RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Rhox8Q6VSS7 320 aa39.95■■■■□ 3.99
Sh3rf1-201ENSMUST00000034060 Rpgrip1Q9EPQ2 1331 aa38.57■■■■□ 3.77
Sh3rf1-201ENSMUST00000034060 Las1lA2BE28 776 aaKnown RBP37.15■■■■□ 3.54
Sh3rf1-201ENSMUST00000034060 Cngb1E1AZ71 1325 aa37.08■■■■□ 3.53
Sh3rf1-201ENSMUST00000034060 Pelp1Q9DBD5 1123 aaKnown RBP36.3■■■■□ 3.4
Sh3rf1-201ENSMUST00000034060 Ehmt2Q9Z148 1263 aaKnown RBP36.22■■■■□ 3.39
Sh3rf1-201ENSMUST00000034060 Wdr66E9Q743 1299 aa35.84■■■■□ 3.33
Sh3rf1-201ENSMUST00000034060 Zeb1Q64318 1117 aa35.38■■■■□ 3.25
Sh3rf1-201ENSMUST00000034060 CenpbP27790 599 aa35.2■■■■□ 3.23
Sh3rf1-201ENSMUST00000034060 Ccdc136Q3TVA9 1136 aa35.2■■■■□ 3.23
Sh3rf1-201ENSMUST00000034060 Acin1Q9JIX8 1338 aaKnown RBP35.1■■■■□ 3.21
Sh3rf1-201ENSMUST00000034060 Esf1Q3V1V3 845 aaKnown RBP35■■■■□ 3.19
Sh3rf1-201ENSMUST00000034060 Trim41Q5NCC3 630 aa34.95■■■■□ 3.19
Sh3rf1-201ENSMUST00000034060 Ube2uB1AUC4 352 aa34.86■■■■□ 3.17
Sh3rf1-201ENSMUST00000034060 NefmP08553 848 aa34.79■■■■□ 3.16
Sh3rf1-201ENSMUST00000034060 Gab3Q8BSM5 595 aa34.74■■■■□ 3.15
Sh3rf1-201ENSMUST00000034060 Stra8P70278 393 aa34.63■■■■□ 3.13
Sh3rf1-201ENSMUST00000034060 Myt1Q8CFC2 1127 aa34.56■■■■□ 3.12
Sh3rf1-201ENSMUST00000034060 Npm2Q80W85 207 aa34.53■■■■□ 3.12
Sh3rf1-201ENSMUST00000034060 Amer1Q7TS75 1132 aa34.52■■■■□ 3.12
Sh3rf1-201ENSMUST00000034060 NischQ80TM9 1593 aa34.39■■■■□ 3.1
Sh3rf1-201ENSMUST00000034060 Ccdc180J3QNE4 1664 aa34.29■■■■□ 3.08
Sh3rf1-201ENSMUST00000034060 Myt1lP97500 1187 aa34.16■■■■□ 3.06
Sh3rf1-201ENSMUST00000034060 Cdk11bP24788 784 aaKnown RBP33.96■■■■□ 3.03
Sh3rf1-201ENSMUST00000034060 Rtl1Q7M732 1744 aa33.95■■■■□ 3.03
Sh3rf1-201ENSMUST00000034060 HrcG5E8J6 738 aa33.93■■■■□ 3.02
Sh3rf1-201ENSMUST00000034060 Pcgf6Q99NA9 353 aa33.86■■■■□ 3.01
Sh3rf1-201ENSMUST00000034060 UbtfP25976 765 aaKnown RBP33.85■■■■□ 3.01
Sh3rf1-201ENSMUST00000034060 Tnnt3Q9QZ47 272 aa33.83■■■■□ 3.01
Sh3rf1-201ENSMUST00000034060 4930567H17RikQ3V0K5 233 aa33.57■■■□□ 2.97
Sh3rf1-201ENSMUST00000034060 Slc24a1Q91WD8 1130 aa33.54■■■□□ 2.96
Sh3rf1-201ENSMUST00000034060 Nop58Q6DFW4 536 aaKnown RBP33.44■■■□□ 2.94
Sh3rf1-201ENSMUST00000034060 Rtl5Q5DTT4 599 aa33.4■■■□□ 2.94
Sh3rf1-201ENSMUST00000034060 4933416C03RikQ3V063 378 aa33.33■■■□□ 2.93
Sh3rf1-201ENSMUST00000034060 NrdcQ8BHG1 1161 aa33.23■■■□□ 2.91
Sh3rf1-201ENSMUST00000034060 Ttbk1Q6PCN3 1308 aa33.2■■■□□ 2.91
Sh3rf1-201ENSMUST00000034060 Anp32bQ9EST5 272 aaKnown RBP33.19■■■□□ 2.9
Sh3rf1-201ENSMUST00000034060 NeflP08551 543 aa33.13■■■□□ 2.89
Sh3rf1-201ENSMUST00000034060 Supt5hO55201 1082 aaKnown RBP32.99■■■□□ 2.87
Sh3rf1-201ENSMUST00000034060 NclP09405 707 aaKnown RBP32.92■■■□□ 2.86
Sh3rf1-201ENSMUST00000034060 TonslQ6NZL6 1363 aa32.86■■■□□ 2.85
Sh3rf1-201ENSMUST00000034060 Eif5bQ05D44 1216 aaKnown RBP32.72■■■□□ 2.83
Sh3rf1-201ENSMUST00000034060 Fam50aQ9WV03 339 aaKnown RBP32.66■■■□□ 2.82
Sh3rf1-201ENSMUST00000034060 DiexfQ8BTT6 772 aaKnown RBP32.59■■■□□ 2.81
Sh3rf1-201ENSMUST00000034060 Anp32aO35381 247 aa32.54■■■□□ 2.8
Sh3rf1-201ENSMUST00000034060 ClspnQ80YR7 1315 aa32.47■■■□□ 2.79
Sh3rf1-201ENSMUST00000034060 Mier1Q5UAK0 511 aa32.46■■■□□ 2.79
Sh3rf1-201ENSMUST00000034060 Neurod1Q60867 357 aa32.46■■■□□ 2.79
Sh3rf1-201ENSMUST00000034060 Il27Q8K3I6 234 aa32.43■■■□□ 2.78
Sh3rf1-201ENSMUST00000034060 Ppargc1bQ8VHJ7 1014 aa32.34■■■□□ 2.77
Sh3rf1-201ENSMUST00000034060 Ap3b1Q9Z1T1 1105 aa32.34■■■□□ 2.77
Sh3rf1-201ENSMUST00000034060 Zcchc6Q5BLK4 1491 aaKnown RBP32.3■■■□□ 2.76
Sh3rf1-201ENSMUST00000034060 Os9Q8K2C7 672 aa32.17■■■□□ 2.74
Sh3rf1-201ENSMUST00000034060 Anks4bQ8K3X6 423 aa32.09■■■□□ 2.73
Sh3rf1-201ENSMUST00000034060 DaxxO35613 739 aa32.01■■■□□ 2.71
Sh3rf1-201ENSMUST00000034060 Aplp2Q06335 707 aa31.99■■■□□ 2.71
Sh3rf1-201ENSMUST00000034060 Abcc9P70170 1546 aa31.94■■■□□ 2.7
Sh3rf1-201ENSMUST00000034060 Dcaf1Q80TR8 1506 aa31.88■■■□□ 2.69
Sh3rf1-201ENSMUST00000034060 Csrnp3P59055 597 aa31.66■■■□□ 2.66
Sh3rf1-201ENSMUST00000034060 Sall2Q9QX96 1004 aa31.61■■■□□ 2.65
Sh3rf1-201ENSMUST00000034060 Ccdc9Q8VC31 543 aaKnown RBP31.57■■■□□ 2.64
Sh3rf1-201ENSMUST00000034060 Plekhg3Q4VAC9 1341 aa31.55■■■□□ 2.64
Sh3rf1-201ENSMUST00000034060 Ccer2J3QPU5 274 aa31.46■■■□□ 2.63
Sh3rf1-201ENSMUST00000034060 Hdac5Q9Z2V6 1113 aa31.45■■■□□ 2.63
Sh3rf1-201ENSMUST00000034060 Calr4Q3TQS0 420 aa31.43■■■□□ 2.62
Sh3rf1-201ENSMUST00000034060 Cep164Q5DU05 1446 aa31.43■■■□□ 2.62
Sh3rf1-201ENSMUST00000034060 Upf2A2AT37 1269 aaKnown RBP31.42■■■□□ 2.62
Sh3rf1-201ENSMUST00000034060 Nlrp6Q91WS2 869 aa31.41■■■□□ 2.62
Sh3rf1-201ENSMUST00000034060 Lmod2Q3UHZ5 550 aa31.39■■■□□ 2.62
Sh3rf1-201ENSMUST00000034060 Gm38655A0A286YDK6 273 aa31.34■■■□□ 2.61
Sh3rf1-201ENSMUST00000034060 Ppp4r2Q0VGB7 417 aa31.25■■■□□ 2.59
Sh3rf1-201ENSMUST00000034060 Clip1Q922J3 1391 aa31.22■■■□□ 2.59
Sh3rf1-201ENSMUST00000034060 Npm1Q61937 292 aaKnown RBP31.21■■■□□ 2.59
Sh3rf1-201ENSMUST00000034060 Hsp90aa1P07901 733 aaKnown RBP31.2■■■□□ 2.59
Sh3rf1-201ENSMUST00000034060 Wdr43Q6ZQL4 677 aaKnown RBP31.19■■■□□ 2.58
Sh3rf1-201ENSMUST00000034060 Mapk8ip2Q9ERE9 830 aa31.14■■■□□ 2.58
Sh3rf1-201ENSMUST00000034060 Brd4Q9ESU6 1400 aaKnown RBP31.13■■■□□ 2.57
Sh3rf1-201ENSMUST00000034060 Hnrnpul2Q00PI9 745 aaKnown RBP31.12■■■□□ 2.57
Sh3rf1-201ENSMUST00000034060 Eid3Q3V124 375 aa31.1■■■□□ 2.57
Sh3rf1-201ENSMUST00000034060 Polr3glQ8R0C0 218 aa31.05■■■□□ 2.56
Sh3rf1-201ENSMUST00000034060 Zbtb7cQ8VCZ7 619 aa31.05■■■□□ 2.56
Sh3rf1-201ENSMUST00000034060 Gm35339A0A140LHH9 1649 aa31.03■■■□□ 2.56
Sh3rf1-201ENSMUST00000034060 Abcc8B2RUS7 1588 aa30.98■■■□□ 2.55
Sh3rf1-201ENSMUST00000034060 Ythdc1E9Q5K9 736 aaKnown RBP30.98■■■□□ 2.55
Sh3rf1-201ENSMUST00000034060 ArxO35085 564 aa30.95■■■□□ 2.55
Sh3rf1-201ENSMUST00000034060 Zbtb4Q5F293 982 aa30.86■■■□□ 2.53
Sh3rf1-201ENSMUST00000034060 Erich6D3Z6S9 713 aa30.83■■■□□ 2.53
Sh3rf1-201ENSMUST00000034060 CatipB9EKE5 520 aa30.83■■■□□ 2.53
Sh3rf1-201ENSMUST00000034060 1700123L14RikQ3V2K7 440 aa30.79■■■□□ 2.52
Sh3rf1-201ENSMUST00000034060 Mrs2Q5NCE8 434 aa30.79■■■□□ 2.52
Sh3rf1-201ENSMUST00000034060 Gm13697A2AK42 830 aa30.78■■■□□ 2.52
Sh3rf1-201ENSMUST00000034060 Chic1Q8CBW7 227 aa30.72■■■□□ 2.51
Sh3rf1-201ENSMUST00000034060 Trim44Q9QXA7 346 aa30.72■■■□□ 2.51
Sh3rf1-201ENSMUST00000034060 Atp1b4Q99ME6 356 aa30.68■■■□□ 2.5
Sh3rf1-201ENSMUST00000034060 Ccdc27Q3V036 639 aa30.65■■■□□ 2.5
Sh3rf1-201ENSMUST00000034060 Fam71e1A1L3C1 212 aa30.63■■■□□ 2.49
Sh3rf1-201ENSMUST00000034060 CanxP35564 591 aaKnown RBP30.6■■■□□ 2.49
Sh3rf1-201ENSMUST00000034060 Rad21Q61550 635 aaKnown RBP30.58■■■□□ 2.49
Sh3rf1-201ENSMUST00000034060 Prdm10Q3UTQ7 1184 aa30.58■■■□□ 2.49
Sh3rf1-201ENSMUST00000034060 DekQ7TNV0 380 aaKnown RBP30.57■■■□□ 2.48
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms