RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Rhox8Q6VSS7 320 aa39,95■■■■□ 3,99
Sh3rf1-201ENSMUST00000034060 Rpgrip1Q9EPQ2 1331 aa38,57■■■■□ 3,77
Sh3rf1-201ENSMUST00000034060 Las1lA2BE28 776 aaKnown RBP37,15■■■■□ 3,54
Sh3rf1-201ENSMUST00000034060 Cngb1E1AZ71 1325 aa37,08■■■■□ 3,53
Sh3rf1-201ENSMUST00000034060 Pelp1Q9DBD5 1123 aaKnown RBP36,3■■■■□ 3,4
Sh3rf1-201ENSMUST00000034060 Ehmt2Q9Z148 1263 aaKnown RBP36,22■■■■□ 3,39
Sh3rf1-201ENSMUST00000034060 Wdr66E9Q743 1299 aa35,84■■■■□ 3,33
Sh3rf1-201ENSMUST00000034060 Zeb1Q64318 1117 aa35,38■■■■□ 3,25
Sh3rf1-201ENSMUST00000034060 CenpbP27790 599 aa35,2■■■■□ 3,23
Sh3rf1-201ENSMUST00000034060 Ccdc136Q3TVA9 1136 aa35,2■■■■□ 3,23
Sh3rf1-201ENSMUST00000034060 Acin1Q9JIX8 1338 aaKnown RBP35,1■■■■□ 3,21
Sh3rf1-201ENSMUST00000034060 Esf1Q3V1V3 845 aaKnown RBP35■■■■□ 3,19
Sh3rf1-201ENSMUST00000034060 Trim41Q5NCC3 630 aa34,95■■■■□ 3,19
Sh3rf1-201ENSMUST00000034060 Ube2uB1AUC4 352 aa34,86■■■■□ 3,17
Sh3rf1-201ENSMUST00000034060 NefmP08553 848 aa34,79■■■■□ 3,16
Sh3rf1-201ENSMUST00000034060 Gab3Q8BSM5 595 aa34,74■■■■□ 3,15
Sh3rf1-201ENSMUST00000034060 Stra8P70278 393 aa34,63■■■■□ 3,13
Sh3rf1-201ENSMUST00000034060 Myt1Q8CFC2 1127 aa34,56■■■■□ 3,12
Sh3rf1-201ENSMUST00000034060 Npm2Q80W85 207 aa34,53■■■■□ 3,12
Sh3rf1-201ENSMUST00000034060 Amer1Q7TS75 1132 aa34,52■■■■□ 3,12
Sh3rf1-201ENSMUST00000034060 NischQ80TM9 1593 aa34,39■■■■□ 3,1
Sh3rf1-201ENSMUST00000034060 Ccdc180J3QNE4 1664 aa34,29■■■■□ 3,08
Sh3rf1-201ENSMUST00000034060 Myt1lP97500 1187 aa34,16■■■■□ 3,06
Sh3rf1-201ENSMUST00000034060 Cdk11bP24788 784 aaKnown RBP33,96■■■■□ 3,03
Sh3rf1-201ENSMUST00000034060 Rtl1Q7M732 1744 aa33,95■■■■□ 3,03
Sh3rf1-201ENSMUST00000034060 HrcG5E8J6 738 aa33,93■■■■□ 3,02
Sh3rf1-201ENSMUST00000034060 Pcgf6Q99NA9 353 aa33,86■■■■□ 3,01
Sh3rf1-201ENSMUST00000034060 UbtfP25976 765 aaKnown RBP33,85■■■■□ 3,01
Sh3rf1-201ENSMUST00000034060 Tnnt3Q9QZ47 272 aa33,83■■■■□ 3,01
Sh3rf1-201ENSMUST00000034060 4930567H17RikQ3V0K5 233 aa33,57■■■□□ 2,97
Sh3rf1-201ENSMUST00000034060 Slc24a1Q91WD8 1130 aa33,54■■■□□ 2,96
Sh3rf1-201ENSMUST00000034060 Nop58Q6DFW4 536 aaKnown RBP33,44■■■□□ 2,94
Sh3rf1-201ENSMUST00000034060 Rtl5Q5DTT4 599 aa33,4■■■□□ 2,94
Sh3rf1-201ENSMUST00000034060 4933416C03RikQ3V063 378 aa33,33■■■□□ 2,93
Sh3rf1-201ENSMUST00000034060 NrdcQ8BHG1 1161 aa33,23■■■□□ 2,91
Sh3rf1-201ENSMUST00000034060 Ttbk1Q6PCN3 1308 aa33,2■■■□□ 2,91
Sh3rf1-201ENSMUST00000034060 Anp32bQ9EST5 272 aaKnown RBP33,19■■■□□ 2,9
Sh3rf1-201ENSMUST00000034060 NeflP08551 543 aa33,13■■■□□ 2,89
Sh3rf1-201ENSMUST00000034060 Supt5hO55201 1082 aaKnown RBP32,99■■■□□ 2,87
Sh3rf1-201ENSMUST00000034060 NclP09405 707 aaKnown RBP32,92■■■□□ 2,86
Sh3rf1-201ENSMUST00000034060 TonslQ6NZL6 1363 aa32,86■■■□□ 2,85
Sh3rf1-201ENSMUST00000034060 Eif5bQ05D44 1216 aaKnown RBP32,72■■■□□ 2,83
Sh3rf1-201ENSMUST00000034060 Fam50aQ9WV03 339 aaKnown RBP32,66■■■□□ 2,82
Sh3rf1-201ENSMUST00000034060 DiexfQ8BTT6 772 aaKnown RBP32,59■■■□□ 2,81
Sh3rf1-201ENSMUST00000034060 Anp32aO35381 247 aa32,54■■■□□ 2,8
Sh3rf1-201ENSMUST00000034060 ClspnQ80YR7 1315 aa32,47■■■□□ 2,79
Sh3rf1-201ENSMUST00000034060 Mier1Q5UAK0 511 aa32,46■■■□□ 2,79
Sh3rf1-201ENSMUST00000034060 Neurod1Q60867 357 aa32,46■■■□□ 2,79
Sh3rf1-201ENSMUST00000034060 Il27Q8K3I6 234 aa32,43■■■□□ 2,78
Sh3rf1-201ENSMUST00000034060 Ppargc1bQ8VHJ7 1014 aa32,34■■■□□ 2,77
Sh3rf1-201ENSMUST00000034060 Ap3b1Q9Z1T1 1105 aa32,34■■■□□ 2,77
Sh3rf1-201ENSMUST00000034060 Zcchc6Q5BLK4 1491 aaKnown RBP32,3■■■□□ 2,76
Sh3rf1-201ENSMUST00000034060 Os9Q8K2C7 672 aa32,17■■■□□ 2,74
Sh3rf1-201ENSMUST00000034060 Anks4bQ8K3X6 423 aa32,09■■■□□ 2,73
Sh3rf1-201ENSMUST00000034060 DaxxO35613 739 aa32,01■■■□□ 2,71
Sh3rf1-201ENSMUST00000034060 Aplp2Q06335 707 aa31,99■■■□□ 2,71
Sh3rf1-201ENSMUST00000034060 Abcc9P70170 1546 aa31,94■■■□□ 2,7
Sh3rf1-201ENSMUST00000034060 Dcaf1Q80TR8 1506 aa31,88■■■□□ 2,69
Sh3rf1-201ENSMUST00000034060 Csrnp3P59055 597 aa31,66■■■□□ 2,66
Sh3rf1-201ENSMUST00000034060 Sall2Q9QX96 1004 aa31,61■■■□□ 2,65
Sh3rf1-201ENSMUST00000034060 Ccdc9Q8VC31 543 aaKnown RBP31,57■■■□□ 2,64
Sh3rf1-201ENSMUST00000034060 Plekhg3Q4VAC9 1341 aa31,55■■■□□ 2,64
Sh3rf1-201ENSMUST00000034060 Ccer2J3QPU5 274 aa31,46■■■□□ 2,63
Sh3rf1-201ENSMUST00000034060 Hdac5Q9Z2V6 1113 aa31,45■■■□□ 2,63
Sh3rf1-201ENSMUST00000034060 Calr4Q3TQS0 420 aa31,43■■■□□ 2,62
Sh3rf1-201ENSMUST00000034060 Cep164Q5DU05 1446 aa31,43■■■□□ 2,62
Sh3rf1-201ENSMUST00000034060 Upf2A2AT37 1269 aaKnown RBP31,42■■■□□ 2,62
Sh3rf1-201ENSMUST00000034060 Nlrp6Q91WS2 869 aa31,41■■■□□ 2,62
Sh3rf1-201ENSMUST00000034060 Lmod2Q3UHZ5 550 aa31,39■■■□□ 2,62
Sh3rf1-201ENSMUST00000034060 Gm38655A0A286YDK6 273 aa31,34■■■□□ 2,61
Sh3rf1-201ENSMUST00000034060 Ppp4r2Q0VGB7 417 aa31,25■■■□□ 2,59
Sh3rf1-201ENSMUST00000034060 Clip1Q922J3 1391 aa31,22■■■□□ 2,59
Sh3rf1-201ENSMUST00000034060 Npm1Q61937 292 aaKnown RBP31,21■■■□□ 2,59
Sh3rf1-201ENSMUST00000034060 Hsp90aa1P07901 733 aaKnown RBP31,2■■■□□ 2,59
Sh3rf1-201ENSMUST00000034060 Wdr43Q6ZQL4 677 aaKnown RBP31,19■■■□□ 2,58
Sh3rf1-201ENSMUST00000034060 Mapk8ip2Q9ERE9 830 aa31,14■■■□□ 2,58
Sh3rf1-201ENSMUST00000034060 Brd4Q9ESU6 1400 aaKnown RBP31,13■■■□□ 2,57
Sh3rf1-201ENSMUST00000034060 Hnrnpul2Q00PI9 745 aaKnown RBP31,12■■■□□ 2,57
Sh3rf1-201ENSMUST00000034060 Eid3Q3V124 375 aa31,1■■■□□ 2,57
Sh3rf1-201ENSMUST00000034060 Polr3glQ8R0C0 218 aa31,05■■■□□ 2,56
Sh3rf1-201ENSMUST00000034060 Zbtb7cQ8VCZ7 619 aa31,05■■■□□ 2,56
Sh3rf1-201ENSMUST00000034060 Gm35339A0A140LHH9 1649 aa31,03■■■□□ 2,56
Sh3rf1-201ENSMUST00000034060 Abcc8B2RUS7 1588 aa30,98■■■□□ 2,55
Sh3rf1-201ENSMUST00000034060 Ythdc1E9Q5K9 736 aaKnown RBP30,98■■■□□ 2,55
Sh3rf1-201ENSMUST00000034060 ArxO35085 564 aa30,95■■■□□ 2,55
Sh3rf1-201ENSMUST00000034060 Zbtb4Q5F293 982 aa30,86■■■□□ 2,53
Sh3rf1-201ENSMUST00000034060 Erich6D3Z6S9 713 aa30,83■■■□□ 2,53
Sh3rf1-201ENSMUST00000034060 CatipB9EKE5 520 aa30,83■■■□□ 2,53
Sh3rf1-201ENSMUST00000034060 1700123L14RikQ3V2K7 440 aa30,79■■■□□ 2,52
Sh3rf1-201ENSMUST00000034060 Mrs2Q5NCE8 434 aa30,79■■■□□ 2,52
Sh3rf1-201ENSMUST00000034060 Gm13697A2AK42 830 aa30,78■■■□□ 2,52
Sh3rf1-201ENSMUST00000034060 Chic1Q8CBW7 227 aa30,72■■■□□ 2,51
Sh3rf1-201ENSMUST00000034060 Trim44Q9QXA7 346 aa30,72■■■□□ 2,51
Sh3rf1-201ENSMUST00000034060 Atp1b4Q99ME6 356 aa30,68■■■□□ 2,5
Sh3rf1-201ENSMUST00000034060 Ccdc27Q3V036 639 aa30,65■■■□□ 2,5
Sh3rf1-201ENSMUST00000034060 Fam71e1A1L3C1 212 aa30,63■■■□□ 2,49
Sh3rf1-201ENSMUST00000034060 CanxP35564 591 aaKnown RBP30,6■■■□□ 2,49
Sh3rf1-201ENSMUST00000034060 Rad21Q61550 635 aaKnown RBP30,58■■■□□ 2,49
Sh3rf1-201ENSMUST00000034060 Prdm10Q3UTQ7 1184 aa30,58■■■□□ 2,49
Sh3rf1-201ENSMUST00000034060 DekQ7TNV0 380 aaKnown RBP30,57■■■□□ 2,48
Retrieved 100 of 22,080 RNA–protein pairs in 9,4 ms