RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W PUP1P25043 261 aa2.06□□□□□ -2.08
RTP1YMR185W MSH1P25846 959 aa2.06□□□□□ -2.08
RTP1YMR185W HSP104P31539 908 aaKnown RBP2.06□□□□□ -2.08
RTP1YMR185W PXL1P36166 706 aa2.06□□□□□ -2.08
RTP1YMR185W LEM3P42838 414 aa2.06□□□□□ -2.08
RTP1YMR185W MLC1P53141 149 aa2.06□□□□□ -2.08
RTP1YMR185W GUP1P53154 560 aa2.06□□□□□ -2.08
RTP1YMR185W MAL13P53338 473 aa2.06□□□□□ -2.08
RTP1YMR185W MRS2Q01926 470 aa2.06□□□□□ -2.08
RTP1YMR185W GIC2Q06648 383 aa2.06□□□□□ -2.08
RTP1YMR185W SFI1Q12369 946 aa2.06□□□□□ -2.08
RTP1YMR185W SAC3P46674 1301 aa2.06□□□□□ -2.08
RTP1YMR185W RPB10P22139 70 aa2.06□□□□□ -2.08
RTP1YMR185W WHI3P34761 661 aaKnown RBP2.06□□□□□ -2.08
RTP1YMR185W YKL222CP35995 705 aa2.06□□□□□ -2.08
RTP1YMR185W OSH3P38713 996 aaKnown RBP2.06□□□□□ -2.08
RTP1YMR185W FET4P40988 552 aa2.06□□□□□ -2.08
RTP1YMR185W TIM50Q02776 476 aa2.06□□□□□ -2.08
RTP1YMR185W YML083CQ04526 418 aa2.06□□□□□ -2.08
RTP1YMR185W PNP1Q05788 311 aa2.06□□□□□ -2.08
RTP1YMR185W COG4Q06096 861 aa2.06□□□□□ -2.08
RTP1YMR185W FPR4Q06205 392 aaPredicted RBP2.06□□□□□ -2.08
RTP1YMR185W EMG1Q06287 252 aaKnown RBP2.06□□□□□ -2.08
RTP1YMR185W MAG2Q06436 670 aaKnown RBP2.06□□□□□ -2.08
RTP1YMR185W NCB2Q92317 146 aa2.06□□□□□ -2.08
RTP1YMR185W SWI1P09547 1314 aa2.06□□□□□ -2.08
RTP1YMR185W OPI1P21957 404 aa2.05□□□□□ -2.08
RTP1YMR185W RRP1P35178 278 aaPredicted RBP2.05□□□□□ -2.08
RTP1YMR185W UBP12P39538 1254 aa2.05□□□□□ -2.08
RTP1YMR185W CTH1P47976 325 aa2.05□□□□□ -2.08
RTP1YMR185W YGL242CP53066 181 aa2.05□□□□□ -2.08
RTP1YMR185W ALD3P54114 506 aa2.05□□□□□ -2.08
RTP1YMR185W RNT1Q02555 471 aa2.05□□□□□ -2.08
RTP1YMR185W YLR407WQ06070 228 aa2.05□□□□□ -2.08
RTP1YMR185W FUR4P05316 633 aaKnown RBP2.05□□□□□ -2.08
RTP1YMR185W MATALPHA2P0CY08 210 aa2.05□□□□□ -2.08
RTP1YMR185W HMLALPHA2P0CY09 210 aa2.05□□□□□ -2.08
RTP1YMR185W PGI1P12709 554 aaKnown RBP2.05□□□□□ -2.08
RTP1YMR185W RAD4P14736 754 aa2.05□□□□□ -2.08
RTP1YMR185W ERS1P17261 260 aa2.05□□□□□ -2.08
RTP1YMR185W YEL043WP32618 956 aa2.05□□□□□ -2.08
RTP1YMR185W DID4P36108 232 aa2.05□□□□□ -2.08
RTP1YMR185W VPS8P39702 1274 aa2.05□□□□□ -2.08
RTP1YMR185W ALF1P53904 254 aa2.05□□□□□ -2.08
RTP1YMR185W SOG2Q08817 791 aa2.05□□□□□ -2.08
RTP1YMR185W RSF2P46974 1380 aa2.05□□□□□ -2.08
RTP1YMR185W CPA2P03965 1118 aaKnown RBP2.04□□□□□ -2.08
RTP1YMR185W RNQ1P25367 405 aa2.04□□□□□ -2.08
RTP1YMR185W SMC1P32908 1225 aa2.04□□□□□ -2.08
RTP1YMR185W YKT6P36015 200 aaKnown RBP2.04□□□□□ -2.08
RTP1YMR185W TFA2P36145 328 aa2.04□□□□□ -2.08
RTP1YMR185W MAL33P38157 468 aa2.04□□□□□ -2.08
RTP1YMR185W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
RTP1YMR185W MRPS35P53292 345 aa2.04□□□□□ -2.08
RTP1YMR185W SLM3Q12093 417 aa2.04□□□□□ -2.08
RTP1YMR185W RDS1P25611 832 aa2.04□□□□□ -2.08
RTP1YMR185W DPB3P27344 201 aa2.04□□□□□ -2.08
RTP1YMR185W GSY2P27472 705 aa2.04□□□□□ -2.08
RTP1YMR185W CCC2P38995 1004 aa2.04□□□□□ -2.08
RTP1YMR185W RAD26P40352 1085 aa2.04□□□□□ -2.08
RTP1YMR185W MMM1P41800 426 aa2.04□□□□□ -2.08
RTP1YMR185W YJR124CP47159 448 aa2.04□□□□□ -2.08
RTP1YMR185W CTF18P49956 741 aa2.04□□□□□ -2.08
RTP1YMR185W SSL2Q00578 843 aa2.04□□□□□ -2.08
RTP1YMR185W SML1Q04964 104 aa2.04□□□□□ -2.08
RTP1YMR185W YCG1Q06680 1035 aa2.04□□□□□ -2.08
RTP1YMR185W INP54Q08227 384 aaKnown RBP2.04□□□□□ -2.08
RTP1YMR185W YOR223WQ12015 292 aa2.04□□□□□ -2.08
RTP1YMR185W GPA1P08539 472 aa2.04□□□□□ -2.08
RTP1YMR185W CBP3P21560 335 aa2.04□□□□□ -2.08
RTP1YMR185W DEP1P31385 405 aa2.04□□□□□ -2.08
RTP1YMR185W MUD2P36084 527 aaKnown RBP2.04□□□□□ -2.08
RTP1YMR185W KTR3P38130 404 aaPredicted RBP2.04□□□□□ -2.08
RTP1YMR185W BIO5P53744 561 aaKnown RBP2.04□□□□□ -2.08
RTP1YMR185W VTC3Q02725 835 aa2.04□□□□□ -2.08
RTP1YMR185W GLT1Q12680 2145 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W SES1P07284 462 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W LPD1P09624 499 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W PHO13P19881 312 aa2.03□□□□□ -2.08
RTP1YMR185W GAS1P22146 559 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W MCM3P24279 971 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W ASF1P32447 279 aa2.03□□□□□ -2.08
RTP1YMR185W GPT2P36148 743 aa2.03□□□□□ -2.08
RTP1YMR185W YKE2P52553 114 aa2.03□□□□□ -2.08
RTP1YMR185W YGR122WP53272 402 aa2.03□□□□□ -2.08
RTP1YMR185W HAS1Q03532 505 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W SGD1Q06132 899 aa2.03□□□□□ -2.08
RTP1YMR185W YLL054CQ12244 843 aa2.03□□□□□ -2.08
RTP1YMR185W TIF6Q12522 245 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W FIG2P25653 1609 aa2.03□□□□□ -2.08
RTP1YMR185W GCD1P09032 578 aaPredicted RBP2.03□□□□□ -2.08
RTP1YMR185W SRP54P20424 541 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W SEG2P34250 1132 aa2.03□□□□□ -2.08
RTP1YMR185W IRS4P36115 615 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W MED8P38304 223 aa2.03□□□□□ -2.08
RTP1YMR185W RTT107P38850 1070 aa2.03□□□□□ -2.08
RTP1YMR185W VPS41P38959 992 aa2.03□□□□□ -2.08
RTP1YMR185W YER130CP39959 443 aa2.03□□□□□ -2.08
RTP1YMR185W BUD16P39988 312 aa2.03□□□□□ -2.08
RTP1YMR185W NUG1P40010 520 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms