RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	SQT1	P35184	431 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	RFT1	P38206	574 aa	Predicted RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	UBP6	P43593	499 aa	Known RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	SGM1	P47166	707 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	RSM28	Q03430	361 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	YPR172W	Q06608	200 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	TFB4	Q12004	338 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	HIS3	P06633	220 aa		5.13	□□□□□ -1.59
CLF1	YLR117C	PET494	P07390	489 aa	Predicted RBP	5.13	□□□□□ -1.59
CLF1	YLR117C	RPC34	P32910	317 aa		5.13	□□□□□ -1.59
CLF1	YLR117C	FES1	P38260	290 aa		5.13	□□□□□ -1.59
CLF1	YLR117C	GGA2	P38817	585 aa	Known RBP	5.13	□□□□□ -1.59
CLF1	YLR117C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
CLF1	YLR117C	STB2	P46679	850 aa		5.13	□□□□□ -1.59
CLF1	YLR117C	NOP15	P53927	220 aa	Predicted RBP	5.13	□□□□□ -1.59
CLF1	YLR117C	CIK1	Q01649	594 aa		5.13	□□□□□ -1.59
CLF1	YLR117C	ATP25	Q03153	612 aa		5.13	□□□□□ -1.59
CLF1	YLR117C	DCS2	Q12123	353 aa		5.13	□□□□□ -1.59
CLF1	YLR117C	RIB2	Q12362	591 aa	Known RBP	5.13	□□□□□ -1.59
CLF1	YLR117C	RTP1	Q12751	981 aa		5.13	□□□□□ -1.59
CLF1	YLR117C	REP1	P03871	373 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	ARG4	P04076	463 aa	Predicted RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	SSC1	P0CS90	654 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	RSR1	P13856	272 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	VPS1	P21576	704 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	SEC15	P22224	910 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	PAP1	P29468	568 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	VPH2	P32341	215 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	NIP1	P32497	812 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	YKL091C	P33324	310 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	YBR242W	P38331	238 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	EFM4	P40516	257 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	HOP2	P53187	214 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	YGR266W	P53326	701 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	PKH1	Q03407	766 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	ALR1	Q08269	859 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	TAF10	Q12030	206 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	VIK1	Q12045	647 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
CLF1	YLR117C	YRF1-2	P40105	1681 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	ENO1	P00924	437 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	PIF1	P07271	859 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	THR1	P17423	357 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	REC107	P21651	314 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	BUD23	P25627	275 aa	Predicted RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	PYC2	P32327	1180 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	MVD1	P32377	396 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	SMY2	P32909	740 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	OCT1	P35999	772 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	MUM2	P38236	366 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	SPP381	P38282	291 aa	Predicted RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	BRL1	P38770	471 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	YHB1	P39676	399 aa	Known RBP	5.12	□□□□□ -1.59
CLF1	YLR117C	ATG3	P40344	310 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	SPO22	P40511	975 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	VNX1	P42839	908 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	BRO1	P48582	844 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	DSD1	P53095	428 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	VPS16	Q03308	798 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	HFD1	Q04458	532 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	YPQ2	Q06328	317 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	NSE1	Q07913	336 aa		5.12	□□□□□ -1.59
CLF1	YLR117C	STE6	P12866	1290 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	SNA3	P14359	133 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	KIP1	P28742	1111 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	SIN4	P32259	974 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	MRE11	P32829	692 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	COY1	P34237	679 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	HCS1	P34243	683 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	UTP11	P34247	250 aa	Predicted RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	OAF3	P36023	863 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	YHL017W	P38745	532 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	PEX18	P38855	283 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	SSP1	P38871	571 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	SDS3	P40505	327 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	POL31	P46957	487 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	JJJ2	P46997	583 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	MCM6	P53091	1017 aa	Known RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	ERG5	P54781	538 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	NGL3	Q03210	505 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	DML1	Q03652	475 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	TAF9	Q05027	157 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	SCM3	Q12334	223 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	RPB2	P08518	1224 aa	Known RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	HMG1	P12683	1054 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	OSM1	P21375	501 aa	Known RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	SEC65	P29478	273 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	MCM4	P30665	933 aa	Known RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	SLA2	P33338	968 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	LAS1	P36146	502 aa	Predicted RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	YBR062C	P38239	180 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	TIF4631	P39935	952 aa	Known RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	IES2	P40154	320 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	LAM5	P43560	674 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	YGL176C	P46945	554 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	RAT1	Q02792	1006 aa	Known RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	SSQ1	Q05931	657 aa	Predicted RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	YLR257W	Q06146	321 aa	Known RBP	5.11	□□□□□ -1.59
CLF1	YLR117C	ATG17	Q06410	417 aa		5.11	□□□□□ -1.59
CLF1	YLR117C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms