RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE1YLR007W PTC5Q12511 572 aa6.05□□□□□ -1.44
NSE1YLR007W YER152CP10356 443 aa6.04□□□□□ -1.44
NSE1YLR007W YKL091CP33324 310 aaKnown RBP6.04□□□□□ -1.44
NSE1YLR007W PBP2P38151 413 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
NSE1YLR007W YHR020WP38708 688 aaKnown RBP6.04□□□□□ -1.44
NSE1YLR007W SIP5P40210 489 aaKnown RBP6.04□□□□□ -1.44
NSE1YLR007W PFD1P46988 109 aa6.04□□□□□ -1.44
NSE1YLR007W TIM54P47045 478 aa6.04□□□□□ -1.44
NSE1YLR007W RKM2Q03942 479 aa6.04□□□□□ -1.44
NSE1YLR007W YLR257WQ06146 321 aaKnown RBP6.04□□□□□ -1.44
NSE1YLR007W CYC7P00045 113 aa6.03□□□□□ -1.44
NSE1YLR007W RET1P22276 1149 aaKnown RBP6.03□□□□□ -1.44
NSE1YLR007W DBP2P24783 546 aaKnown RBP6.03□□□□□ -1.44
NSE1YLR007W AGP1P25376 633 aa6.03□□□□□ -1.44
NSE1YLR007W SRP40P32583 406 aaPredicted RBP6.03□□□□□ -1.44
NSE1YLR007W PUB1P32588 453 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
NSE1YLR007W QNS1P38795 714 aaKnown RBP6.03□□□□□ -1.44
NSE1YLR007W ENT3P47160 408 aa6.03□□□□□ -1.44
NSE1YLR007W NAN1Q02931 896 aaKnown RBP6.03□□□□□ -1.44
NSE1YLR007W BRE4Q07660 1125 aa6.03□□□□□ -1.44
NSE1YLR007W PPM2Q08282 695 aa6.03□□□□□ -1.44
NSE1YLR007W CDC53Q12018 815 aaKnown RBP6.03□□□□□ -1.44
NSE1YLR007W KIP1P28742 1111 aa6.02□□□□□ -1.45
NSE1YLR007W YJL045WP47052 634 aa6.02□□□□□ -1.45
NSE1YLR007W FMP25Q08023 583 aa6.02□□□□□ -1.45
NSE1YLR007W YLL054CQ12244 843 aa6.02□□□□□ -1.45
NSE1YLR007W NFS1P25374 497 aa6.01□□□□□ -1.45
NSE1YLR007W SBA1P28707 216 aaKnown RBP6.01□□□□□ -1.45
NSE1YLR007W BUD6P41697 788 aa6.01□□□□□ -1.45
NSE1YLR007W SPO20Q04359 397 aa6.01□□□□□ -1.45
NSE1YLR007W RCL1Q08096 367 aaPredicted RBP6.01□□□□□ -1.45
NSE1YLR007W RPL8BP29453 256 aaKnown RBP6□□□□□ -1.45
NSE1YLR007W WHI3P34761 661 aaKnown RBP6□□□□□ -1.45
NSE1YLR007W AVT1P47082 602 aa6□□□□□ -1.45
NSE1YLR007W GIC2Q06648 383 aa6□□□□□ -1.45
NSE1YLR007W UBX5Q06682 500 aa6□□□□□ -1.45
NSE1YLR007W ERR1P0CX10 437 aa5.99□□□□□ -1.45
NSE1YLR007W ERR2P0CX11 437 aa5.99□□□□□ -1.45
NSE1YLR007W RPS4AP0CX35 261 aaKnown RBP5.99□□□□□ -1.45
NSE1YLR007W RPS4BP0CX36 261 aaKnown RBP5.99□□□□□ -1.45
NSE1YLR007W MSB1P21339 1137 aaKnown RBP5.99□□□□□ -1.45
NSE1YLR007W YKL107WP34251 309 aa5.99□□□□□ -1.45
NSE1YLR007W BRN1P38170 754 aa5.99□□□□□ -1.45
NSE1YLR007W MXR1P40029 184 aa5.99□□□□□ -1.45
NSE1YLR007W SPO21Q12411 609 aa5.99□□□□□ -1.45
NSE1YLR007W RKM4Q12504 494 aa5.99□□□□□ -1.45
NSE1YLR007W TIM23P32897 222 aa5.98□□□□□ -1.45
NSE1YLR007W SMY2P32909 740 aaKnown RBP5.98□□□□□ -1.45
NSE1YLR007W ERT1P38140 529 aa5.98□□□□□ -1.45
NSE1YLR007W ATG14P38270 344 aa5.98□□□□□ -1.45
NSE1YLR007W RGD1P38339 666 aa5.98□□□□□ -1.45
NSE1YLR007W ALT1P52893 592 aa5.98□□□□□ -1.45
NSE1YLR007W SDH1Q00711 640 aa5.98□□□□□ -1.45
NSE1YLR007W TPP1Q03796 238 aa5.98□□□□□ -1.45
NSE1YLR007W PUS7Q08647 676 aaKnown RBP5.98□□□□□ -1.45
NSE1YLR007W STI1P15705 589 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
NSE1YLR007W RSP5P39940 809 aaKnown RBP5.97□□□□□ -1.45
NSE1YLR007W HNT2P49775 206 aa5.97□□□□□ -1.45
NSE1YLR007W RTA1P53047 317 aa5.97□□□□□ -1.45
NSE1YLR007W YRB30P53107 440 aaPredicted RBP5.97□□□□□ -1.45
NSE1YLR007W RNH70P53331 553 aa5.97□□□□□ -1.45
NSE1YLR007W RPN4Q03465 531 aa5.97□□□□□ -1.45
NSE1YLR007W SHE9Q04172 456 aa5.97□□□□□ -1.45
NSE1YLR007W FLC1Q08967 793 aa5.97□□□□□ -1.45
NSE1YLR007W LAP2Q10740 671 aa5.97□□□□□ -1.45
NSE1YLR007W GCD1P09032 578 aaPredicted RBP5.96□□□□□ -1.46
NSE1YLR007W YJL049WP47048 450 aa5.96□□□□□ -1.46
NSE1YLR007W VPS53P47061 822 aa5.96□□□□□ -1.46
NSE1YLR007W RPL11AP0C0W9 174 aaKnown RBP5.95□□□□□ -1.46
NSE1YLR007W HBS1P32769 611 aaKnown RBP5.95□□□□□ -1.46
NSE1YLR007W MRP8P35719 219 aa5.95□□□□□ -1.46
NSE1YLR007W NNK1P36003 928 aa5.95□□□□□ -1.46
NSE1YLR007W YKL151CP36059 337 aa5.95□□□□□ -1.46
NSE1YLR007W PNT1P38969 423 aa5.95□□□□□ -1.46
NSE1YLR007W IRC24P40580 263 aa5.95□□□□□ -1.46
NSE1YLR007W YGR125WP53273 1036 aa5.95□□□□□ -1.46
NSE1YLR007W GNT1Q12096 491 aa5.95□□□□□ -1.46
NSE1YLR007W RPL11BQ3E757 174 aaPredicted RBP5.95□□□□□ -1.46
NSE1YLR007W CIT1P00890 479 aa5.94□□□□□ -1.46
NSE1YLR007W BET3P36149 193 aa5.94□□□□□ -1.46
NSE1YLR007W IRR1P40541 1150 aa5.94□□□□□ -1.46
NSE1YLR007W MMM1P41800 426 aa5.94□□□□□ -1.46
NSE1YLR007W YVC1Q12324 675 aa5.94□□□□□ -1.46
NSE1YLR007W TOP3P13099 656 aa5.93□□□□□ -1.46
NSE1YLR007W SNF5P18480 905 aa5.93□□□□□ -1.46
NSE1YLR007W ALR2P43553 858 aa5.93□□□□□ -1.46
NSE1YLR007W SAM35P14693 329 aa5.92□□□□□ -1.46
NSE1YLR007W YSC84P32793 468 aa5.92□□□□□ -1.46
NSE1YLR007W YBR284WP38150 797 aa5.92□□□□□ -1.46
NSE1YLR007W PBY1P38254 753 aa5.92□□□□□ -1.46
NSE1YLR007W HSE1P38753 452 aa5.92□□□□□ -1.46
NSE1YLR007W NUP82P40368 713 aa5.92□□□□□ -1.46
NSE1YLR007W HRQ1Q05549 1077 aa5.92□□□□□ -1.46
NSE1YLR007W SPP382Q06411 708 aaPredicted RBP5.92□□□□□ -1.46
NSE1YLR007W YPL260WQ08977 551 aa5.92□□□□□ -1.46
NSE1YLR007W ARE1P25628 610 aa5.91□□□□□ -1.46
NSE1YLR007W PIN4P34217 668 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
NSE1YLR007W NPP2P39997 493 aa5.91□□□□□ -1.46
NSE1YLR007W CIT3P43635 486 aa5.91□□□□□ -1.46
NSE1YLR007W ALG12P53730 551 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms