Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.49■■■■□ 3.43
PCDHB5Q9Y5E4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
PCDHB5Q9Y5E4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.48■■■■□ 3.27
PCDHB5Q9Y5E4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
PCDHB5Q9Y5E4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
PCDHB5Q9Y5E4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
PCDHB5Q9Y5E4 AL356512.1-201ENST00000607453 1739 ntBASIC35.23■■■■□ 3.23
PCDHB5Q9Y5E4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.85■■■■□ 3.17
PCDHB5Q9Y5E4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.41■■■■□ 3.1
PCDHB5Q9Y5E4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.33■■■■□ 3.09
PCDHB5Q9Y5E4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.1■■■■□ 3.05
PCDHB5Q9Y5E4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.1■■■■□ 3.05
PCDHB5Q9Y5E4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.08■■■■□ 3.05
PCDHB5Q9Y5E4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.01■■■■□ 3.03
PCDHB5Q9Y5E4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.89■■■■□ 3.02
PCDHB5Q9Y5E4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.89■■■■□ 3.02
PCDHB5Q9Y5E4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.86■■■■□ 3.01
PCDHB5Q9Y5E4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
PCDHB5Q9Y5E4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
PCDHB5Q9Y5E4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.43■■■□□ 2.94
PCDHB5Q9Y5E4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.43■■■□□ 2.94
PCDHB5Q9Y5E4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.3■■■□□ 2.92
PCDHB5Q9Y5E4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
PCDHB5Q9Y5E4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PCDHB5Q9Y5E4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
PCDHB5Q9Y5E4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PCDHB5Q9Y5E4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
PCDHB5Q9Y5E4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
PCDHB5Q9Y5E4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.86■■■□□ 2.85
PCDHB5Q9Y5E4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
PCDHB5Q9Y5E4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
PCDHB5Q9Y5E4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
PCDHB5Q9Y5E4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.71■■■□□ 2.83
PCDHB5Q9Y5E4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
PCDHB5Q9Y5E4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.55■■■□□ 2.8
PCDHB5Q9Y5E4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCDHB5Q9Y5E4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCDHB5Q9Y5E4 AC015813.7-201ENST00000623294 581 ntBASIC32.31■■■□□ 2.76
PCDHB5Q9Y5E4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PCDHB5Q9Y5E4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
PCDHB5Q9Y5E4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PCDHB5Q9Y5E4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.21■■■□□ 2.75
PCDHB5Q9Y5E4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.19■■■□□ 2.74
PCDHB5Q9Y5E4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.14■■■□□ 2.74
PCDHB5Q9Y5E4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.14■■■□□ 2.74
PCDHB5Q9Y5E4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PCDHB5Q9Y5E4 AC006077.2-201ENST00000623591 457 ntBASIC32.07■■■□□ 2.72
PCDHB5Q9Y5E4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.03■■■□□ 2.72
PCDHB5Q9Y5E4 ZNRF2P1-201ENST00000441407 443 ntBASIC31.97■■■□□ 2.71
PCDHB5Q9Y5E4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
PCDHB5Q9Y5E4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.93■■■□□ 2.7
PCDHB5Q9Y5E4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
PCDHB5Q9Y5E4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
PCDHB5Q9Y5E4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.86■■■□□ 2.69
PCDHB5Q9Y5E4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PCDHB5Q9Y5E4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PCDHB5Q9Y5E4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PCDHB5Q9Y5E4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
PCDHB5Q9Y5E4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.62■■■□□ 2.65
PCDHB5Q9Y5E4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PCDHB5Q9Y5E4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDHB5Q9Y5E4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
PCDHB5Q9Y5E4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
PCDHB5Q9Y5E4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PCDHB5Q9Y5E4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
PCDHB5Q9Y5E4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PCDHB5Q9Y5E4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCDHB5Q9Y5E4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PCDHB5Q9Y5E4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PCDHB5Q9Y5E4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.29■■■□□ 2.6
PCDHB5Q9Y5E4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PCDHB5Q9Y5E4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.23■■■□□ 2.59
PCDHB5Q9Y5E4 AP002365.1-201ENST00000603448 772 ntBASIC31.19■■■□□ 2.58
PCDHB5Q9Y5E4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PCDHB5Q9Y5E4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PCDHB5Q9Y5E4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.12■■■□□ 2.57
PCDHB5Q9Y5E4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.11■■■□□ 2.57
PCDHB5Q9Y5E4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.09■■■□□ 2.57
PCDHB5Q9Y5E4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PCDHB5Q9Y5E4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHB5Q9Y5E4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
PCDHB5Q9Y5E4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHB5Q9Y5E4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
PCDHB5Q9Y5E4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.03■■■□□ 2.56
PCDHB5Q9Y5E4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.99■■■□□ 2.55
PCDHB5Q9Y5E4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHB5Q9Y5E4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PCDHB5Q9Y5E4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
PCDHB5Q9Y5E4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHB5Q9Y5E4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
PCDHB5Q9Y5E4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.91■■■□□ 2.54
PCDHB5Q9Y5E4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
PCDHB5Q9Y5E4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHB5Q9Y5E4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCDHB5Q9Y5E4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHB5Q9Y5E4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCDHB5Q9Y5E4 DYNLL1-208ENST00000550178 581 ntBASIC30.84■■■□□ 2.53
PCDHB5Q9Y5E4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.82■■■□□ 2.52
PCDHB5Q9Y5E4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.81■■■□□ 2.52
PCDHB5Q9Y5E4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms