RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C CDC15P27636 974 aa6.32□□□□□ -1.4
SSK1YLR006C KIP2P28743 706 aa6.32□□□□□ -1.4
SSK1YLR006C YKT6P36015 200 aaKnown RBP6.32□□□□□ -1.4
SSK1YLR006C IRR1P40541 1150 aa6.32□□□□□ -1.4
SSK1YLR006C SAP185P40856 1058 aa6.32□□□□□ -1.4
SSK1YLR006C VTC2P43585 828 aa6.32□□□□□ -1.4
SSK1YLR006C SPC105P53148 917 aa6.32□□□□□ -1.4
SSK1YLR006C ALF1P53904 254 aa6.32□□□□□ -1.4
SSK1YLR006C ECM23Q02710 187 aa6.32□□□□□ -1.4
SSK1YLR006C RAD33Q04231 177 aa6.32□□□□□ -1.4
SSK1YLR006C YLH47Q06493 454 aa6.32□□□□□ -1.4
SSK1YLR006C LAM4P38800 1345 aa6.32□□□□□ -1.4
SSK1YLR006C HXK1P04806 485 aaKnown RBP6.31□□□□□ -1.4
SSK1YLR006C RDS2P19541 446 aaKnown RBP6.31□□□□□ -1.4
SSK1YLR006C DPH2P32461 534 aa6.31□□□□□ -1.4
SSK1YLR006C RIC1P40395 1056 aa6.31□□□□□ -1.4
SSK1YLR006C NIT1P40447 199 aa6.31□□□□□ -1.4
SSK1YLR006C ENP2P48234 707 aaKnown RBP6.31□□□□□ -1.4
SSK1YLR006C KEL2P50090 882 aa6.31□□□□□ -1.4
SSK1YLR006C YNL034WP53963 612 aa6.31□□□□□ -1.4
SSK1YLR006C YNL018CP53976 612 aa6.31□□□□□ -1.4
SSK1YLR006C VPS60Q03390 229 aa6.31□□□□□ -1.4
SSK1YLR006C YLR407WQ06070 228 aa6.31□□□□□ -1.4
SSK1YLR006C YLR326WQ06170 240 aaKnown RBP6.31□□□□□ -1.4
SSK1YLR006C MRPL25P23369 157 aa6.31□□□□□ -1.4
SSK1YLR006C MCM4P30665 933 aaKnown RBP6.31□□□□□ -1.4
SSK1YLR006C SSH4P32343 579 aa6.31□□□□□ -1.4
SSK1YLR006C NUP120P35729 1037 aa6.31□□□□□ -1.4
SSK1YLR006C UBP10P53874 792 aaPredicted RBP6.31□□□□□ -1.4
SSK1YLR006C MCD1Q12158 566 aa6.31□□□□□ -1.4
SSK1YLR006C PHM7Q12252 991 aa6.31□□□□□ -1.4
SSK1YLR006C NYV1Q12255 253 aa6.31□□□□□ -1.4
SSK1YLR006C ADR1P07248 1323 aa6.3□□□□□ -1.4
SSK1YLR006C PFK2P16862 959 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
SSK1YLR006C RRP43P25359 394 aaPredicted RBP6.3□□□□□ -1.4
SSK1YLR006C SMY2P32909 740 aaKnown RBP6.3□□□□□ -1.4
SSK1YLR006C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
SSK1YLR006C MAD1P40957 749 aa6.3□□□□□ -1.4
SSK1YLR006C YGR130CP53278 816 aa6.3□□□□□ -1.4
SSK1YLR006C ERO1Q03103 563 aa6.3□□□□□ -1.4
SSK1YLR006C SPP382Q06411 708 aaPredicted RBP6.3□□□□□ -1.4
SSK1YLR006C ENV9Q08651 330 aa6.3□□□□□ -1.4
SSK1YLR006C COBP00163 385 aa6.29□□□□□ -1.4
SSK1YLR006C APA1P16550 321 aaKnown RBP6.29□□□□□ -1.4
SSK1YLR006C HNM1P19807 563 aa6.29□□□□□ -1.4
SSK1YLR006C PSY4P38193 441 aa6.29□□□□□ -1.4
SSK1YLR006C CIN4P39110 191 aa6.29□□□□□ -1.4
SSK1YLR006C TFG2P41896 400 aaPredicted RBP6.29□□□□□ -1.4
SSK1YLR006C VTC4P47075 721 aa6.29□□□□□ -1.4
SSK1YLR006C ATP22P50273 684 aaPredicted RBP6.29□□□□□ -1.4
SSK1YLR006C SWA2Q06677 668 aa6.29□□□□□ -1.4
SSK1YLR006C REH1Q06709 432 aa6.29□□□□□ -1.4
SSK1YLR006C SDH5Q08230 162 aa6.29□□□□□ -1.4
SSK1YLR006C PCL8Q08966 492 aa6.29□□□□□ -1.4
SSK1YLR006C APL4Q12028 832 aa6.29□□□□□ -1.4
SSK1YLR006C MPD2Q99316 277 aa6.29□□□□□ -1.4
SSK1YLR006C ERR1P0CX10 437 aa6.29□□□□□ -1.4
SSK1YLR006C ERR2P0CX11 437 aa6.29□□□□□ -1.4
SSK1YLR006C HAP4P14064 554 aa6.29□□□□□ -1.4
SSK1YLR006C SEC23P15303 768 aaKnown RBP6.29□□□□□ -1.4
SSK1YLR006C SPC110P32380 944 aa6.29□□□□□ -1.4
SSK1YLR006C SAC6P32599 642 aaKnown RBP6.29□□□□□ -1.4
SSK1YLR006C VMA8P32610 256 aaKnown RBP6.29□□□□□ -1.4
SSK1YLR006C RSC8P43609 557 aaKnown RBP6.29□□□□□ -1.4
SSK1YLR006C COG6P53959 839 aa6.29□□□□□ -1.4
SSK1YLR006C YML131WQ03102 365 aa6.29□□□□□ -1.4
SSK1YLR006C EST2Q06163 884 aa6.29□□□□□ -1.4
SSK1YLR006C YDR056CQ12025 205 aa6.29□□□□□ -1.4
SSK1YLR006C MED1Q12321 566 aa6.29□□□□□ -1.4
SSK1YLR006C PET111P08468 800 aa6.28□□□□□ -1.4
SSK1YLR006C SST2P11972 698 aaKnown RBP6.28□□□□□ -1.4
SSK1YLR006C PCH2P38126 564 aa6.28□□□□□ -1.4
SSK1YLR006C RFT1P38206 574 aaPredicted RBP6.28□□□□□ -1.4
SSK1YLR006C RPN10P38886 268 aaKnown RBP6.28□□□□□ -1.4
SSK1YLR006C SAE2P46946 345 aa6.28□□□□□ -1.4
SSK1YLR006C GPG1P53130 126 aa6.28□□□□□ -1.4
SSK1YLR006C PKH3Q03306 898 aaPredicted RBP6.28□□□□□ -1.4
SSK1YLR006C SPN1Q06505 410 aaPredicted RBP6.28□□□□□ -1.4
SSK1YLR006C MIP1P15801 1254 aa6.28□□□□□ -1.4
SSK1YLR006C PGS1P25578 521 aa6.28□□□□□ -1.4
SSK1YLR006C DAL80P26343 269 aa6.28□□□□□ -1.4
SSK1YLR006C YKL050CP35736 922 aa6.28□□□□□ -1.4
SSK1YLR006C YER034WP40022 185 aaKnown RBP6.28□□□□□ -1.4
SSK1YLR006C MNT3P40549 630 aa6.28□□□□□ -1.4
SSK1YLR006C SMC3P47037 1230 aa6.28□□□□□ -1.4
SSK1YLR006C YJL055WP47044 245 aa6.28□□□□□ -1.4
SSK1YLR006C UBA2P52488 636 aa6.28□□□□□ -1.4
SSK1YLR006C APP1P53933 587 aa6.28□□□□□ -1.4
SSK1YLR006C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
SSK1YLR006C DBP9Q06218 594 aaKnown RBP6.28□□□□□ -1.4
SSK1YLR006C YCG1Q06680 1035 aa6.28□□□□□ -1.4
SSK1YLR006C GPI13Q07830 1017 aa6.28□□□□□ -1.4
SSK1YLR006C TMA16Q08687 178 aa6.28□□□□□ -1.4
SSK1YLR006C TAH18Q12181 623 aa6.28□□□□□ -1.4
SSK1YLR006C GLK1P17709 500 aaKnown RBP6.27□□□□□ -1.41
SSK1YLR006C RER2P35196 286 aa6.27□□□□□ -1.41
SSK1YLR006C TBS1P38114 1094 aa6.27□□□□□ -1.41
SSK1YLR006C AKR1P39010 764 aa6.27□□□□□ -1.41
SSK1YLR006C FMP10P40098 244 aa6.27□□□□□ -1.41
SSK1YLR006C PIP2P52960 996 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms