Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.87■■■■□ 3.49
PCDHB8Q9UN66 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
PCDHB8Q9UN66 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.89■■■■□ 3.34
PCDHB8Q9UN66 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
PCDHB8Q9UN66 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
PCDHB8Q9UN66 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.68■■■■□ 3.3
PCDHB8Q9UN66 AL356512.1-201ENST00000607453 1739 ntBASIC35.56■■■■□ 3.28
PCDHB8Q9UN66 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.26■■■■□ 3.24
PCDHB8Q9UN66 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.71■■■■□ 3.15
PCDHB8Q9UN66 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.65■■■■□ 3.14
PCDHB8Q9UN66 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.45■■■■□ 3.11
PCDHB8Q9UN66 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
PCDHB8Q9UN66 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.41■■■■□ 3.1
PCDHB8Q9UN66 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.4■■■■□ 3.1
PCDHB8Q9UN66 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.27■■■■□ 3.08
PCDHB8Q9UN66 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.22■■■■□ 3.07
PCDHB8Q9UN66 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.18■■■■□ 3.06
PCDHB8Q9UN66 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.09■■■■□ 3.05
PCDHB8Q9UN66 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
PCDHB8Q9UN66 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
PCDHB8Q9UN66 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.69■■■□□ 2.98
PCDHB8Q9UN66 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.67■■■□□ 2.98
PCDHB8Q9UN66 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
PCDHB8Q9UN66 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
PCDHB8Q9UN66 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
PCDHB8Q9UN66 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
PCDHB8Q9UN66 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
PCDHB8Q9UN66 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
PCDHB8Q9UN66 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.22■■■□□ 2.91
PCDHB8Q9UN66 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
PCDHB8Q9UN66 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.08■■■□□ 2.89
PCDHB8Q9UN66 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
PCDHB8Q9UN66 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
PCDHB8Q9UN66 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCDHB8Q9UN66 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
PCDHB8Q9UN66 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.88■■■□□ 2.85
PCDHB8Q9UN66 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
PCDHB8Q9UN66 AC015813.7-201ENST00000623294 581 ntBASIC32.68■■■□□ 2.82
PCDHB8Q9UN66 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PCDHB8Q9UN66 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PCDHB8Q9UN66 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
PCDHB8Q9UN66 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.51■■■□□ 2.79
PCDHB8Q9UN66 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.48■■■□□ 2.79
PCDHB8Q9UN66 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.46■■■□□ 2.79
PCDHB8Q9UN66 AC006077.2-201ENST00000623591 457 ntBASIC32.45■■■□□ 2.79
PCDHB8Q9UN66 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.44■■■□□ 2.78
PCDHB8Q9UN66 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PCDHB8Q9UN66 ZNRF2P1-201ENST00000441407 443 ntBASIC32.35■■■□□ 2.77
PCDHB8Q9UN66 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
PCDHB8Q9UN66 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.28■■■□□ 2.76
PCDHB8Q9UN66 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.22■■■□□ 2.75
PCDHB8Q9UN66 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
PCDHB8Q9UN66 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.17■■■□□ 2.74
PCDHB8Q9UN66 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
PCDHB8Q9UN66 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
PCDHB8Q9UN66 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PCDHB8Q9UN66 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
PCDHB8Q9UN66 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
PCDHB8Q9UN66 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCDHB8Q9UN66 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.9■■■□□ 2.7
PCDHB8Q9UN66 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCDHB8Q9UN66 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHB8Q9UN66 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PCDHB8Q9UN66 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
PCDHB8Q9UN66 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PCDHB8Q9UN66 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PCDHB8Q9UN66 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PCDHB8Q9UN66 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.65■■■□□ 2.66
PCDHB8Q9UN66 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
PCDHB8Q9UN66 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
PCDHB8Q9UN66 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PCDHB8Q9UN66 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
PCDHB8Q9UN66 AP002365.1-201ENST00000603448 772 ntBASIC31.57■■■□□ 2.64
PCDHB8Q9UN66 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.49■■■□□ 2.63
PCDHB8Q9UN66 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PCDHB8Q9UN66 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.48■■■□□ 2.63
PCDHB8Q9UN66 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.45■■■□□ 2.63
PCDHB8Q9UN66 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.44■■■□□ 2.62
PCDHB8Q9UN66 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.42■■■□□ 2.62
PCDHB8Q9UN66 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCDHB8Q9UN66 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDHB8Q9UN66 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHB8Q9UN66 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
PCDHB8Q9UN66 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHB8Q9UN66 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.35■■■□□ 2.61
PCDHB8Q9UN66 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PCDHB8Q9UN66 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.27■■■□□ 2.6
PCDHB8Q9UN66 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PCDHB8Q9UN66 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PCDHB8Q9UN66 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
PCDHB8Q9UN66 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHB8Q9UN66 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHB8Q9UN66 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
PCDHB8Q9UN66 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCDHB8Q9UN66 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHB8Q9UN66 DYNLL1-208ENST00000550178 581 ntBASIC31.19■■■□□ 2.58
PCDHB8Q9UN66 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.17■■■□□ 2.58
PCDHB8Q9UN66 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.16■■■□□ 2.58
PCDHB8Q9UN66 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PCDHB8Q9UN66 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms