RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W PRP5P21372 849 aaPredicted RBP7.85□□□□□ -1.15
SNU71YGR013W VBA3P25594 458 aa7.85□□□□□ -1.15
SNU71YGR013W TFC4P33339 1025 aa7.85□□□□□ -1.15
SNU71YGR013W PAN5P38787 379 aa7.85□□□□□ -1.15
SNU71YGR013W PIP2P52960 996 aa7.85□□□□□ -1.15
SNU71YGR013W SPC105P53148 917 aa7.85□□□□□ -1.15
SNU71YGR013W SCC2Q04002 1493 aa7.85□□□□□ -1.15
SNU71YGR013W HFD1Q04458 532 aa7.85□□□□□ -1.15
SNU71YGR013W IRE1P32361 1115 aa7.84□□□□□ -1.15
SNU71YGR013W YKL107WP34251 309 aa7.84□□□□□ -1.15
SNU71YGR013W RGA1P39083 1007 aa7.84□□□□□ -1.15
SNU71YGR013W XDJ1P39102 459 aa7.84□□□□□ -1.15
SNU71YGR013W MET14Q02196 202 aa7.84□□□□□ -1.15
SNU71YGR013W MTQ2Q03920 221 aaPredicted RBP7.84□□□□□ -1.15
SNU71YGR013W YBR284WP38150 797 aa7.83□□□□□ -1.16
SNU71YGR013W MSN5P52918 1224 aa7.83□□□□□ -1.16
SNU71YGR013W RPO31P04051 1460 aa7.83□□□□□ -1.16
SNU71YGR013W GAL1P04385 528 aa7.83□□□□□ -1.16
SNU71YGR013W TRZ1P36159 838 aaPredicted RBP7.83□□□□□ -1.16
SNU71YGR013W ESF2P53743 316 aaKnown RBP7.83□□□□□ -1.16
SNU71YGR013W DED1P06634 604 aaKnown RBP7.82□□□□□ -1.16
SNU71YGR013W RPT2P40327 437 aaKnown RBP7.82□□□□□ -1.16
SNU71YGR013W UBP6P43593 499 aaKnown RBP7.82□□□□□ -1.16
SNU71YGR013W SKP1P52286 194 aa7.82□□□□□ -1.16
SNU71YGR013W MPH2P0CD99 609 aa7.81□□□□□ -1.16
SNU71YGR013W SDH2P21801 266 aa7.81□□□□□ -1.16
SNU71YGR013W GSY1P23337 708 aa7.81□□□□□ -1.16
SNU71YGR013W SYP1P25623 870 aaKnown RBP7.81□□□□□ -1.16
SNU71YGR013W EXO5P38289 585 aa7.81□□□□□ -1.16
SNU71YGR013W RAT1Q02792 1006 aaKnown RBP7.81□□□□□ -1.16
SNU71YGR013W AOS1Q06624 347 aa7.81□□□□□ -1.16
SNU71YGR013W PSH1Q12161 406 aa7.81□□□□□ -1.16
SNU71YGR013W TY1A-DR3Q12441 440 aa7.81□□□□□ -1.16
SNU71YGR013W LEU1P07264 779 aaKnown RBP7.81□□□□□ -1.16
SNU71YGR013W RAD53P22216 821 aa7.81□□□□□ -1.16
SNU71YGR013W PDC6P26263 563 aaKnown RBP7.81□□□□□ -1.16
SNU71YGR013W MRF1P30775 413 aaPredicted RBP7.81□□□□□ -1.16
SNU71YGR013W HSP78P33416 811 aa7.81□□□□□ -1.16
SNU71YGR013W MET13P53128 600 aa7.81□□□□□ -1.16
SNU71YGR013W SHU2P38957 223 aa7.8□□□□□ -1.16
SNU71YGR013W YNR040WP53736 256 aa7.8□□□□□ -1.16
SNU71YGR013W MYO2P19524 1574 aaKnown RBP7.79□□□□□ -1.16
SNU71YGR013W MSD1P15179 658 aaKnown RBP7.79□□□□□ -1.16
SNU71YGR013W EST2Q06163 884 aa7.79□□□□□ -1.16
SNU71YGR013W CDC9P04819 755 aa7.79□□□□□ -1.16
SNU71YGR013W DBP5P20449 482 aaKnown RBP7.79□□□□□ -1.16
SNU71YGR013W SLA1P32790 1244 aa7.79□□□□□ -1.16
SNU71YGR013W MRS6P32864 603 aaKnown RBP7.79□□□□□ -1.16
SNU71YGR013W DOM34P33309 386 aa7.79□□□□□ -1.16
SNU71YGR013W EXO84P38261 753 aa7.79□□□□□ -1.16
SNU71YGR013W SRD1P09007 221 aa7.78□□□□□ -1.16
SNU71YGR013W SAH1P39954 449 aaKnown RBP7.78□□□□□ -1.16
SNU71YGR013W SIP5P40210 489 aaKnown RBP7.78□□□□□ -1.16
SNU71YGR013W CNN1P43618 361 aa7.78□□□□□ -1.16
SNU71YGR013W GLO4Q12320 285 aa7.78□□□□□ -1.16
SNU71YGR013W PCL2P25693 308 aa7.77□□□□□ -1.17
SNU71YGR013W PTP2P29461 750 aa7.77□□□□□ -1.17
SNU71YGR013W NFU1P32860 256 aa7.77□□□□□ -1.17
SNU71YGR013W PET10P36139 283 aa7.77□□□□□ -1.17
SNU71YGR013W AHP1P38013 176 aaKnown RBP7.77□□□□□ -1.17
SNU71YGR013W MCM7P38132 845 aa7.77□□□□□ -1.17
SNU71YGR013W IES1P43579 692 aa7.77□□□□□ -1.17
SNU71YGR013W LCB5Q06147 687 aaKnown RBP7.77□□□□□ -1.17
SNU71YGR013W HVG1P0CE11 249 aa7.77□□□□□ -1.17
SNU71YGR013W RAD18P10862 487 aa7.77□□□□□ -1.17
SNU71YGR013W HOS4P40480 1083 aa7.77□□□□□ -1.17
SNU71YGR013W YJR096WP47137 282 aa7.77□□□□□ -1.17
SNU71YGR013W RRP6Q12149 733 aaKnown RBP7.77□□□□□ -1.17
SNU71YGR013W YPR071WQ12346 211 aa7.77□□□□□ -1.17
SNU71YGR013W RRI2Q12348 645 aa7.77□□□□□ -1.17
SNU71YGR013W ERP4Q12450 207 aa7.77□□□□□ -1.17
SNU71YGR013W CHD1P32657 1468 aa7.76□□□□□ -1.17
SNU71YGR013W NIC96P34077 839 aa7.76□□□□□ -1.17
SNU71YGR013W YDR306CQ06640 478 aa7.76□□□□□ -1.17
SNU71YGR013W PHR1P05066 565 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
SNU71YGR013W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
SNU71YGR013W APA1P16550 321 aaKnown RBP7.75□□□□□ -1.17
SNU71YGR013W SSH4P32343 579 aa7.75□□□□□ -1.17
SNU71YGR013W RRP8P38961 392 aaKnown RBP7.75□□□□□ -1.17
SNU71YGR013W MPH1P40562 993 aa7.75□□□□□ -1.17
SNU71YGR013W ALG2P43636 503 aa7.75□□□□□ -1.17
SNU71YGR013W PPT1P53043 513 aa7.75□□□□□ -1.17
SNU71YGR013W MDM1Q01846 1127 aa7.75□□□□□ -1.17
SNU71YGR013W TY1A-LR4P0C2I8 440 aaKnown RBP7.75□□□□□ -1.17
SNU71YGR013W TY1A-DR6P0CX70 440 aa7.75□□□□□ -1.17
SNU71YGR013W TY1A-ER1P0CX71 440 aa7.75□□□□□ -1.17
SNU71YGR013W TY1A-LR2P0CX72 440 aa7.75□□□□□ -1.17
SNU71YGR013W TY1A-PLP0CX73 440 aa7.75□□□□□ -1.17
SNU71YGR013W TY1A-JR1P0CX74 440 aa7.75□□□□□ -1.17
SNU71YGR013W TY1A-LR3P0CX75 440 aa7.75□□□□□ -1.17
SNU71YGR013W TY1A-ML2P0CX76 440 aa7.75□□□□□ -1.17
SNU71YGR013W FUS1P11710 512 aa7.75□□□□□ -1.17
SNU71YGR013W RGP1P16664 663 aa7.75□□□□□ -1.17
SNU71YGR013W SFL1P20134 766 aa7.75□□□□□ -1.17
SNU71YGR013W PRP19P32523 503 aaKnown RBP7.75□□□□□ -1.17
SNU71YGR013W PTH2P34222 208 aa7.75□□□□□ -1.17
SNU71YGR013W YKL077WP36081 392 aa7.75□□□□□ -1.17
SNU71YGR013W GUS1P46655 708 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
SNU71YGR013W PBP1P53297 722 aaKnown RBP7.75□□□□□ -1.17
SNU71YGR013W TY1A-GR1Q12085 440 aa7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms