RNA–Protein interactions for RNA: YJR005C-A

LSO1, Transcript of Putative protein of unknown function, yeast

Gene LSO1, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO1	YJR005C-A	YPL150W	Q12152	901 aa		5.07	□□□□□ -1.6
LSO1	YJR005C-A	CHO2	P05374	869 aa	Known RBP	5.06	□□□□□ -1.6
LSO1	YJR005C-A	CTT1	P06115	562 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	STE6	P12866	1290 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	FRS2	P15625	503 aa	Known RBP	5.06	□□□□□ -1.6
LSO1	YJR005C-A	RGP1	P16664	663 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	RET1	P22276	1149 aa	Known RBP	5.06	□□□□□ -1.6
LSO1	YJR005C-A	ICL1	P28240	557 aa	Predicted RBP	5.06	□□□□□ -1.6
LSO1	YJR005C-A	KNS1	P32350	737 aa	Predicted RBP	5.06	□□□□□ -1.6
LSO1	YJR005C-A	ANP1	P32629	500 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	MNN4	P36044	1178 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	ERT1	P38140	529 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	YHL050C	P38721	697 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	LSB3	P43603	459 aa	Known RBP	5.06	□□□□□ -1.6
LSO1	YJR005C-A	ALG2	P43636	503 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	EAF6	P47128	113 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	PRP42	Q03776	544 aa	Known RBP	5.06	□□□□□ -1.6
LSO1	YJR005C-A	YPR084W	Q06821	456 aa		5.06	□□□□□ -1.6
LSO1	YJR005C-A	RRG1	Q12167	365 aa	Predicted RBP	5.06	□□□□□ -1.6
LSO1	YJR005C-A	HXK1	P04806	485 aa	Known RBP	5.05	□□□□□ -1.6
LSO1	YJR005C-A	PGI1	P12709	554 aa	Known RBP	5.05	□□□□□ -1.6
LSO1	YJR005C-A	RPS7A	P26786	190 aa	Known RBP	5.05	□□□□□ -1.6
LSO1	YJR005C-A	YKU70	P32807	602 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	BMH2	P34730	273 aa	Known RBP	5.05	□□□□□ -1.6
LSO1	YJR005C-A	MAL33	P38157	468 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	NPR3	P38742	1146 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	VPS8	P39702	1274 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	VID27	P40157	782 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	VTC4	P47075	721 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	NAM8	Q00539	523 aa	Known RBP	5.05	□□□□□ -1.6
LSO1	YJR005C-A	VMS1	Q04311	632 aa	Known RBP	5.05	□□□□□ -1.6
LSO1	YJR005C-A	YLR407W	Q06070	228 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	ACK1	Q07622	623 aa	Predicted RBP	5.05	□□□□□ -1.6
LSO1	YJR005C-A	KEL3	Q08979	651 aa	Predicted RBP	5.05	□□□□□ -1.6
LSO1	YJR005C-A	NBL1	Q3E7Y6	73 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	RAD61	Q99359	647 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	TRS33	Q99394	268 aa		5.05	□□□□□ -1.6
LSO1	YJR005C-A	CIT1	P00890	479 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	SES1	P07284	462 aa	Known RBP	5.04	□□□□□ -1.6
LSO1	YJR005C-A	SNF3	P10870	884 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	TAF13	P11747	167 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	RNR3	P21672	869 aa	Known RBP	5.04	□□□□□ -1.6
LSO1	YJR005C-A	SWI4	P25302	1093 aa	Known RBP	5.04	□□□□□ -1.6
LSO1	YJR005C-A	MDJ1	P35191	511 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	YKT6	P36015	200 aa	Known RBP	5.04	□□□□□ -1.6
LSO1	YJR005C-A	MAL31	P38156	614 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	YER130C	P39959	443 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	CSM2	P40465	213 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	NSG2	P53898	299 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	NAF1	P53919	492 aa	Known RBP	5.04	□□□□□ -1.6
LSO1	YJR005C-A	ECM23	Q02710	187 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	GDE1	Q02979	1223 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	YOR111W	Q99210	232 aa		5.04	□□□□□ -1.6
LSO1	YJR005C-A	GSC2	P40989	1895 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	CBP3	P21560	335 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	MAK31	P23059	88 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	GUT2	P32191	649 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	ASF1	P32447	279 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	ELM1	P32801	640 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	MYO3	P36006	1272 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	MRPL10	P36520	322 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	RXT2	P38255	430 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	RRM3	P38766	723 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	FAR11	P53917	953 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	HDA1	P53973	706 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	ISU1	Q03020	165 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	ATG20	Q07528	640 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	GAS5	Q08193	484 aa		5.03	□□□□□ -1.6
LSO1	YJR005C-A	GET3	Q12154	354 aa	Known RBP	5.03	□□□□□ -1.6
LSO1	YJR005C-A	DDP1	Q99321	188 aa	Known RBP	5.03	□□□□□ -1.6
LSO1	YJR005C-A	MYO1	P08964	1928 aa		5.02	□□□□□ -1.61
LSO1	YJR005C-A	GPA1	P08539	472 aa		5.02	□□□□□ -1.61
LSO1	YJR005C-A	MAK16	P10962	306 aa	Predicted RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	MBR1	P23493	339 aa		5.02	□□□□□ -1.61
LSO1	YJR005C-A	RPL8B	P29453	256 aa	Known RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	PRO3	P32263	286 aa	Known RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	SAC6	P32599	642 aa	Known RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	AFG2	P32794	780 aa		5.02	□□□□□ -1.61
LSO1	YJR005C-A	SAS3	P34218	831 aa		5.02	□□□□□ -1.61
LSO1	YJR005C-A	NOC2	P39744	710 aa	Known RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	DLD3	P39976	496 aa	Known RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	YPT11	P48559	417 aa		5.02	□□□□□ -1.61
LSO1	YJR005C-A	KRE33	P53914	1056 aa	Known RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	RPT6	Q01939	405 aa	Known RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	CRF1	Q04930	467 aa		5.02	□□□□□ -1.61
LSO1	YJR005C-A	YDR341C	Q05506	607 aa	Known RBP	5.02	□□□□□ -1.61
LSO1	YJR005C-A	FLO11	P08640	1367 aa		5.02	□□□□□ -1.61
LSO1	YJR005C-A	RPP2B	P02400	110 aa	Known RBP	5.01	□□□□□ -1.61
LSO1	YJR005C-A	MET6	P05694	767 aa	Known RBP	5.01	□□□□□ -1.61
LSO1	YJR005C-A	ATE1	P16639	503 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	MSM1	P22438	575 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	RFT1	P38206	574 aa	Predicted RBP	5.01	□□□□□ -1.61
LSO1	YJR005C-A	SHC1	P39000	512 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	CUZ1	P53899	274 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	KIN4	Q01919	800 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	TRM44	Q02648	567 aa	Known RBP	5.01	□□□□□ -1.61
LSO1	YJR005C-A	GIS4	Q04233	774 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	ESC2	Q06340	456 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	TIP41	Q12199	356 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	CLF1	Q12309	687 aa	Predicted RBP	5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms