Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC40.31■■■■■ 4.04
NEK1Q96PY6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
NEK1Q96PY6 AL356512.1-201ENST00000607453 1739 ntBASIC39.45■■■■□ 3.91
NEK1Q96PY6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC39.33■■■■□ 3.89
NEK1Q96PY6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC39.04■■■■□ 3.84
NEK1Q96PY6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
NEK1Q96PY6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
NEK1Q96PY6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC38.78■■■■□ 3.8
NEK1Q96PY6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC38.72■■■■□ 3.79
NEK1Q96PY6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC38.33■■■■□ 3.73
NEK1Q96PY6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC38.33■■■■□ 3.73
NEK1Q96PY6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.31■■■■□ 3.72
NEK1Q96PY6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
NEK1Q96PY6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC37.7■■■■□ 3.63
NEK1Q96PY6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC37.68■■■■□ 3.62
NEK1Q96PY6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.5■■■■□ 3.59
NEK1Q96PY6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC37.26■■■■□ 3.55
NEK1Q96PY6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC37.2■■■■□ 3.55
NEK1Q96PY6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC37.18■■■■□ 3.54
NEK1Q96PY6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC37.09■■■■□ 3.53
NEK1Q96PY6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC37.04■■■■□ 3.52
NEK1Q96PY6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC36.96■■■■□ 3.51
NEK1Q96PY6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
NEK1Q96PY6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.91■■■■□ 3.5
NEK1Q96PY6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.9■■■■□ 3.5
NEK1Q96PY6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC36.88■■■■□ 3.49
NEK1Q96PY6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC36.87■■■■□ 3.49
NEK1Q96PY6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
NEK1Q96PY6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.45
NEK1Q96PY6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.54■■■■□ 3.44
NEK1Q96PY6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC36.47■■■■□ 3.43
NEK1Q96PY6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
NEK1Q96PY6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC36.36■■■■□ 3.41
NEK1Q96PY6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
NEK1Q96PY6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC36.21■■■■□ 3.39
NEK1Q96PY6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
NEK1Q96PY6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.11■■■■□ 3.37
NEK1Q96PY6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
NEK1Q96PY6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC36.05■■■■□ 3.36
NEK1Q96PY6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC36.02■■■■□ 3.36
NEK1Q96PY6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
NEK1Q96PY6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
NEK1Q96PY6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
NEK1Q96PY6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
NEK1Q96PY6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
NEK1Q96PY6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC35.7■■■■□ 3.31
NEK1Q96PY6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC35.68■■■■□ 3.3
NEK1Q96PY6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
NEK1Q96PY6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC35.57■■■■□ 3.29
NEK1Q96PY6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC35.57■■■■□ 3.28
NEK1Q96PY6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
NEK1Q96PY6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.5■■■■□ 3.27
NEK1Q96PY6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.5■■■■□ 3.27
NEK1Q96PY6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.5■■■■□ 3.27
NEK1Q96PY6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC35.49■■■■□ 3.27
NEK1Q96PY6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC35.45■■■■□ 3.27
NEK1Q96PY6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC35.42■■■■□ 3.26
NEK1Q96PY6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC35.42■■■■□ 3.26
NEK1Q96PY6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
NEK1Q96PY6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
NEK1Q96PY6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC35.31■■■■□ 3.24
NEK1Q96PY6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
NEK1Q96PY6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC35.27■■■■□ 3.24
NEK1Q96PY6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.19■■■■□ 3.22
NEK1Q96PY6 AC015813.7-201ENST00000623294 581 ntBASIC35.14■■■■□ 3.22
NEK1Q96PY6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
NEK1Q96PY6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC35.09■■■■□ 3.21
NEK1Q96PY6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
NEK1Q96PY6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
NEK1Q96PY6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC35.05■■■■□ 3.2
NEK1Q96PY6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
NEK1Q96PY6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
NEK1Q96PY6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
NEK1Q96PY6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC34.9■■■■□ 3.18
NEK1Q96PY6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
NEK1Q96PY6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
NEK1Q96PY6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC34.8■■■■□ 3.16
NEK1Q96PY6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
NEK1Q96PY6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC34.71■■■■□ 3.15
NEK1Q96PY6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC34.68■■■■□ 3.14
NEK1Q96PY6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
NEK1Q96PY6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
NEK1Q96PY6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34.58■■■■□ 3.13
NEK1Q96PY6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
NEK1Q96PY6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
NEK1Q96PY6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC34.54■■■■□ 3.12
NEK1Q96PY6 AC145285.7-201ENST00000614819 1539 ntBASIC34.5■■■■□ 3.11
NEK1Q96PY6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
NEK1Q96PY6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
NEK1Q96PY6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
NEK1Q96PY6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC34.45■■■■□ 3.11
NEK1Q96PY6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
NEK1Q96PY6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
NEK1Q96PY6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NEK1Q96PY6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NEK1Q96PY6 AC006077.2-201ENST00000623591 457 ntBASIC34.35■■■■□ 3.09
NEK1Q96PY6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC34.33■■■■□ 3.09
NEK1Q96PY6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC34.29■■■■□ 3.08
NEK1Q96PY6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC34.25■■■■□ 3.07
NEK1Q96PY6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms