RNA–Protein interactions for RNA: YDR150W

NUM1, Transcript of Protein required for nuclear migration, yeast

Gene NUM1, Length 8,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUM1	YDR150W	RQC2	Q12532	1038 aa	Known RBP	3.98	□□□□□ -1.77
NUM1	YDR150W	DRS1	P32892	752 aa	Known RBP	3.84	□□□□□ -1.79
NUM1	YDR150W	AIM44	Q99299	758 aa		3.84	□□□□□ -1.79
NUM1	YDR150W	MTC1	P47018	478 aa	Known RBP	3.76	□□□□□ -1.81
NUM1	YDR150W	SGS1	P35187	1447 aa		3.74	□□□□□ -1.81
NUM1	YDR150W	INO80	P53115	1489 aa		3.74	□□□□□ -1.81
NUM1	YDR150W	SPA2	P23201	1466 aa	Known RBP	3.74	□□□□□ -1.81
NUM1	YDR150W	TAF7	Q05021	590 aa		3.66	□□□□□ -1.82
NUM1	YDR150W	TCB3	Q03640	1545 aa	Known RBP	3.6	□□□□□ -1.83
NUM1	YDR150W	TFA1	P36100	482 aa		3.59	□□□□□ -1.83
NUM1	YDR150W	SCT1	P32784	759 aa		3.59	□□□□□ -1.84
NUM1	YDR150W	SAS10	Q12136	610 aa	Predicted RBP	3.59	□□□□□ -1.84
NUM1	YDR150W	RTT106	P40161	455 aa		3.55	□□□□□ -1.84
NUM1	YDR150W	RSE1	Q04693	1361 aa	Known RBP	3.55	□□□□□ -1.84
NUM1	YDR150W	MNN4	P36044	1178 aa		3.54	□□□□□ -1.84
NUM1	YDR150W	FPR3	P38911	411 aa	Known RBP	3.53	□□□□□ -1.85
NUM1	YDR150W	TAF2	P23255	1407 aa		3.52	□□□□□ -1.85
NUM1	YDR150W	PAF1	P38351	445 aa		3.5	□□□□□ -1.85
NUM1	YDR150W	SSN2	P38931	1420 aa		3.49	□□□□□ -1.85
NUM1	YDR150W	IFH1	P39520	1085 aa		3.49	□□□□□ -1.85
NUM1	YDR150W	SKI3	P17883	1432 aa	Known RBP	3.48	□□□□□ -1.85
NUM1	YDR150W	NAP1	P25293	417 aa	Known RBP	3.48	□□□□□ -1.85
NUM1	YDR150W	SPT6	P23615	1451 aa	Known RBP	3.47	□□□□□ -1.85
NUM1	YDR150W	NOP7	P53261	605 aa	Known RBP	3.46	□□□□□ -1.86
NUM1	YDR150W	BUD4	P47136	1447 aa		3.43	□□□□□ -1.86
NUM1	YDR150W	URN1	Q06525	465 aa	Known RBP	3.43	□□□□□ -1.86
NUM1	YDR150W	ASF1	P32447	279 aa		3.42	□□□□□ -1.86
NUM1	YDR150W	YTA7	P40340	1379 aa		3.42	□□□□□ -1.86
NUM1	YDR150W	STH1	P32597	1359 aa		3.41	□□□□□ -1.86
NUM1	YDR150W	KOG1	P38873	1557 aa		3.4	□□□□□ -1.86
NUM1	YDR150W	YRB30	P53107	440 aa	Predicted RBP	3.4	□□□□□ -1.86
NUM1	YDR150W	XRN1	P22147	1528 aa	Known RBP	3.4	□□□□□ -1.87
NUM1	YDR150W	ECM5	Q03214	1411 aa		3.39	□□□□□ -1.87
NUM1	YDR150W	CKB1	P43639	278 aa		3.38	□□□□□ -1.87
NUM1	YDR150W	SMC4	Q12267	1418 aa		3.37	□□□□□ -1.87
NUM1	YDR150W	BUD21	Q08492	214 aa	Predicted RBP	3.37	□□□□□ -1.87
NUM1	YDR150W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
NUM1	YDR150W	POL5	P39985	1022 aa	Known RBP	3.34	□□□□□ -1.87
NUM1	YDR150W	BFR2	Q06631	534 aa	Known RBP	3.34	□□□□□ -1.87
NUM1	YDR150W	RNA1	P11745	407 aa	Known RBP	3.33	□□□□□ -1.88
NUM1	YDR150W	HSL1	P34244	1518 aa		3.33	□□□□□ -1.88
NUM1	YDR150W	DNA2	P38859	1522 aa		3.33	□□□□□ -1.88
NUM1	YDR150W	FUN12	P39730	1002 aa	Known RBP	3.33	□□□□□ -1.88
NUM1	YDR150W	SWR1	Q05471	1514 aa		3.32	□□□□□ -1.88
NUM1	YDR150W	TRM732	Q03496	1420 aa		3.32	□□□□□ -1.88
NUM1	YDR150W	MRX12	P47084	519 aa		3.32	□□□□□ -1.88
NUM1	YDR150W	MON2	P48563	1636 aa	Predicted RBP	3.31	□□□□□ -1.88
NUM1	YDR150W	MET10	P39692	1035 aa		3.31	□□□□□ -1.88
NUM1	YDR150W	NOP53	Q12080	455 aa	Known RBP	3.3	□□□□□ -1.88
NUM1	YDR150W	PAN1	P32521	1480 aa		3.29	□□□□□ -1.88
NUM1	YDR150W	ABP1	P15891	592 aa	Known RBP	3.28	□□□□□ -1.88
NUM1	YDR150W	ENP1	P38333	483 aa	Known RBP	3.28	□□□□□ -1.88
NUM1	YDR150W	REV3	P14284	1504 aa		3.27	□□□□□ -1.89
NUM1	YDR150W	STU1	P38198	1513 aa		3.27	□□□□□ -1.89
NUM1	YDR150W	MYO2	P19524	1574 aa	Known RBP	3.27	□□□□□ -1.89
NUM1	YDR150W	DOS2	P54858	310 aa		3.26	□□□□□ -1.89
NUM1	YDR150W	HIR3	P47171	1648 aa		3.25	□□□□□ -1.89
NUM1	YDR150W	UFD4	P33202	1483 aa		3.25	□□□□□ -1.89
NUM1	YDR150W	TOP2	P06786	1428 aa	Known RBP	3.24	□□□□□ -1.89
NUM1	YDR150W	THO2	P53552	1597 aa	Known RBP	3.24	□□□□□ -1.89
NUM1	YDR150W	SEC3	P33332	1336 aa	Known RBP	3.24	□□□□□ -1.89
NUM1	YDR150W	AVT3	P36062	692 aa		3.24	□□□□□ -1.89
NUM1	YDR150W	SIS2	P36024	562 aa		3.23	□□□□□ -1.89
NUM1	YDR150W	DRS2	P39524	1355 aa		3.23	□□□□□ -1.89
NUM1	YDR150W	MDS3	P53094	1487 aa		3.23	□□□□□ -1.89
NUM1	YDR150W	ORC1	P54784	914 aa	Predicted RBP	3.23	□□□□□ -1.89
NUM1	YDR150W	ESL2	P36168	1195 aa		3.22	□□□□□ -1.89
NUM1	YDR150W	LEO1	P38439	464 aa		3.22	□□□□□ -1.89
NUM1	YDR150W	LEU3	P08638	886 aa		3.22	□□□□□ -1.89
NUM1	YDR150W	NOP2	P40991	618 aa	Known RBP	3.22	□□□□□ -1.89
NUM1	YDR150W	RTF1	P53064	558 aa		3.22	□□□□□ -1.89
NUM1	YDR150W	SIN3	P22579	1536 aa		3.22	□□□□□ -1.89
NUM1	YDR150W	IKI3	Q06706	1349 aa	Known RBP	3.22	□□□□□ -1.89
NUM1	YDR150W	QCR6	P00127	147 aa		3.21	□□□□□ -1.9
NUM1	YDR150W	SPP41	P38904	1435 aa		3.21	□□□□□ -1.9
NUM1	YDR150W	CHD1	P32657	1468 aa		3.2	□□□□□ -1.9
NUM1	YDR150W	MMS1	Q06211	1407 aa		3.2	□□□□□ -1.9
NUM1	YDR150W	YJL181W	P46987	611 aa		3.19	□□□□□ -1.9
NUM1	YDR150W	MYO4	P32492	1471 aa		3.19	□□□□□ -1.9
NUM1	YDR150W	PAP2	P53632	584 aa	Known RBP	3.19	□□□□□ -1.9
NUM1	YDR150W	YPK9	Q12697	1472 aa		3.19	□□□□□ -1.9
NUM1	YDR150W	RLF2	Q12495	606 aa		3.19	□□□□□ -1.9
NUM1	YDR150W	BNR1	P40450	1375 aa		3.19	□□□□□ -1.9
NUM1	YDR150W	TAF5	P38129	798 aa		3.18	□□□□□ -1.9
NUM1	YDR150W	NOP8	Q08287	484 aa	Predicted RBP	3.18	□□□□□ -1.9
NUM1	YDR150W	NUP157	P40064	1391 aa	Known RBP	3.18	□□□□□ -1.9
NUM1	YDR150W	MMS22	Q06164	1454 aa		3.18	□□□□□ -1.9
NUM1	YDR150W	BPT1	P14772	1559 aa		3.18	□□□□□ -1.9
NUM1	YDR150W	TY1B-DR4	Q07793	1604 aa		3.18	□□□□□ -1.9
NUM1	YDR150W	HSP82	P02829	709 aa	Known RBP	3.18	□□□□□ -1.9
NUM1	YDR150W	DEF1	P35732	738 aa	Known RBP	3.17	□□□□□ -1.9
NUM1	YDR150W	GEA2	P39993	1459 aa	Known RBP	3.17	□□□□□ -1.9
NUM1	YDR150W	POL1	P13382	1468 aa		3.17	□□□□□ -1.9
NUM1	YDR150W	TSC11	P40061	1430 aa		3.17	□□□□□ -1.9
NUM1	YDR150W	TOP1	P04786	769 aa		3.16	□□□□□ -1.9
NUM1	YDR150W	HSC82	P15108	705 aa	Known RBP	3.16	□□□□□ -1.9
NUM1	YDR150W	KAR2	P16474	682 aa	Known RBP	3.16	□□□□□ -1.9
NUM1	YDR150W	NMD2	P38798	1089 aa	Known RBP	3.16	□□□□□ -1.9
NUM1	YDR150W	GEA1	P47102	1408 aa	Predicted RBP	3.16	□□□□□ -1.9
NUM1	YDR150W	JIP3	O13555	125 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms