RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W UTR2P32623 467 aa8.33□□□□□ -1.08
SNF7YLR025W MDL2P33311 773 aa8.33□□□□□ -1.08
SNF7YLR025W BOI1P38041 980 aaKnown RBP8.33□□□□□ -1.08
SNF7YLR025W ALG2P43636 503 aa8.33□□□□□ -1.08
SNF7YLR025W ACS2P52910 683 aaKnown RBP8.33□□□□□ -1.08
SNF7YLR025W YML083CQ04526 418 aa8.33□□□□□ -1.08
SNF7YLR025W DAT1P13483 248 aaKnown RBP8.32□□□□□ -1.08
SNF7YLR025W MBR1P23493 339 aa8.32□□□□□ -1.08
SNF7YLR025W MPE1P35728 441 aaKnown RBP8.32□□□□□ -1.08
SNF7YLR025W RPN10P38886 268 aaKnown RBP8.32□□□□□ -1.08
SNF7YLR025W NPR2P39923 615 aa8.32□□□□□ -1.08
SNF7YLR025W ICP55P40051 511 aa8.32□□□□□ -1.08
SNF7YLR025W YPT11P48559 417 aa8.32□□□□□ -1.08
SNF7YLR025W FAR11P53917 953 aa8.32□□□□□ -1.08
SNF7YLR025W RPL34AP87262 121 aaPredicted RBP8.32□□□□□ -1.08
SNF7YLR025W SSL2Q00578 843 aa8.32□□□□□ -1.08
SNF7YLR025W KAR5Q04746 504 aa8.32□□□□□ -1.08
SNF7YLR025W YMR074CQ04773 145 aa8.32□□□□□ -1.08
SNF7YLR025W YLR407WQ06070 228 aa8.32□□□□□ -1.08
SNF7YLR025W UTP10P42945 1769 aaKnown RBP8.31□□□□□ -1.08
SNF7YLR025W COQ1P18900 473 aa8.31□□□□□ -1.08
SNF7YLR025W SAC6P32599 642 aaKnown RBP8.31□□□□□ -1.08
SNF7YLR025W GRX7P38068 203 aa8.31□□□□□ -1.08
SNF7YLR025W TBS1P38114 1094 aa8.31□□□□□ -1.08
SNF7YLR025W UBX7P38349 436 aa8.31□□□□□ -1.08
SNF7YLR025W AKR1P39010 764 aa8.31□□□□□ -1.08
SNF7YLR025W STU2P46675 888 aa8.31□□□□□ -1.08
SNF7YLR025W JJJ2P46997 583 aa8.31□□□□□ -1.08
SNF7YLR025W RPS15Q01855 142 aaKnown RBP8.31□□□□□ -1.08
SNF7YLR025W PPM2Q08282 695 aa8.31□□□□□ -1.08
SNF7YLR025W PSF3Q12146 194 aa8.31□□□□□ -1.08
SNF7YLR025W CBP3P21560 335 aa8.3□□□□□ -1.08
SNF7YLR025W BMH2P34730 273 aaKnown RBP8.3□□□□□ -1.08
SNF7YLR025W PTK1P36002 662 aaPredicted RBP8.3□□□□□ -1.08
SNF7YLR025W MAL31P38156 614 aa8.3□□□□□ -1.08
SNF7YLR025W RFT1P38206 574 aaPredicted RBP8.3□□□□□ -1.08
SNF7YLR025W GLO3P38682 493 aaKnown RBP8.3□□□□□ -1.08
SNF7YLR025W PIP2P52960 996 aa8.3□□□□□ -1.08
SNF7YLR025W RPT4P53549 437 aaKnown RBP8.3□□□□□ -1.08
SNF7YLR025W SPC110P32380 944 aa8.29□□□□□ -1.08
SNF7YLR025W LYS4P49367 693 aaPredicted RBP8.29□□□□□ -1.08
SNF7YLR025W HOS3Q02959 697 aaKnown RBP8.29□□□□□ -1.08
SNF7YLR025W UBX2Q04228 584 aa8.29□□□□□ -1.08
SNF7YLR025W HCR1Q05775 265 aaKnown RBP8.29□□□□□ -1.08
SNF7YLR025W ARG82P07250 355 aa8.28□□□□□ -1.08
SNF7YLR025W GSY2P27472 705 aa8.28□□□□□ -1.08
SNF7YLR025W MNR2P35724 969 aa8.28□□□□□ -1.08
SNF7YLR025W RTS1P38903 757 aa8.28□□□□□ -1.08
SNF7YLR025W SLX8P40072 274 aa8.28□□□□□ -1.08
SNF7YLR025W MSH4P40965 878 aaPredicted RBP8.28□□□□□ -1.08
SNF7YLR025W ALD2P47771 506 aa8.28□□□□□ -1.08
SNF7YLR025W ROM1P53046 1155 aa8.28□□□□□ -1.08
SNF7YLR025W GDE1Q02979 1223 aa8.28□□□□□ -1.08
SNF7YLR025W ASF1P32447 279 aa8.27□□□□□ -1.09
SNF7YLR025W ANP1P32629 500 aa8.27□□□□□ -1.09
SNF7YLR025W RPT3P33298 428 aaKnown RBP8.27□□□□□ -1.09
SNF7YLR025W DLD3P39976 496 aaKnown RBP8.27□□□□□ -1.09
SNF7YLR025W YFH7P43591 353 aa8.27□□□□□ -1.09
SNF7YLR025W OSW7P43611 510 aa8.27□□□□□ -1.09
SNF7YLR025W IRC4Q03036 179 aa8.27□□□□□ -1.09
SNF7YLR025W TFC6Q06339 672 aa8.27□□□□□ -1.09
SNF7YLR025W RIX7Q07844 837 aaKnown RBP8.27□□□□□ -1.09
SNF7YLR025W WTM2Q12206 467 aa8.27□□□□□ -1.09
SNF7YLR025W SFI1Q12369 946 aa8.27□□□□□ -1.09
SNF7YLR025W CHO2P05374 869 aaKnown RBP8.26□□□□□ -1.09
SNF7YLR025W SWI4P25302 1093 aaKnown RBP8.26□□□□□ -1.09
SNF7YLR025W FYV10P40492 516 aa8.26□□□□□ -1.09
SNF7YLR025W RTC4P53850 401 aa8.26□□□□□ -1.09
SNF7YLR025W EIS1Q05050 843 aaKnown RBP8.26□□□□□ -1.09
SNF7YLR025W GET3Q12154 354 aaKnown RBP8.26□□□□□ -1.09
SNF7YLR025W CEX1Q12453 761 aa8.26□□□□□ -1.09
SNF7YLR025W SRF1Q12516 437 aa8.26□□□□□ -1.09
SNF7YLR025W RPL22AP05749 121 aaKnown RBP8.25□□□□□ -1.09
SNF7YLR025W SWI5P08153 709 aa8.25□□□□□ -1.09
SNF7YLR025W RPS6AP0CX37 236 aaKnown RBP8.25□□□□□ -1.09
SNF7YLR025W RPS6BP0CX38 236 aaPredicted RBP8.25□□□□□ -1.09
SNF7YLR025W CAF20P12962 161 aaKnown RBP8.25□□□□□ -1.09
SNF7YLR025W RIT1P23796 513 aa8.25□□□□□ -1.09
SNF7YLR025W KRE2P27809 442 aa8.25□□□□□ -1.09
SNF7YLR025W SRP40P32583 406 aaPredicted RBP8.25□□□□□ -1.09
SNF7YLR025W SAP190P36123 1033 aa8.25□□□□□ -1.09
SNF7YLR025W AAD14P42884 376 aa8.25□□□□□ -1.09
SNF7YLR025W PTK2P47116 818 aaKnown RBP8.25□□□□□ -1.09
SNF7YLR025W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
SNF7YLR025W YJR115WP47152 169 aa8.25□□□□□ -1.09
SNF7YLR025W VPS60Q03390 229 aa8.25□□□□□ -1.09
SNF7YLR025W WAR1Q03631 944 aa8.25□□□□□ -1.09
SNF7YLR025W GFD1Q04839 188 aaKnown RBP8.25□□□□□ -1.09
SNF7YLR025W YCG1Q06680 1035 aa8.25□□□□□ -1.09
SNF7YLR025W YPL260WQ08977 551 aa8.25□□□□□ -1.09
SNF7YLR025W VAN1P23642 535 aa8.24□□□□□ -1.09
SNF7YLR025W MSH3P25336 1018 aa8.24□□□□□ -1.09
SNF7YLR025W TCD1P38756 429 aa8.24□□□□□ -1.09
SNF7YLR025W VPS8P39702 1274 aa8.24□□□□□ -1.09
SNF7YLR025W YDR341CQ05506 607 aaKnown RBP8.24□□□□□ -1.09
SNF7YLR025W DCS2Q12123 353 aa8.24□□□□□ -1.09
SNF7YLR025W TIP41Q12199 356 aa8.24□□□□□ -1.09
SNF7YLR025W RNR3P21672 869 aaKnown RBP8.23□□□□□ -1.09
SNF7YLR025W MAK31P23059 88 aa8.23□□□□□ -1.09
SNF7YLR025W CDC15P27636 974 aa8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms