RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C TOM71P38825 639 aaKnown RBP8.33□□□□□ -1.08
UME1YPL139C FIR1P40020 876 aa8.33□□□□□ -1.08
UME1YPL139C YPL034WQ03083 165 aa8.33□□□□□ -1.08
UME1YPL139C WHI4Q07655 649 aaKnown RBP8.33□□□□□ -1.08
UME1YPL139C MET6P05694 767 aaKnown RBP8.32□□□□□ -1.08
UME1YPL139C MIP1P15801 1254 aa8.32□□□□□ -1.08
UME1YPL139C FBP26P32604 452 aa8.32□□□□□ -1.08
UME1YPL139C PTC3P34221 468 aaKnown RBP8.32□□□□□ -1.08
UME1YPL139C PAN5P38787 379 aa8.32□□□□□ -1.08
UME1YPL139C SOL3P38858 249 aa8.32□□□□□ -1.08
UME1YPL139C LIF1P53150 421 aa8.32□□□□□ -1.08
UME1YPL139C YAF9P53930 226 aa8.32□□□□□ -1.08
UME1YPL139C PTA1Q01329 785 aaPredicted RBP8.32□□□□□ -1.08
UME1YPL139C VIP1Q06685 1146 aaKnown RBP8.32□□□□□ -1.08
UME1YPL139C ISA1Q07821 250 aaPredicted RBP8.32□□□□□ -1.08
UME1YPL139C MPC54Q08550 464 aa8.32□□□□□ -1.08
UME1YPL139C CLF1Q12309 687 aaPredicted RBP8.32□□□□□ -1.08
UME1YPL139C TRM11Q12463 433 aa8.32□□□□□ -1.08
UME1YPL139C HIP1P06775 603 aa8.31□□□□□ -1.08
UME1YPL139C TFC4P33339 1025 aa8.31□□□□□ -1.08
UME1YPL139C RPS7BP48164 190 aaKnown RBP8.31□□□□□ -1.08
UME1YPL139C LSB1P53281 241 aa8.31□□□□□ -1.08
UME1YPL139C OXR1Q08952 273 aa8.31□□□□□ -1.08
UME1YPL139C CIT1P00890 479 aa8.3□□□□□ -1.08
UME1YPL139C MCM4P30665 933 aaKnown RBP8.3□□□□□ -1.08
UME1YPL139C DAK1P54838 584 aaKnown RBP8.3□□□□□ -1.08
UME1YPL139C MAS2P11914 482 aa8.29□□□□□ -1.08
UME1YPL139C SUL1P38359 859 aa8.29□□□□□ -1.08
UME1YPL139C SPO22P40511 975 aa8.29□□□□□ -1.08
UME1YPL139C PCI8P40512 444 aa8.29□□□□□ -1.08
UME1YPL139C YVH1Q02256 364 aaKnown RBP8.29□□□□□ -1.08
UME1YPL139C YDR341CQ05506 607 aaKnown RBP8.29□□□□□ -1.08
UME1YPL139C RPL8AP17076 256 aaKnown RBP8.28□□□□□ -1.08
UME1YPL139C TPM1P17536 199 aaKnown RBP8.28□□□□□ -1.08
UME1YPL139C VPS1P21576 704 aaKnown RBP8.28□□□□□ -1.08
UME1YPL139C SWI4P25302 1093 aaKnown RBP8.28□□□□□ -1.08
UME1YPL139C UBP11P36026 717 aa8.28□□□□□ -1.08
UME1YPL139C SAD1P43589 448 aa8.28□□□□□ -1.08
UME1YPL139C ALG2P43636 503 aa8.28□□□□□ -1.08
UME1YPL139C YGR273CP53329 174 aa8.28□□□□□ -1.08
UME1YPL139C GIS4Q04233 774 aa8.28□□□□□ -1.08
UME1YPL139C ARP6Q12509 438 aa8.28□□□□□ -1.08
UME1YPL139C YDR524C-BQ3E6R4 66 aa8.28□□□□□ -1.08
UME1YPL139C MATALPHA2P0CY08 210 aa8.27□□□□□ -1.09
UME1YPL139C HMLALPHA2P0CY09 210 aa8.27□□□□□ -1.09
UME1YPL139C HCA4P20448 770 aaKnown RBP8.27□□□□□ -1.09
UME1YPL139C RXT2P38255 430 aa8.27□□□□□ -1.09
UME1YPL139C KRI1P42846 591 aaKnown RBP8.27□□□□□ -1.09
UME1YPL139C VPS72Q03388 795 aa8.27□□□□□ -1.09
UME1YPL139C CDC6P09119 513 aa8.26□□□□□ -1.09
UME1YPL139C KIN82P25341 720 aa8.26□□□□□ -1.09
UME1YPL139C VPS53P47061 822 aa8.26□□□□□ -1.09
UME1YPL139C YGL138CP53122 345 aa8.26□□□□□ -1.09
UME1YPL139C ORC4P54791 529 aa8.26□□□□□ -1.09
UME1YPL139C AIM33Q04516 312 aa8.26□□□□□ -1.09
UME1YPL139C AIM44Q99299 758 aa8.26□□□□□ -1.09
UME1YPL139C MOT1P32333 1867 aa8.25□□□□□ -1.09
UME1YPL139C MAK11P20484 414 aaKnown RBP8.25□□□□□ -1.09
UME1YPL139C CAD1P24813 409 aaKnown RBP8.25□□□□□ -1.09
UME1YPL139C RPN10P38886 268 aaKnown RBP8.25□□□□□ -1.09
UME1YPL139C CIT3P43635 486 aa8.25□□□□□ -1.09
UME1YPL139C NMA111P53920 997 aa8.25□□□□□ -1.09
UME1YPL139C YLR407WQ06070 228 aa8.25□□□□□ -1.09
UME1YPL139C YPR015CQ12531 247 aa8.25□□□□□ -1.09
UME1YPL139C YDR034W-BQ6Q5X2 51 aa8.25□□□□□ -1.09
UME1YPL139C ESS1P22696 170 aa8.24□□□□□ -1.09
UME1YPL139C EDS1P38073 919 aa8.24□□□□□ -1.09
UME1YPL139C CCT3P39077 534 aaKnown RBP8.24□□□□□ -1.09
UME1YPL139C TPM2P40414 161 aa8.24□□□□□ -1.09
UME1YPL139C INP51P40559 946 aaKnown RBP8.24□□□□□ -1.09
UME1YPL139C BRE2P43132 505 aa8.24□□□□□ -1.09
UME1YPL139C ENT3P47160 408 aa8.24□□□□□ -1.09
UME1YPL139C UBP15P50101 1230 aa8.24□□□□□ -1.09
UME1YPL139C SMD2Q06217 110 aaKnown RBP8.24□□□□□ -1.09
UME1YPL139C RTP1Q12751 981 aa8.24□□□□□ -1.09
UME1YPL139C FKS1P38631 1876 aaKnown RBP8.23□□□□□ -1.09
UME1YPL139C POT1P27796 417 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
UME1YPL139C SEC8P32855 1065 aa8.23□□□□□ -1.09
UME1YPL139C BMH2P34730 273 aaKnown RBP8.23□□□□□ -1.09
UME1YPL139C WHI3P34761 661 aaKnown RBP8.23□□□□□ -1.09
UME1YPL139C GRS1P38088 690 aaKnown RBP8.23□□□□□ -1.09
UME1YPL139C TVP23P38962 199 aa8.23□□□□□ -1.09
UME1YPL139C YNL115CP53925 644 aa8.23□□□□□ -1.09
UME1YPL139C ATG11Q12527 1178 aa8.23□□□□□ -1.09
UME1YPL139C GAA1P39012 614 aa8.22□□□□□ -1.09
UME1YPL139C YKE2P52553 114 aa8.22□□□□□ -1.09
UME1YPL139C ARP5P53946 755 aa8.22□□□□□ -1.09
UME1YPL139C FMP30Q02883 468 aa8.22□□□□□ -1.09
UME1YPL139C TY1B-AO13527 1196 aaKnown RBP8.22□□□□□ -1.09
UME1YPL139C SEC20P28791 383 aa8.22□□□□□ -1.09
UME1YPL139C TIM23P32897 222 aa8.22□□□□□ -1.09
UME1YPL139C GPT2P36148 743 aa8.22□□□□□ -1.09
UME1YPL139C ISW1P38144 1129 aa8.22□□□□□ -1.09
UME1YPL139C YFL040WP43562 540 aa8.22□□□□□ -1.09
UME1YPL139C CTF18P49956 741 aa8.22□□□□□ -1.09
UME1YPL139C AZR1P50080 613 aa8.22□□□□□ -1.09
UME1YPL139C DIP5P53388 608 aa8.22□□□□□ -1.09
UME1YPL139C GDE1Q02979 1223 aa8.22□□□□□ -1.09
UME1YPL139C OYE2Q03558 400 aaKnown RBP8.22□□□□□ -1.09
UME1YPL139C AHC1Q12433 566 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms