Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.35■■■■□ 3.25
SFTPA1Q8IWL2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.58■■■■□ 3.13
SFTPA1Q8IWL2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SFTPA1Q8IWL2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
SFTPA1Q8IWL2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
SFTPA1Q8IWL2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.11■■■■□ 3.05
SFTPA1Q8IWL2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.07■■■■□ 3.04
SFTPA1Q8IWL2 AL356512.1-201ENST00000607453 1739 ntBASIC33.94■■■■□ 3.02
SFTPA1Q8IWL2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.21■■■□□ 2.91
SFTPA1Q8IWL2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.1■■■□□ 2.89
SFTPA1Q8IWL2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.09■■■□□ 2.89
SFTPA1Q8IWL2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.02■■■□□ 2.88
SFTPA1Q8IWL2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33■■■□□ 2.87
SFTPA1Q8IWL2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.92■■■□□ 2.86
SFTPA1Q8IWL2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.84■■■□□ 2.85
SFTPA1Q8IWL2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
SFTPA1Q8IWL2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
SFTPA1Q8IWL2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
SFTPA1Q8IWL2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.69■■■□□ 2.82
SFTPA1Q8IWL2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SFTPA1Q8IWL2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SFTPA1Q8IWL2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.44■■■□□ 2.78
SFTPA1Q8IWL2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
SFTPA1Q8IWL2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SFTPA1Q8IWL2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SFTPA1Q8IWL2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SFTPA1Q8IWL2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.07■■■□□ 2.72
SFTPA1Q8IWL2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SFTPA1Q8IWL2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.02■■■□□ 2.72
SFTPA1Q8IWL2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
SFTPA1Q8IWL2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SFTPA1Q8IWL2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.74■■■□□ 2.67
SFTPA1Q8IWL2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SFTPA1Q8IWL2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
SFTPA1Q8IWL2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SFTPA1Q8IWL2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.54■■■□□ 2.64
SFTPA1Q8IWL2 AC015813.7-201ENST00000623294 581 ntBASIC31.48■■■□□ 2.63
SFTPA1Q8IWL2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.46■■■□□ 2.63
SFTPA1Q8IWL2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
SFTPA1Q8IWL2 AC006077.2-201ENST00000623591 457 ntBASIC31.36■■■□□ 2.61
SFTPA1Q8IWL2 ZNRF2P1-201ENST00000441407 443 ntBASIC31.33■■■□□ 2.61
SFTPA1Q8IWL2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SFTPA1Q8IWL2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.3■■■□□ 2.6
SFTPA1Q8IWL2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
SFTPA1Q8IWL2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SFTPA1Q8IWL2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
SFTPA1Q8IWL2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SFTPA1Q8IWL2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SFTPA1Q8IWL2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SFTPA1Q8IWL2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.95■■■□□ 2.55
SFTPA1Q8IWL2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.8■■■□□ 2.52
SFTPA1Q8IWL2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SFTPA1Q8IWL2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.76■■■□□ 2.52
SFTPA1Q8IWL2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.7■■■□□ 2.5
SFTPA1Q8IWL2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SFTPA1Q8IWL2 AP002365.1-201ENST00000603448 772 ntBASIC30.6■■■□□ 2.49
SFTPA1Q8IWL2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.58■■■□□ 2.49
SFTPA1Q8IWL2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.56■■■□□ 2.48
SFTPA1Q8IWL2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SFTPA1Q8IWL2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SFTPA1Q8IWL2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.51■■■□□ 2.47
SFTPA1Q8IWL2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.49■■■□□ 2.47
SFTPA1Q8IWL2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
SFTPA1Q8IWL2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.48■■■□□ 2.47
SFTPA1Q8IWL2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SFTPA1Q8IWL2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.45■■■□□ 2.47
SFTPA1Q8IWL2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SFTPA1Q8IWL2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
SFTPA1Q8IWL2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.42■■■□□ 2.46
SFTPA1Q8IWL2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
SFTPA1Q8IWL2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
SFTPA1Q8IWL2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SFTPA1Q8IWL2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
SFTPA1Q8IWL2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SFTPA1Q8IWL2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.37■■■□□ 2.45
SFTPA1Q8IWL2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SFTPA1Q8IWL2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SFTPA1Q8IWL2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SFTPA1Q8IWL2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.28■■■□□ 2.44
SFTPA1Q8IWL2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
SFTPA1Q8IWL2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SFTPA1Q8IWL2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.23■■■□□ 2.43
SFTPA1Q8IWL2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.19■■■□□ 2.42
SFTPA1Q8IWL2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
SFTPA1Q8IWL2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SFTPA1Q8IWL2 DYNLL1-208ENST00000550178 581 ntBASIC30.17■■■□□ 2.42
SFTPA1Q8IWL2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
SFTPA1Q8IWL2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.12■■■□□ 2.41
SFTPA1Q8IWL2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.1■■■□□ 2.41
SFTPA1Q8IWL2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SFTPA1Q8IWL2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
SFTPA1Q8IWL2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SFTPA1Q8IWL2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SFTPA1Q8IWL2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.03■■■□□ 2.4
SFTPA1Q8IWL2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SFTPA1Q8IWL2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SFTPA1Q8IWL2 AL031258.1-201ENST00000623562 325 ntBASIC29.93■■■□□ 2.38
SFTPA1Q8IWL2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
SFTPA1Q8IWL2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
SFTPA1Q8IWL2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms