Protein–RNA interactions for Protein: Q9Y5H6

PCDHA8, Protocadherin alpha-8, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8Q9Y5H6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC39.28■■■■□ 3.88
PCDHA8Q9Y5H6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
PCDHA8Q9Y5H6 AL356512.1-201ENST00000607453 1739 ntBASIC38.18■■■■□ 3.7
PCDHA8Q9Y5H6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC38.14■■■■□ 3.7
PCDHA8Q9Y5H6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
PCDHA8Q9Y5H6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
PCDHA8Q9Y5H6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.91■■■■□ 3.66
PCDHA8Q9Y5H6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC37.59■■■■□ 3.61
PCDHA8Q9Y5H6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC37.3■■■■□ 3.56
PCDHA8Q9Y5H6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.22■■■■□ 3.55
PCDHA8Q9Y5H6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC37.12■■■■□ 3.53
PCDHA8Q9Y5H6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC37.09■■■■□ 3.53
PCDHA8Q9Y5H6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC36.94■■■■□ 3.5
PCDHA8Q9Y5H6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.67■■■■□ 3.46
PCDHA8Q9Y5H6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
PCDHA8Q9Y5H6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.5■■■■□ 3.43
PCDHA8Q9Y5H6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.46■■■■□ 3.43
PCDHA8Q9Y5H6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.31■■■■□ 3.4
PCDHA8Q9Y5H6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC36.23■■■■□ 3.39
PCDHA8Q9Y5H6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.16■■■■□ 3.38
PCDHA8Q9Y5H6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC36■■■■□ 3.35
PCDHA8Q9Y5H6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC35.9■■■■□ 3.34
PCDHA8Q9Y5H6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.74■■■■□ 3.31
PCDHA8Q9Y5H6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC35.63■■■■□ 3.29
PCDHA8Q9Y5H6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC35.54■■■■□ 3.28
PCDHA8Q9Y5H6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
PCDHA8Q9Y5H6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
PCDHA8Q9Y5H6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
PCDHA8Q9Y5H6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.48■■■■□ 3.27
PCDHA8Q9Y5H6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
PCDHA8Q9Y5H6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC35.47■■■■□ 3.27
PCDHA8Q9Y5H6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
PCDHA8Q9Y5H6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
PCDHA8Q9Y5H6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
PCDHA8Q9Y5H6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
PCDHA8Q9Y5H6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.12■■■■□ 3.21
PCDHA8Q9Y5H6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
PCDHA8Q9Y5H6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC35.06■■■■□ 3.2
PCDHA8Q9Y5H6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC35.06■■■■□ 3.2
PCDHA8Q9Y5H6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC35.05■■■■□ 3.2
PCDHA8Q9Y5H6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC35.04■■■■□ 3.2
PCDHA8Q9Y5H6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
PCDHA8Q9Y5H6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PCDHA8Q9Y5H6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.91■■■■□ 3.18
PCDHA8Q9Y5H6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC34.88■■■■□ 3.17
PCDHA8Q9Y5H6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
PCDHA8Q9Y5H6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
PCDHA8Q9Y5H6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.68■■■■□ 3.14
PCDHA8Q9Y5H6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
PCDHA8Q9Y5H6 AC015813.7-201ENST00000623294 581 ntBASIC34.63■■■■□ 3.13
PCDHA8Q9Y5H6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
PCDHA8Q9Y5H6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
PCDHA8Q9Y5H6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC34.47■■■■□ 3.11
PCDHA8Q9Y5H6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
PCDHA8Q9Y5H6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34.33■■■■□ 3.09
PCDHA8Q9Y5H6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC34.32■■■■□ 3.08
PCDHA8Q9Y5H6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
PCDHA8Q9Y5H6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
PCDHA8Q9Y5H6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
PCDHA8Q9Y5H6 AC006077.2-201ENST00000623591 457 ntBASIC34.2■■■■□ 3.07
PCDHA8Q9Y5H6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC34.18■■■■□ 3.06
PCDHA8Q9Y5H6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.1■■■■□ 3.05
PCDHA8Q9Y5H6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
PCDHA8Q9Y5H6 ZNRF2P1-201ENST00000441407 443 ntBASIC34.07■■■■□ 3.04
PCDHA8Q9Y5H6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC34.07■■■■□ 3.04
PCDHA8Q9Y5H6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
PCDHA8Q9Y5H6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
PCDHA8Q9Y5H6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.94■■■■□ 3.02
PCDHA8Q9Y5H6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
PCDHA8Q9Y5H6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
PCDHA8Q9Y5H6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
PCDHA8Q9Y5H6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.85■■■■□ 3.01
PCDHA8Q9Y5H6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
PCDHA8Q9Y5H6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
PCDHA8Q9Y5H6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
PCDHA8Q9Y5H6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.82■■■■□ 3.01
PCDHA8Q9Y5H6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
PCDHA8Q9Y5H6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.78■■■■□ 3
PCDHA8Q9Y5H6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
PCDHA8Q9Y5H6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
PCDHA8Q9Y5H6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.69■■■□□ 2.98
PCDHA8Q9Y5H6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.65■■■□□ 2.98
PCDHA8Q9Y5H6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC33.63■■■□□ 2.97
PCDHA8Q9Y5H6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.62■■■□□ 2.97
PCDHA8Q9Y5H6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
PCDHA8Q9Y5H6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
PCDHA8Q9Y5H6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
PCDHA8Q9Y5H6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.49■■■□□ 2.95
PCDHA8Q9Y5H6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
PCDHA8Q9Y5H6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
PCDHA8Q9Y5H6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
PCDHA8Q9Y5H6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
PCDHA8Q9Y5H6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
PCDHA8Q9Y5H6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.38■■■□□ 2.93
PCDHA8Q9Y5H6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC33.31■■■□□ 2.92
PCDHA8Q9Y5H6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC33.31■■■□□ 2.92
PCDHA8Q9Y5H6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.3■■■□□ 2.92
PCDHA8Q9Y5H6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC33.28■■■□□ 2.92
PCDHA8Q9Y5H6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
PCDHA8Q9Y5H6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms