RNA–Protein interactions for RNA: YDR150W

NUM1, Transcript of Protein required for nuclear migration, yeast

Gene NUM1, Length 8,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUM1	YDR150W	RPP2A	P05319	106 aa	Known RBP	2.75	□□□□□ -1.97
NUM1	YDR150W	PRT1	P06103	763 aa	Known RBP	2.75	□□□□□ -1.97
NUM1	YDR150W	CBP1	P07252	654 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	UIP5	P36137	443 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	TBS1	P38114	1094 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	VTC2	P43585	828 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	GNP1	P48813	663 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	APT1	P49435	187 aa	Known RBP	2.75	□□□□□ -1.97
NUM1	YDR150W	SEC5	P89102	971 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	MSH6	Q03834	1242 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	RKM2	Q03942	479 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	RAD61	Q99359	647 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	VPS3	P23643	1011 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	RPN12	P32496	274 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	ENT2	Q05785	613 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	VIP1	Q06685	1146 aa	Known RBP	2.75	□□□□□ -1.97
NUM1	YDR150W	SLK19	Q08581	821 aa	Known RBP	2.75	□□□□□ -1.97
NUM1	YDR150W	ATP14	Q12349	124 aa		2.75	□□□□□ -1.97
NUM1	YDR150W	SAC3	P46674	1301 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	ILV1	P00927	576 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	AFT1	P22149	690 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	CDC60	P26637	1090 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	VTC4	P47075	721 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	SAP4	P53036	818 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	PCL10	P53124	433 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	RRP9	Q06506	573 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	RPL22A	P05749	121 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	ROX1	P25042	368 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	APM2	P38700	605 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	NIT1	P40447	199 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	SEC27	P41811	889 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	VPS30	Q02948	557 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	POM152	P39685	1337 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	SEC18	P18759	758 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	ADP1	P25371	1049 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	MSH2	P25847	964 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	RVS167	P39743	482 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	HLR1	Q04429	423 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	YNR061C	P53747	219 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	OYE2	Q03558	400 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	SAM3	Q08986	587 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	TUS1	Q06412	1307 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	SRP40	P32583	406 aa	Predicted RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	CPR6	P53691	371 aa	Known RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	APC11	Q12157	165 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	YHR078W	P38799	552 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	ARF3	P40994	183 aa	RIP-Chip data	2.74	□□□□□ -1.97	not detected
NUM1	YDR150W	TMA22	P47089	198 aa	Predicted RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	URB2	P47108	1174 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	CCM1	P48237	864 aa	Predicted RBP	2.74	□□□□□ -1.97
NUM1	YDR150W	SPC105	P53148	917 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	SEY1	Q99287	776 aa		2.74	□□□□□ -1.97
NUM1	YDR150W	SEM1	O94742	89 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	YCR016W	P25617	290 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	ANP1	P32629	500 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	RPC34	P32910	317 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	ADE17	P38009	592 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	UBP9	P39967	754 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	DPB4	Q04603	196 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	RTT103	Q05543	409 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	BDS1	Q08347	646 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	LAP2	Q10740	671 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	RTG2	P32608	588 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	PEP7	P32609	515 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	RER2	P35196	286 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	SSZ1	P38788	538 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	PRP3	Q03338	469 aa	Predicted RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	YDR306C	Q06640	478 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	ADR1	P07248	1323 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
NUM1	YDR150W	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
NUM1	YDR150W	VMA2	P16140	517 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	PSE1	P32337	1089 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	GLC3	P32775	704 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	ECM1	P39715	212 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	LYS4	P49367	693 aa	Predicted RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	MED1	Q12321	566 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	NHA1	Q99271	985 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	CDC8	P00572	216 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	SEC23	P15303	768 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	VMA1	P17255	1071 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	XRS2	P33301	854 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	BDH2	P39713	417 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	MXR1	P40029	184 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	LEM3	P42838	414 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	GTR1	Q00582	310 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	MMR1	Q06324	491 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	LOT6	Q07923	191 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	SPO21	Q12411	609 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	YOR093C	Q12275	1648 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	NUP188	P52593	1655 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	SNA3	P14359	133 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	HPR1	P17629	752 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	KRE2	P27809	442 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	RAM2	P29703	316 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	DED81	P38707	554 aa	Known RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	GID8	P40208	455 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	CDC40	P40968	455 aa	Predicted RBP	2.73	□□□□□ -1.97
NUM1	YDR150W	VPS4	P52917	437 aa		2.73	□□□□□ -1.97
NUM1	YDR150W	TUB4	P53378	473 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms