RJF7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Cacna2d4Q5RJF7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.31■■■□□ 2.92
Cacna2d4Q5RJF7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Cacna2d4Q5RJF7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Cacna2d4Q5RJF7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.85■■■□□ 2.85
Cacna2d4Q5RJF7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Cacna2d4Q5RJF7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cacna2d4Q5RJF7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Cacna2d4Q5RJF7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.72■■■□□ 2.83
Cacna2d4Q5RJF7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.58■■■□□ 2.81
Cacna2d4Q5RJF7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Cacna2d4Q5RJF7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Cacna2d4Q5RJF7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Cacna2d4Q5RJF7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.39■■■□□ 2.78
Cacna2d4Q5RJF7 Gm25238-201ENSMUST00000174914 89 ntBASIC32.38■■■□□ 2.77
Cacna2d4Q5RJF7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.35■■■□□ 2.77
Cacna2d4Q5RJF7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Cacna2d4Q5RJF7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Cacna2d4Q5RJF7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Cacna2d4Q5RJF7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Cacna2d4Q5RJF7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Cacna2d4Q5RJF7 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.21■■■□□ 2.75
Cacna2d4Q5RJF7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Cacna2d4Q5RJF7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Cacna2d4Q5RJF7 Gm27325-201ENSMUST00000175467 74 ntBASIC31.98■■■□□ 2.71
Cacna2d4Q5RJF7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cacna2d4Q5RJF7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cacna2d4Q5RJF7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cacna2d4Q5RJF7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.9■■■□□ 2.7
Cacna2d4Q5RJF7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.85■■■□□ 2.69
Cacna2d4Q5RJF7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cacna2d4Q5RJF7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Cacna2d4Q5RJF7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
Cacna2d4Q5RJF7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
Cacna2d4Q5RJF7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Cacna2d4Q5RJF7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.68■■■□□ 2.66
Cacna2d4Q5RJF7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Cacna2d4Q5RJF7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cacna2d4Q5RJF7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cacna2d4Q5RJF7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cacna2d4Q5RJF7 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.53■■■□□ 2.64
Cacna2d4Q5RJF7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Cacna2d4Q5RJF7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Cacna2d4Q5RJF7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.49■■■□□ 2.63
Cacna2d4Q5RJF7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cacna2d4Q5RJF7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Cacna2d4Q5RJF7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.46■■■□□ 2.63
Cacna2d4Q5RJF7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cacna2d4Q5RJF7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.22■■■□□ 2.59
Cacna2d4Q5RJF7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
Cacna2d4Q5RJF7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cacna2d4Q5RJF7 Rab21-202ENSMUST00000218831 843 ntBASIC31.15■■■□□ 2.58
Cacna2d4Q5RJF7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cacna2d4Q5RJF7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cacna2d4Q5RJF7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31■■■□□ 2.55
Cacna2d4Q5RJF7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cacna2d4Q5RJF7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cacna2d4Q5RJF7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.98■■■□□ 2.55
Cacna2d4Q5RJF7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cacna2d4Q5RJF7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Cacna2d4Q5RJF7 Gm25262-201ENSMUST00000174934 133 ntBASIC30.85■■■□□ 2.53
Cacna2d4Q5RJF7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.85■■■□□ 2.53
Cacna2d4Q5RJF7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cacna2d4Q5RJF7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Cacna2d4Q5RJF7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cacna2d4Q5RJF7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cacna2d4Q5RJF7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Cacna2d4Q5RJF7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms